Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,192,6470GC51.0% 25.6 / inf 384intergenic (+106/+314)b3051/b3052putative membrane protein/putative kinase
Reads supporting (aligned to +/- strand):  ref base G (105/83);  new base C (116/80);  total (221/163)
Fisher's exact test for biased strand distribution p-value = 5.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.33e-02
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 391 total aligned reads displayed.

AATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGCTGAAACGGGA  >  NC_000913/3192555‑3192739
                                                                                            |                                                                                            
   aatCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCt                                                                                           >  1:2401820/1‑93 (MQ=255)
   aatCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCt                                                                                           >  2:5184324/1‑93 (MQ=255)
    atCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTc                                                                                          <  2:2878217/93‑1 (MQ=255)
    atCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTc                                                                                          <  1:1983662/93‑1 (MQ=255)
      cccTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCgg                                                                                        >  1:191049/1‑93 (MQ=255)
      cccTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCgg                                                                                        <  1:5177712/93‑1 (MQ=255)
        cTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCgggg                                                                                      >  2:5765119/1‑93 (MQ=255)
         tGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAGAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGa                                                                                     >  2:4434658/1‑93 (MQ=255)
         tGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGa                                                                                     >  1:3156796/1‑93 (MQ=255)
         tGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGa                                                                                     >  1:5897207/1‑93 (MQ=255)
         tGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGa                                                                                     <  2:3186185/93‑1 (MQ=255)
         tGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGa                                                                                     <  1:4916075/93‑1 (MQ=255)
          ggCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGaa                                                                                    <  2:343196/93‑1 (MQ=255)
          ggCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGGGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGaa                                                                                    >  1:3180176/1‑93 (MQ=255)
          ggCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGaa                                                                                    <  2:5925538/93‑1 (MQ=255)
          ggCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGaa                                                                                    <  1:2682987/93‑1 (MQ=255)
            cccAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAgg                                                                                  <  1:2927790/93‑1 (MQ=255)
             ccAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGc                                                                                 >  1:5385950/1‑93 (MQ=255)
              cAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCa                                                                                <  1:893048/93‑1 (MQ=255)
               aaaaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaa                                                                               >  2:5843713/1‑93 (MQ=255)
               aaaaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaa                                                                               >  2:2289932/1‑93 (MQ=255)
                aaaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGGAGGCaaa                                                                              >  2:2642137/1‑93 (MQ=255)
                aaaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCACATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCaca                                                                              >  2:3082143/1‑91 (MQ=255)
                 aaaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaaaa                                                                             >  1:6030543/1‑93 (MQ=255)
                  aaGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaaaat                                                                            <  1:3819541/93‑2 (MQ=255)
                   aGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaaaatt                                                                           >  1:663095/1‑91 (MQ=255)
                   aGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCaaaatt                                                                           <  1:1648305/93‑3 (MQ=255)
                     ccGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGc                                                                         <  1:1389803/93‑1 (MQ=255)
                       ggggATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGcct                                                                       >  1:5714573/1‑91 (MQ=255)
                       ggggATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGcct                                                                       >  1:4033427/1‑91 (MQ=255)
                       ggggATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCAt                                                                       >  2:873318/1‑93 (MQ=255)
                         ggATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTct                                                                     <  2:6075315/93‑2 (MQ=255)
                           aTTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGAGCGCTCGGGGAAGGCAAAATTGCCTctgg                                                                   >  2:1989323/1‑90 (MQ=255)
                               tttATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGaaa                                                               >  1:2001932/1‑93 (MQ=255)
                               tttATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGaaa                                                               >  2:5413454/1‑93 (MQ=255)
                                 tataTCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGc                                                             >  2:360428/1‑93 (MQ=255)
                                  atatCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCa                                                            >  1:2794730/1‑93 (MQ=255)
                                   tatCTGCGTTCCGCTAACAGGTGCAATTGCTCAGGACGTTGCAGCGATTTGCGTGACCACTCGGGGAAGGCAAAATTGCCTCCGGGAAAGTAt                                                           >  1:2309303/1‑93 (MQ=255)
                                   tatCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCAt                                                           <  2:2439516/93‑1 (MQ=255)
                                   tatCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCAt                                                           >  1:1188772/1‑93 (MQ=255)
                                   tatCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCAt                                                           >  1:754586/1‑93 (MQ=255)
                                    atCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCAtt                                                          <  1:5529001/93‑1 (MQ=255)
                                    atCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCAtt                                                          >  2:2760989/1‑93 (MQ=255)
                                    atCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCAtt                                                          >  2:396019/1‑93 (MQ=255)
                                     tCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTg                                                         <  1:3316426/93‑1 (MQ=255)
                                     tCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTg                                                         >  2:2158012/1‑93 (MQ=255)
                                      cTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGc                                                        <  1:4584472/93‑1 (MQ=255)
                                      cTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGc                                                        >  2:4727777/1‑93 (MQ=255)
                                      cTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGc                                                        >  1:3249318/1‑93 (MQ=255)
                                       tGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGGATTGCg                                                       >  2:1736380/1‑93 (MQ=255)
                                         cGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCgcg                                                     >  1:148037/1‑91 (MQ=255)
                                         cGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCgcg                                                     >  1:616522/1‑91 (MQ=255)
                                          gTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCgg                                                    <  1:1068137/93‑1 (MQ=255)
                                          gTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCgg                                                    >  1:5302898/1‑93 (MQ=255)
                                          gTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTgg                                                    >  1:1014471/1‑93 (MQ=255)
                                            tCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATGGCGCgggg                                                  <  1:6298154/93‑1 (MQ=255)
                                             ccGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGt                                                 <  2:5259494/93‑1 (MQ=255)
                                                 tAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCgg                                             >  2:6440230/1‑93 (MQ=255)
                                                 tAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCgg                                             >  1:3971636/1‑93 (MQ=255)
                                                 tAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAAATGCATCAGAGAAAGCATTGAGTGGGGTCTgg                                             >  2:4869618/1‑93 (MQ=255)
                                                  aaaagGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGgc                                            >  2:62624/1‑93 (MQ=255)
                                                  aaaaaGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGgc                                            >  2:690787/1‑93 (MQ=255)
                                                   aaagGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGgcg                                           >  2:4477721/1‑93 (MQ=255)
                                                    aaggTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGgcgc                                          <  2:6317768/90‑1 (MQ=255)
                                                    aaggTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGgcgc                                          >  2:3857265/4‑93 (MQ=255)
                                                     aaGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCt                                         >  2:5677432/1‑93 (MQ=255)
                                                       gTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCtca                                       >  2:2805185/1‑93 (MQ=255)
                                                        tGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCtcat                                      <  1:5815521/93‑1 (MQ=255)
                                                        tGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCtcat                                      >  2:1628003/1‑93 (MQ=255)
                                                         gCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCtcatc                                     >  2:5030261/1‑93 (MQ=255)
                                                           aaaTGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCtcatcac                                   >  2:4593423/1‑92 (MQ=255)
                                                           aaaTGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATcaa                                   >  2:6020277/1‑93 (MQ=255)
                                                            aaTGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATcaac                                  >  1:1324594/1‑93 (MQ=255)
                                                            aaTGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATcaac                                  >  1:223836/1‑93 (MQ=255)
                                                             aTGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATcaaca                                 >  2:3003780/1‑93 (MQ=255)
                                                             aTGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATcaaca                                 >  2:554122/1‑93 (MQ=255)
                                                              tGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATcaacaa                                <  2:3719299/93‑1 (MQ=255)
                                                                ctCAGGACGTTGCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATc                              >  1:5865483/2‑93 (MQ=255)
                                                                  cAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCgg                            >  2:1335372/1‑93 (MQ=255)
                                                                   aGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCggg                           <  1:4323270/93‑1 (MQ=255)
                                                                    ggacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCgggg                          >  1:4147348/5‑93 (MQ=255)
                                                                    ggacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCgggg                          >  2:4958027/5‑93 (MQ=255)
                                                                     gttgttGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGa                         <  2:1285404/93‑1 (MQ=255)
                                                                     gtggttgCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGa                         <  2:1934887/90‑1 (MQ=255)
                                                                     gacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCTGGGTCCGGCGCTCATCAACAATCggggg                         >  1:3469373/4‑92 (MQ=255)
                                                                     gacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCggggg                         <  1:2121416/90‑2 (MQ=255)
                                                                     gacgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATGGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCggggg                         <  2:1028807/90‑2 (MQ=255)
                                                                       cgttgCAGCGTTTTGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGGCCGGCGCTCATCAACAATCggggggc                       >  1:3578540/2‑90 (MQ=255)
                                                                            cagcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTcagca                  <  1:2963878/93‑1 (MQ=255)
                                                                               cgttttGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAaggg              >  1:5040690/3‑93 (MQ=255)
                                                                               caTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTAGCGCTCATCAACAATCGGGGAGTCAGCAggg               >  2:1176219/1‑93 (MQ=255)
                                                                                gttttGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAagggg             >  1:4684053/2‑93 (MQ=255)
                                                                                cttttGGGTGACGGCTCGGGGAAGGCAAAGCTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAgggg              <  1:1750547/92‑1 (MQ=255)
                                                                                aTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAgggg              >  1:2582164/1‑93 (MQ=255)
                                                                                  tttGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCt           <  2:3269806/93‑1 (MQ=255)
                                                                                  tgtGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGc            <  1:2210458/91‑1 (MQ=255)
                                                                                     gCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGaa        >  2:4194945/1‑93 (MQ=255)
                                                                                      cGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGaaa       >  2:2743067/1‑93 (MQ=255)
                                                                                        tGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACg     <  1:4527664/93‑1 (MQ=255)
                                                                                            ggCTCTGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGCTGAAACGGGa  <  1:303421/93‑1 (MQ=255)
                                                                                            |                                                                                            
AATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGCTGAAACGGGA  >  NC_000913/3192555‑3192739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑