BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,765,459	1	.	C	73.6%	265.6 / 98.2	110	intergenic (+83/‑272)	yfjO/b2632	hypothetical protein/putative GTP‑binding protein
Reads supporting (aligned to +/- strand): ref base . (19/10); new base C (19/62); total (38/72)
Fisher's exact test for biased strand distribution p-value = 8.12e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 151 total aligned reads displayed.

GGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAAT  >  NC_000913/2765367‑2765546

ggATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑a‑a                                                                                              >  2:2340356/1‑93 (MQ=255)

 gATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c                                                                                            <  2:5215486/93‑1 (MQ=255)

  aTTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c                                                                                          <  2:2679710/93‑1 (MQ=255)

  aTTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c                                                                                          <  1:1342210/93‑1 (MQ=255)

    ttttGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c‑c‑c                                                                                      <  2:1175771/93‑1 (MQ=255)

     tttGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c‑c‑cc                                                                                     >  1:6475638/1‑93 (MQ=255)

     tttGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c‑c‑cc                                                                                     <  1:1784450/93‑1 (MQ=255)

      ttGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c‑c‑ccc                                                                                    <  1:3388204/93‑1 (MQ=255)

        gAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c‑c‑ccc‑cc                                                                                 <  1:196112/93‑2 (MQ=255)

        gAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c‑c‑ccc‑cc                                                                                 <  2:3139513/93‑2 (MQ=255)

        gAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑c‑c‑c‑ccc‑cc                                                                                 <  1:2295174/93‑2 (MQ=255)

           aCTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑CAC‑CCC‑CTca                                                                               >  1:1193085/1‑93 (MQ=255)

              cttcttTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACaa                                                                            <  1:6363331/93‑1 (MQ=255)

               ttctttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑A‑A‑C‑C‑CCC‑CTCAAAAc                                                                           >  1:232776/1‑93 (MQ=255)

               ttctttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAAc                                                                           <  1:168957/93‑1 (MQ=255)

               ttctttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑CAC‑C‑CAC‑CACACaaa                                                                           >  2:1554118/1‑92 (MQ=255)

                  tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTc                                                                        <  1:3123223/93‑1 (MQ=255)

                  tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTc                                                                        <  1:2508887/93‑1 (MQ=255)

                  tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTc                                                                        <  1:3495778/93‑1 (MQ=255)

                   ttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTcc                                                                       <  2:120068/93‑1 (MQ=255)

                   ttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTcc                                                                       <  1:1443143/93‑1 (MQ=255)

                   ttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTcc                                                                       <  2:3500147/93‑1 (MQ=255)

                    tctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCt                                                                      <  1:4882509/93‑1 (MQ=255)

                    tctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCt                                                                      <  1:2618314/93‑1 (MQ=255)

                    tctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑CAC‑C‑CAC‑ATCACAATGTCCt                                                                      >  1:2899137/1‑93 (MQ=255)

                       aaaCGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCa                                                                   <  1:6400521/93‑1 (MQ=255)

                         aCGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATa                                                                 <  1:1199517/93‑1 (MQ=255)

                            aaCCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAggg                                                              <  2:5034215/93‑1 (MQ=255)

                              ccAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑CAC‑CCC‑CTCACAACGTTCTGGATAGGGaa                                                            >  1:4451877/1‑93 (MQ=255)

                                aGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAaca                                                          <  2:4027839/93‑1 (MQ=255)

                                aGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑CTC‑C‑CCC‑CTTTCAACGTCCTGCATGCGGAacc                                                          >  1:5042058/1‑92 (MQ=255)

                                 gTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAacac                                                         <  2:302021/93‑1 (MQ=255)

                                  tataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑C‑CCC‑CTCACAACTTACTCCATAGGGAacacc                                                        >  2:3064682/1‑92 (MQ=255)

                                  tataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑C‑CCC‑ATCACCACGTCCTGCACAAGGAACACg                                                        >  1:6075119/1‑93 (MQ=255)

                                  tataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑C‑CATCC‑GTCACAACGTACTGCATAGGGAACACg                                                        >  1:3560391/1‑93 (MQ=255)

                                   ataGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGt                                                       <  1:3114290/93‑1 (MQ=255)

                                    taGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑CAC‑CCG‑CTCACAACGTTATCCATAGGTAacaactt                                                      >  2:6308150/1‑89 (MQ=255)

                                      gAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGtttt                                                    <  2:2866929/93‑1 (MQ=255)

                                      gAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGtttt                                                    <  1:609039/93‑1 (MQ=255)

                                       aaTTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTc                                                   <  1:938031/93‑1 (MQ=255)

                                        aTTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTcc                                                  <  1:1783235/93‑1 (MQ=255)

                                          tCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTcccc                                                <  2:268081/93‑1 (MQ=255)

                                          tCGCCCTTTTGCCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTcccc                                                <  1:3136943/93‑1 (MQ=255)

                                           cGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCt                                               <  2:2379079/93‑1 (MQ=255)

                                             cccTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCtgt                                             <  2:4483506/93‑1 (MQ=255)

                                              ccTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCtgtg                                            <  1:897205/93‑1 (MQ=255)

                                               cTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGGTTTCACCTGTGc                                           >  1:4273088/1‑93 (MQ=255)

                                                     gCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑CAC‑C‑CCC‑CTCACCACGTGCTGCACGGGGAACACCTTTATCGCTCTGCACCCAc                                     >  2:3910760/1‑93 (MQ=255)

                                                      cATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑A‑ACC‑CTCACAACCTCCTTCATAGTGTACACGTTTTCCCCTATGCACACACg                                    >  2:6157407/1‑93 (MQ=255)

                                                      cATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACATCCTGCATCGGAAACAACCTTTCCCCTGTGCACCCAca                                    >  1:2253769/1‑92 (MQ=255)

                                                       aTGATATTAACTTGTCCAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGa                                   <  1:1573535/93‑1 (MQ=255)

                                                       aTGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑CAC‑A‑CCC‑CTCACAACGTCCTGCATAGGGAACACGGTCTACCCTGTGCACCCACGa                                   >  2:3724847/1‑93 (MQ=255)

                                                        tGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGAGAACACGTTTTCGCCTCTGCACCCACGAc                                  >  2:5610024/1‑93 (MQ=255)

                                                        tGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑CAC‑CCC‑CTCACAACGTCCTGCATAGGGAAAACGTTTTCACCTGTGCACCCACgcc                                  >  2:4500215/1‑91 (MQ=255)

                                                         gATATTAACTTGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑A‑CCC‑CTCACAACGTCCTGCATAGGGAACAAGTGTTCCCATGTGCACCCAGGACt                                 >  1:888245/1‑93 (MQ=255)

                                                           tatTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑CGC‑CCC‑CTCCCAATGTCCTGTATATGTAACACGTTTTCCGCTGTGCACTCAAGACTaa                               >  1:2990631/1‑93 (MQ=255)

                                                             ttAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑CAC‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAt                             >  2:3811519/1‑93 (MQ=255)

                                                              tAACTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAtt                            <  2:3303360/93‑1 (MQ=255)

                                                               aaCTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTAACAACGCCCTCCATAGGGAACAGGCTTTACCCTCCACAAACACGACTAAAtct                           >  1:3862314/1‑91 (MQ=255)

                                                               aaCTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑CAC‑CCC‑CTCACAACGTCCTGCATAAGGAACATGATTTCCCCTGTGCACTCACGACTCAAttt                           >  2:5889251/1‑93 (MQ=255)

                                                                aCTTGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑C‑CCC‑CTCACAACGCCCTGCATAGGGAACACGTTTTCAACTGTGCACCCACCACTCAAtctc                          >  2:5995664/1‑93 (MQ=255)

                                                                aCTTGTCCAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTc                          <  1:5065941/93‑1 (MQ=255)

                                                                aCTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTcc                         >  1:4701921/1‑93 (MQ=255)

                                                                 cTTGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTcc                         <  2:1274781/93‑1 (MQ=255)

                                                                 cTTGTCCAATAAGATTAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTcc                         <  2:2747633/93‑1 (MQ=255)

                                                                  ttGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑C‑CCC‑CTCCCAACGCCCTGCATAGGGAACACGTACTTCGCTGTGCACCCACGACTCAATTTcgc                        >  2:5723255/1‑91 (MQ=255)

                                                                  ttGTCCAATATGATCAAATAGCATTAA‑A‑C‑C‑C‑CCC‑CTCACAACGTCCGTCAGAAGGAGCACGTTTTACCCTGTGCACCCACGACTAAATTTccc                        >  2:1297097/1‑93 (MQ=255)

                                                                   tGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTcccc                       <  1:329912/93‑1 (MQ=255)

                                                                   tGTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCCTCATAGGGAAAACGCTTTCACCTGCGCACCCACGACCAAAttttacc                       >  2:2499531/1‑89 (MQ=255)

                                                                    gTCCAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTccccc                      <  1:2202031/93‑1 (MQ=255)

                                                                    gTCCAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTccccc                      <  1:4293140/93‑1 (MQ=255)

                                                                      ccAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTccccccc                    <  1:1888816/93‑1 (MQ=255)

                                                                       cAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCt                   <  1:4501244/93‑1 (MQ=255)

                                                                       cAATATGATCAAATAGCATT‑ACC‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCt                   <  2:3637973/93‑1 (MQ=255)

                                                                       cAATATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCt                   <  1:545413/93‑1 (MQ=255)

                                                                        aaTATGATCAAATAGCATTAA‑A‑C‑C‑C‑CAC‑CTCACAACGTCATGAATAGGGAACACGATTTACCCAGTGCAACCAAGACGAAATTTctccccccg                  >  2:2527009/1‑91 (MQ=255)

                                                                        aaTATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCtt                  <  2:6121816/93‑1 (MQ=255)

                                                                        aaTATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCtt                  <  1:6212587/93‑1 (MQ=255)

                                                                        aaTATGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCtt                  <  2:422908/93‑1 (MQ=255)

                                                                        aaTATGATCAAATAGCATT‑A‑A‑C‑CTC‑CCC‑CTCACAACGTCCTGCATAGGGAACACGCTTCGCCCTGTGCACCCACGACTACATTTCCCCCCCtt                  >  2:6216275/1‑93 (MQ=255)

                                                                         atatGATCAAATAGCATTAA‑A‑C‑C‑C‑CCC‑CTCACAACGTGCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTGCCCCCCttt                 >  2:15932/1‑93 (MQ=255)

                                                                         atatGATCAAATAGCATT‑A‑A‑C‑CTC‑CCC‑CTCACAACGACCTGCATAGGGGACACGATTTCACCCGGCTACCCACGTCGAAATGTCCCGCCCtta                 >  2:4360370/1‑92 (MQ=255)

                                                                          tatGATCAAATAGCATT‑A‑A‑C‑C‑C‑CCCGCTCCCAACGTCCCGCATAGGGAACACGTTTTCCCCTGCGCACCCACGACTAACTTTCCCCCCCTTTa                >  2:2749133/1‑93 (MQ=255)

                                                                           atGATCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAACTTTCCCCCCCtgtca               >  1:2421105/1‑89 (MQ=255)

                                                                             gATCAAATAGCATTAA‑A‑A‑C‑C‑CCC‑CTCACAACGGGGTGCATAGGGAACACGTTTTCCGCTGTGCAACGACGACTAAATGTGCCCCCCTCTAAAc             >  2:4398843/1‑93 (MQ=255)

                                                                               tCAAATAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTACCCCACTTTAAACtt           >  2:4250700/1‑93 (MQ=255)

                                                                                 aaaTAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTtct         <  2:4873103/93‑1 (MQ=255)

                                                                                  aaTAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTtctc        >  1:2201301/1‑93 (MQ=255)

                                                                                  aaTAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTtctc        >  1:3819007/1‑93 (MQ=255)

                                                                                  aaTAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTtctc        <  2:787195/93‑1 (MQ=255)

                                                                                   aTAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTTCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCCTTAAACTTCTCa       >  2:1890342/1‑93 (MQ=255)

                                                                                    tAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCGTGCATAGGGAACACGTTTTCCCCTGTGCACTCACGACTAACGTTCACCCCCTTTAAACTTCTCaa      >  1:3145990/1‑93 (MQ=255)

                                                                                    tAGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCACCCCCTTTAAACTTCTCaa      >  1:5870402/1‑93 (MQ=255)

                                                                                     aGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCaat     <  2:1860123/93‑1 (MQ=255)

                                                                                     aGCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACCTCTCaat     >  1:6157738/1‑93 (MQ=255)

                                                                                      gCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCaata    >  2:3721926/1‑93 (MQ=255)

                                                                                      gCATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCaata    <  2:2911550/93‑1 (MQ=255)

                                                                                       cATT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCaataa   <  2:4570908/93‑1 (MQ=255)

                                                                                        aTT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCaataat  >  2:3806351/1‑93 (MQ=255)

                                                                                        aTT‑A‑ACC‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCaataat  <  1:5173377/93‑1 (MQ=255)

GGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑A‑A‑C‑C‑C‑CCC‑CTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAAT  >  NC_000913/2765367‑2765546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`