| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,473 | +G | intergenic (+40/‑193) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,472 | 1 | . | G | 98.8% | 570.8 / ‑0.9 | 167 | intergenic (+39/‑194) | b4555/yigM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (80/84); total (82/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 169 total aligned reads displayed.
GAACTGG‑CTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGC > NC_000913/4008398‑4008558 | aaaCTGGTCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACTGGATGACCGACGTCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATg < 2:5137555/92‑1 (MQ=255) actggg‑CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATggg > 1:2061326/5‑93 (MQ=255) ctggg‑CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGc > 2:3258484/4‑93 (MQ=255) ctggg‑CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGc < 2:414326/90‑1 (MQ=255) tggg‑CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCa < 1:4044542/91‑1 (MQ=255) ggg‑CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAg > 1:4217619/2‑93 (MQ=255) gg‑CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGt < 2:2856839/93‑1 (MQ=255) g‑CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTg < 2:3894347/93‑1 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgc < 2:6266855/93‑2 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGCAAG‑G‑CTGCATTATGGGCAGTgc > 1:2241773/1‑92 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg < 1:4886730/93‑3 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg > 1:1832504/1‑91 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg > 1:2160175/1‑91 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg < 2:4395037/93‑3 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCgcacc > 1:5509161/3‑93 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCgcacc > 1:2591349/3‑93 (MQ=255) ccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCgcacca > 1:1682782/2‑93 (MQ=255) tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGc < 2:443092/93‑1 (MQ=255) tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGc > 1:2156490/1‑93 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCg < 2:5212621/93‑1 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCg > 2:2799496/1‑93 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc < 2:4358748/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc < 1:3669804/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc < 2:1387586/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc < 2:6133189/93‑1 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCt > 1:1624860/1‑93 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCt < 2:1178316/93‑1 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt < 1:4074959/89‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 1:3102204/91‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 2:2888756/91‑1 (MQ=255) ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc > 1:2995218/2‑93 (MQ=255) ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc < 2:3794421/92‑1 (MQ=255) ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc > 2:2321542/2‑93 (MQ=255) gtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg < 2:1706613/93‑1 (MQ=255) gtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg < 1:5936064/93‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGGGCACCAGCGTCTGAAAGACCTTCATCCCgg > 2:6450103/1‑92 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg < 1:4789934/93‑1 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg > 2:234961/1‑93 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg > 2:5144414/1‑93 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg > 2:5892163/1‑93 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAgt < 2:2117644/93‑2 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt < 2:2663374/93‑1 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt < 2:975712/93‑1 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g < 1:5626457/93‑1 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g < 2:6035405/93‑1 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g < 2:3208939/93‑1 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGGCCTTCATCCCGAGCT‑gg > 2:1857379/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 1:1546250/1‑92 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga > 1:402963/1‑91 (MQ=255) aaCGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg > 2:6162777/1‑93 (MQ=255) aaCGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg < 2:4770873/93‑1 (MQ=255) aaCGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg > 2:4176227/1‑93 (MQ=255) acgacgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa > 1:1306340/1‑93 (MQ=255) acgacgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 1:2412012/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 1:4446015/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt > 1:3019064/1‑93 (MQ=255) gacgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 2:4338389/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt > 2:1748516/1‑93 (MQ=255) acgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg > 2:5834659/1‑93 (MQ=255) acgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg > 1:4063721/1‑93 (MQ=255) cgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTgg < 2:3583813/93‑1 (MQ=255) cgCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTgg < 1:5366461/93‑1 (MQ=255) gCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt < 2:5885363/93‑1 (MQ=255) ccGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa < 1:5983823/93‑1 (MQ=255) cGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc < 1:4649788/93‑1 (MQ=255) gAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTCTGGGCAATCCGCCCCAGCGTCTGAAAGACCTTCATCTCGAGCTGGAAGTGATTGGTACt > 1:5318218/1‑93 (MQ=255) gAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 1:6048341/1‑93 (MQ=255) gAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt < 2:3161757/93‑1 (MQ=255) gAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 2:4869803/1‑93 (MQ=255) aaaTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa > 2:3471036/1‑93 (MQ=255) aaaTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa > 1:3352200/1‑93 (MQ=255) aaaTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa < 1:237725/93‑1 (MQ=255) aaTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa > 2:2833463/1‑93 (MQ=255) aaTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa > 1:3853885/1‑93 (MQ=255) aaTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa > 1:3449673/1‑93 (MQ=255) aaTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa < 2:1260781/93‑1 (MQ=255) aTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt > 1:52960/1‑93 (MQ=255) aTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 2:4115529/93‑1 (MQ=255) aTGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 2:2304196/93‑1 (MQ=255) gCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc > 1:1587885/1‑93 (MQ=255) gCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc < 1:1050943/93‑1 (MQ=255) cTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 1:4084567/93‑1 (MQ=255) cTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 2:2232111/93‑1 (MQ=255) cTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc > 1:4874260/1‑93 (MQ=255) tGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg < 2:2879411/93‑1 (MQ=255) tGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg > 1:1407707/1‑93 (MQ=255) tGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg < 1:6470595/93‑1 (MQ=255) gTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga > 1:2757252/1‑93 (MQ=255) tCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac > 2:678886/1‑93 (MQ=255) gATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga < 1:279741/93‑1 (MQ=255) gATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga < 2:5894190/93‑1 (MQ=255) aTGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac > 2:6196961/1‑93 (MQ=255) ggcgggg‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc > 1:2807597/5‑93 (MQ=255) ggcgggg‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc < 2:3351338/89‑1 (MQ=255) gggg‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt > 2:5789390/2‑93 (MQ=255) gggg‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt > 1:2879800/2‑93 (MQ=255) gggg‑‑AAA‑GCCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 2:5624508/92‑1 (MQ=255) ggg‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTg > 1:5004402/1‑93 (MQ=255) ggg‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTg < 2:2113744/93‑1 (MQ=255) gg‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc < 1:5765469/93‑1 (MQ=255) | GAACTGG‑CTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGC > NC_000913/4008398‑4008558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |