| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 957330 | 278 (1.120) | 3 (0.010) | 3/180 | 32.7 | 1.1% | coding (455/1089 nt) | serC | 3‑phosphoserine aminotransferase |
| ? | NC_000913 | = 957344 | 284 (1.170) | coding (469/1089 nt) | serC | 3‑phosphoserine aminotransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/957237‑957330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaTACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACCA < NC_000913/957344‑957253 CCAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATG > 1:3168263/1‑93CCAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATG < 1:3475325/93‑1CCAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATG > 2:489491/1‑93 CAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGA > 1:4435409/1‑93 CAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGA < 2:3930514/93‑1 CAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGA > 2:5146399/1‑93 CAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGA < 2:881970/93‑1 TATGCATTATTGCCCGAATGATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTG > 1:2127199/1‑93 TATGCATTATTGCCCGAATGATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTG < 2:2127199/93‑1 CGAATGATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGC > 1:2724190/1‑93 GATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACa > 1:5302182/1‑92 GATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACC < 1:2247288/93‑1 GATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACC > 2:4161607/1‑93 ATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACCA > 1:2170521/1‑93 ATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACCA > 1:2938908/1‑93 ATACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACCA < 2:5215428/93‑1 CCAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/957237‑957330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaTACCATCGATGGTTTCATTCGGGCAATAATGCATATAAGCAGCATTATCAGAGAGTTGCCATTCACGCATTGGCTTAACCGCGCGCAGACCA < NC_000913/957344‑957253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |