New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3349258 =18 (0.070)272 (1.090) 136/184 0.1 93.8% coding (1403/2331 nt) arcB aerobic respiration sensor‑response protein
?NC_000913 = 3349263 NA (NA)coding (1398/2331 nt) arcB aerobic respiration sensor‑response protein

Only 100 of 292 total aligned reads displayed.

ACGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAG  >  NC_000913/3349166‑3349350
                                                                                            |                                                                                            
aggttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgc                                                                                              <  1:47456‑M1/1‑1 (MQ=255)
aCGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAc                                                                                              <  1:4908107/93‑1 (MQ=255)
aCGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAc                                                                                              <  1:3498404/93‑1 (MQ=255)
aCGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAc                                                                                              >  1:3358707/1‑93 (MQ=255)
aCGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAc                                                                                              >  1:19940/1‑93 (MQ=255)
 ggttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgcc                                                                                             <  1:6146770‑M1/2‑1 (MQ=255)
 ggttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgcc                                                                                             <  1:845036‑M1/2‑1 (MQ=255)
 cGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATAcc                                                                                             <  1:1768122/93‑1 (MQ=255)
   ttgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccgg                                                                                           >  1:2195211‑M1/90‑93 (MQ=255)
    tgaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggt                                                                                          >  1:258337‑M1/89‑93 (MQ=255)
    aaaGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCggg                                                                                          >  2:210050/1‑92 (MQ=255)
    aaaGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGt                                                                                          <  1:5941392/93‑1 (MQ=255)
    aaaGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGt                                                                                          <  1:4106358/93‑1 (MQ=255)
    aaaGGTTGAACCTTTCCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGt                                                                                          <  2:4181244/93‑1 (MQ=255)
     gaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg                                                                                         <  2:5924651‑M1/6‑1 (MQ=255)
     gaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg                                                                                         <  2:2504049‑M1/6‑1 (MQ=255)
     gaacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgccggtg                                                                                         <  1:365261‑M1/6‑1 (MQ=255)
      aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                        >  2:2741532‑M1/87‑93 (MQ=255)
      aacctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTgg                                                                                        <  2:5483358‑M1/7‑1 (MQ=255)
        cctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCa                                                                                      <  2:2251956‑M1/9‑1 (MQ=255)
          tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                    >  2:755527‑M1/83‑93 (MQ=255)
            tgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGtt                                                                                  >  1:5484790‑M1/81‑93 (MQ=255)
            tgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGtt                                                                                  >  1:3802642‑M1/81‑93 (MQ=255)
             gccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                 <  1:2902275‑M1/14‑1 (MQ=255)
             gccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                 >  2:476109‑M1/80‑93 (MQ=255)
             gccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                 >  1:3119767‑M1/80‑93 (MQ=255)
             gccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                 <  1:2325666‑M1/14‑1 (MQ=255)
              ccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTa                                                                                >  2:4870964‑M1/79‑93 (MQ=255)
               cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                               >  1:2129731‑M1/78‑93 (MQ=255)
               cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                               <  2:38835‑M1/16‑1 (MQ=255)
               cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                               <  1:2011117‑M1/16‑1 (MQ=255)
               cctgttcgctggtaaccgtaatatcgccgcccatattgttcgccagacgacgagaaacggcaagaccaataccagtgCCGGTGGCAGGTTTAc                                                                               >  1:6311784‑M1/78‑93 (MQ=255)
                ctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAcc                                                                              >  1:744902‑M1/77‑93 (MQ=255)
                 tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGtttaacg                                                                             <  1:4601563‑M1/18‑4 (MQ=255)
                  gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGc                                                                            <  2:2799718‑M1/19‑1 (MQ=255)
                   ttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGcc                                                                           >  2:697158‑M1/74‑93 (MQ=255)
                    tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa                                                                          <  2:793507‑M1/21‑1 (MQ=255)
                     tgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCAt                                                                         >  2:6193896‑M1/72‑93 (MQ=255)
                        tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGAc                                                                      <  1:666033‑M1/25‑1 (MQ=255)
                         ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt                                                                     <  2:377258‑M1/26‑1 (MQ=255)
                         ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt                                                                     >  2:1126924‑M1/68‑93 (MQ=255)
                          gtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTg                                                                    >  2:5083925‑M1/67‑93 (MQ=255)
                           taaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGt                                                                   >  1:5250497‑M1/66‑93 (MQ=255)
                             accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                 <  1:2694997‑M1/30‑1 (MQ=255)
                              ccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCtt                                                                <  2:1887727‑M1/31‑1 (MQ=255)
                               cgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCttt                                                               >  2:5343783‑M1/62‑93 (MQ=255)
                                gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                              >  2:895084‑M1/61‑93 (MQ=255)
                                gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                              >  1:1065848‑M1/61‑93 (MQ=255)
                                gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                              >  1:161170‑M1/61‑93 (MQ=255)
                                gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                              >  1:6189138‑M1/61‑93 (MQ=255)
                                  aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAc                                                            <  2:5447458‑M1/35‑1 (MQ=255)
                                  aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAc                                                            <  2:5054188‑M1/35‑1 (MQ=255)
                                  aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGGTTACCGCTATGACTGTCTTTCAc                                                            <  2:43821‑M1/35‑1 (MQ=255)
                                          cgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAt                                                    <  2:4094699‑M1/43‑1 (MQ=255)
                                          cgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAt                                                    >  1:496725‑M1/51‑93 (MQ=255)
                                           gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa                                                   <  1:5134802‑M1/44‑1 (MQ=255)
                                           gcccatatttttcgccagacgacgagaaacggccagaccaataccagtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa                                                   <  1:5620840‑M1/44‑1 (MQ=255)
                                              catatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                >  1:6054394‑M1/47‑93 (MQ=255)
                                               atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg                                               <  1:1201984‑M1/48‑1 (MQ=255)
                                               atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg                                               <  2:4307712‑M1/48‑1 (MQ=255)
                                                tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATgg                                              <  2:4024923‑M1/49‑1 (MQ=255)
                                                tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATgg                                              >  1:4487927‑M1/45‑93 (MQ=255)
                                                 atttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGc                                             <  2:3668521‑M1/50‑1 (MQ=255)
                                                  tttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCg                                            >  2:39255‑M1/43‑93 (MQ=255)
                                                     ttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaaa                                         >  2:3219493‑M1/40‑93 (MQ=255)
                                                     ttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGaaa                                         >  1:5297404‑M1/40‑93 (MQ=255)
                                                       cgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt                                       <  1:1350056‑M1/56‑1 (MQ=255)
                                                        gccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtt                                      <  2:2590261‑M1/57‑1 (MQ=255)
                                                           agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAattttt                                   <  1:5171623‑M1/60‑2 (MQ=255)
                                                           agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                   <  2:4582475‑M1/60‑1 (MQ=255)
                                                            gacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt                                  <  2:3641188‑M1/61‑1 (MQ=255)
                                                             acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                 <  1:4229213‑M1/62‑1 (MQ=255)
                                                               gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                               <  2:575774‑M1/64‑1 (MQ=255)
                                                               gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                               >  1:2859702‑M1/30‑93 (MQ=255)
                                                                acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTCATACATGGCGAAAATTTTATCCAg                              <  1:24278‑M1/65‑1 (MQ=255)
                                                                 cgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc                             >  1:906752‑M1/28‑93 (MQ=255)
                                                                  gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCt                            <  2:1660409‑M1/67‑1 (MQ=255)
                                                                   agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTc                           <  1:100519‑M1/68‑1 (MQ=255)
                                                                   agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTc                           <  1:1426402‑M1/68‑1 (MQ=255)
                                                                   agaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTc                           <  2:1600604‑M1/68‑1 (MQ=255)
                                                                       acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                       >  2:4789002‑M1/22‑93 (MQ=255)
                                                                       acggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATcc                       <  2:4047454‑M1/72‑1 (MQ=255)
                                                                         ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTg                     >  1:5903956‑M1/20‑93 (MQ=255)
                                                                         ggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTg                     <  2:6032797‑M1/74‑1 (MQ=255)
                                                                           ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                   <  1:4616764‑M1/76‑1 (MQ=255)
                                                                           ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                   <  2:2975488‑M1/76‑1 (MQ=255)
                                                                           ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                   >  1:5387113‑M1/18‑93 (MQ=255)
                                                                           ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                   >  1:4156056‑M1/18‑93 (MQ=255)
                                                                             agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa                 <  2:1246364‑M1/78‑1 (MQ=255)
                                                                             agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa                 <  1:2744736‑M1/78‑1 (MQ=255)
                                                                             agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa                 <  2:5128379‑M1/78‑1 (MQ=255)
                                                                               accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt               <  2:1357814‑M1/80‑1 (MQ=255)
                                                                                  aataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc            <  2:1042443‑M1/83‑1 (MQ=255)
                                                                                  aataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc            >  1:6399111‑M1/11‑93 (MQ=255)
                                                                                   ataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCg           >  2:6282114‑M1/10‑93 (MQ=255)
                                                                                    taccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGa          >  1:5050734‑M1/9‑93 (MQ=255)
                                                                                        ggtgCCGGTGGCAGGTTTACCGCCATGACTGGCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATAcc      <  1:2485334‑M1/89‑1 (MQ=255)
                                                                                         gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa     <  1:3233‑M1/90‑1 (MQ=255)
                                                                                           gCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga   >  1:3040651‑M1/2‑93 (MQ=255)
                                                                                            ccGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCagag  <  1:169505/93‑1 (MQ=255)
                                                                                            |                                                                                            
ACGTAAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAG  >  NC_000913/3349166‑3349350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.