BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	831,133	T→C	S347P (TCG→CCG)	rhlE →	putative ATP‑dependent RNA helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	831,133	0	T	C	100.0%	858.8 / NA	250	S347P (TCG→CCG)	rhlE	putative ATP‑dependent RNA helicase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (114/136); total (114/136)

Only 100 of 261 total aligned reads displayed.

GTCGTCAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGTCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCGGGCTAT  >  NC_000913/831043‑831222

 tcgtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGc                                                                                        <  2:1166518/93‑1 (MQ=255)

  cgtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCt                                                                                       <  1:771682/93‑1 (MQ=255)

  cgtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCt                                                                                       <  2:2203371/93‑1 (MQ=255)

  cgtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCt                                                                                       >  2:2022947/1‑93 (MQ=255)

   gtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTg                                                                                      >  1:1262337/1‑93 (MQ=255)

   gtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTg                                                                                      <  2:6036075/93‑1 (MQ=255)

   gtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTg                                                                                      <  2:574845/93‑1 (MQ=255)

   gtcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTg                                                                                      <  2:132586/93‑1 (MQ=255)

    tcAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTgg                                                                                     >  1:5617482/1‑93 (MQ=255)

      aaCTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtg                                                                                   <  1:4900669/93‑1 (MQ=255)

      aaCTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtg                                                                                   <  2:2682454/93‑1 (MQ=255)

       aCTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgg                                                                                  >  2:1957811/1‑92 (MQ=255)

        cTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtg                                                                                 <  2:6352044/93‑1 (MQ=255)

        cTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtg                                                                                 <  2:4475771/93‑1 (MQ=255)

         tATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtgt                                                                                <  2:231549/93‑1 (MQ=255)

         tATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtgt                                                                                >  2:5889875/1‑93 (MQ=255)

         tATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtgt                                                                                <  2:4172244/93‑1 (MQ=255)

          aTGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtgtg                                                                               >  1:5476237/1‑93 (MQ=255)

           tGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtgtgt                                                                              <  1:2456104/93‑1 (MQ=255)

           tGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtgtgt                                                                              <  2:1410236/93‑1 (MQ=255)

           tGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCATGCGGCTGCTACCGGTGAAGCGTTGCCGCTGgtgtgtgt                                                                              <  2:4651546/93‑1 (MQ=255)

            gAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGtt                                                                             <  2:2851031/93‑1 (MQ=255)

            gAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGtt                                                                             <  2:4989574/93‑1 (MQ=255)

              aCTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTtga                                                                           <  2:349328/93‑1 (MQ=255)

               cTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTtgat                                                                          >  1:602290/1‑93 (MQ=255)

               cTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTtgat                                                                          <  1:2166514/93‑1 (MQ=255)

                 gCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTtgatga                                                                        <  2:2288031/93‑1 (MQ=255)

                   cAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAac                                                                      <  1:3285457/93‑1 (MQ=255)

                      aCGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAAcaca                                                                   >  1:1013174/1‑93 (MQ=255)

                        ctACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACaaa                                                                 <  1:3653177/92‑1 (MQ=255)

                         tACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAAc                                                                <  2:246642/93‑1 (MQ=255)

                         tACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGGGTGTTGATGAACACAAAc                                                                >  1:346648/1‑93 (MQ=255)

                          aCCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACCAAct                                                               >  1:4152435/1‑93 (MQ=255)

                          aCCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAAct                                                               >  1:5700001/1‑93 (MQ=255)

                            cTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAActgc                                                             >  2:3261306/1‑93 (MQ=255)

                            cTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAActgc                                                             >  1:1645894/1‑93 (MQ=255)

                             tGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAActgct                                                            >  2:4837106/1‑93 (MQ=255)

                             tGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAActgct                                                            >  2:5118801/1‑93 (MQ=255)

                             tGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAActgct                                                            >  2:15875/1‑93 (MQ=255)

                             tGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAActgct                                                            >  2:5350039/1‑93 (MQ=255)

                             tGAAGATTATGTCCACAGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAActgct                                                            >  1:1683616/1‑93 (MQ=255)

                               aaGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACtgctgc                                                          <  2:3847142/93‑1 (MQ=255)

                               aaGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACtgctgc                                                          <  2:1882072/93‑1 (MQ=255)

                                 gATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGt                                                        <  1:5373270/93‑1 (MQ=255)

                                  aTTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTg                                                       >  1:1058896/1‑93 (MQ=255)

                                   ttATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGa                                                      <  1:2287161/93‑1 (MQ=255)

                                    tATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGat                                                     <  1:4494981/93‑1 (MQ=255)

                                     aTGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGata                                                    <  1:3574055/93‑1 (MQ=255)

                                      tGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGatat                                                   >  1:4796034/1‑93 (MQ=255)

                                       gTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATc                                                  <  1:648820/93‑1 (MQ=255)

                                       gTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATc                                                  >  2:5515353/1‑93 (MQ=255)

                                       gTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATc                                                  >  2:5251241/1‑93 (MQ=255)

                                       gTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATc                                                  <  1:3334642/93‑1 (MQ=255)

                                       gTCCACCGTATCGGGCGTACCGGTCGTGCGCCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATc                                                  <  2:5931090/93‑1 (MQ=255)

                                       gTCCACCGTATCGAGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGATGCCTCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATc                                                  <  1:1364365/93‑1 (MQ=255)

                                        tCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCg                                                 >  2:5702105/1‑93 (MQ=255)

                                         ccACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGa                                                >  1:4854778/1‑93 (MQ=255)

                                           aCCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGcaa                                              >  2:2777801/1‑93 (MQ=255)

                                           aCCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGaaa                                              >  1:6385535/1‑93 (MQ=255)

                                           aCCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGaaa                                              >  2:1607555/1‑93 (MQ=255)

                                            ccGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGaaaa                                             >  2:351489/1‑93 (MQ=255)

                                             cGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGaaaaa                                            >  2:1221999/1‑93 (MQ=255)

                                             cGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGaaaaa                                            >  1:4599402/1‑93 (MQ=255)

                                             cGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGaaaaa                                            <  2:44160/93‑1 (MQ=255)

                                             cGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGaaaaa                                            >  1:2308124/1‑93 (MQ=255)

                                              gTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTAGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAAc                                           >  2:3442200/1‑93 (MQ=255)

                                                    ggCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGa                                     >  2:2400904/1‑93 (MQ=255)

                                                     gCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaa                                    >  2:3670707/1‑93 (MQ=255)

                                                     gCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaa                                    >  1:6262946/1‑93 (MQ=255)

                                                      cGTACCGGTCGTGCGTCTGCTTCCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATTAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaaa                                   <  1:520955/93‑1 (MQ=255)

                                                      cGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaaa                                   <  2:916150/93‑1 (MQ=255)

                                                      cGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaaa                                   >  1:1498217/1‑93 (MQ=255)

                                                      cGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaaa                                   <  1:528098/93‑1 (MQ=255)

                                                        tACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaaaaa                                 <  1:1282908/93‑1 (MQ=255)

                                                        tACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaaaaa                                 >  1:1480968/1‑93 (MQ=255)

                                                        tACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGaaaaa                                 >  2:174202/1‑93 (MQ=255)

                                                           cGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAaga                              <  2:5593528/93‑1 (MQ=255)

                                                           cGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAaga                              >  1:6070239/1‑93 (MQ=255)

                                                           cGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAaga                              <  1:2697005/93‑1 (MQ=255)

                                                           cGGTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAaga                              <  1:287234/93‑1 (MQ=255)

                                                            ggTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAagag                             >  2:310350/1‑93 (MQ=255)

                                                            ggTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAagag                             >  1:3231707/1‑93 (MQ=255)

                                                            ggTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAagag                             >  2:3862541/1‑93 (MQ=255)

                                                             gTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAgaga                            >  1:2554778/1‑93 (MQ=255)

                                                             gTCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAgaga                            <  2:3815330/93‑1 (MQ=255)

                                                              tCGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGAt                           >  2:2557764/1‑93 (MQ=255)

                                                               cGTGCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATc                          <  1:284166/93‑1 (MQ=255)

                                                                  gCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCcg                       >  2:4272735/1‑93 (MQ=255)

                                                                  gCGGCTGCTACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCcg                       <  1:5143442/93‑1 (MQ=255)

                                                                     gctgctACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCgcgc                    >  2:2906891/1‑93 (MQ=255)

                                                                       tgctACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCAt                  <  2:5202889/93‑1 (MQ=255)

                                                                       tgctACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCAt                  <  1:906010/93‑1 (MQ=255)

                                                                          tACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGc               <  2:3932601/93‑1 (MQ=255)

                                                                          tACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGc               <  2:1262337/93‑1 (MQ=255)

                                                                          tACCGGTGAAGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGc               <  2:2197121/93‑1 (MQ=255)

                                                                                  aaGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCgg       <  2:5275494/93‑1 (MQ=255)

                                                                                  aaGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCgg       <  2:4841770/93‑1 (MQ=255)

                                                                                   aGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCggg      <  2:776946/93‑1 (MQ=255)

                                                                                   aGCGTTGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCggg      <  1:3976614/93‑1 (MQ=255)

                                                                                       ttGCCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCGGGCTAt  <  1:5917574/93‑1 (MQ=255)

GTCGTCAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGTCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCGGGCTAT  >  NC_000913/831043‑831222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`