BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,010,324	A→G	T380A (ACC→GCC)	uup →	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,010,324	0	A	G	100.0%	864.5 / NA	248	T380A (ACC→GCC)	uup	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/114); total (134/114)

Only 100 of 253 total aligned reads displayed.

CTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAA  >  NC_000913/1010234‑1010413

  gATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCaa                                                                                       <  1:4489967/93‑1 (MQ=255)

   aTTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCaaa                                                                                      <  1:4311386/93‑1 (MQ=255)

        tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa                                                                                 <  1:111861/93‑1 (MQ=255)

        tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa                                                                                 >  2:4194424/1‑93 (MQ=255)

        tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa                                                                                 <  2:3519984/93‑1 (MQ=255)

        tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa                                                                                 >  2:3469976/1‑93 (MQ=255)

        tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa                                                                                 >  2:1603435/1‑93 (MQ=255)

        tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa                                                                                 <  1:3102172/93‑1 (MQ=255)

           gAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAgg                                                                              >  1:5505491/1‑92 (MQ=255)

           gAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGt                                                                              <  2:6099252/93‑1 (MQ=255)

           gAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGCATTCACGTTGGCGCCAAACTGGAAGt                                                                              >  2:1054744/1‑93 (MQ=255)

             aTGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTgg                                                                            >  2:843883/1‑93 (MQ=255)

             aTGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCAAGTTGGCGCCAAACTGGAAGTgg                                                                            >  2:5187032/1‑93 (MQ=255)

               gggTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCt                                                                          >  2:2676796/1‑93 (MQ=255)

                ggTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCtt                                                                         >  1:4987428/1‑93 (MQ=255)

                ggTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCtt                                                                         >  2:4533893/1‑93 (MQ=255)

                 gTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTa                                                                        <  2:251846/93‑1 (MQ=255)

                  tGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTAt                                                                       <  1:3952737/93‑1 (MQ=255)

                    cGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTAttt                                                                     >  2:5044695/1‑93 (MQ=255)

                     ggCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTc                                                                    >  1:5987663/1‑93 (MQ=255)

                        aaaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAt                                                                 >  1:274920/1‑93 (MQ=255)

                        aaaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAt                                                                 >  1:6216429/1‑93 (MQ=255)

                        aaaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAt                                                                 <  2:666138/93‑1 (MQ=255)

                         aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc                                                                >  2:3197728/1‑93 (MQ=255)

                         aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc                                                                >  2:6222602/1‑93 (MQ=255)

                         aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc                                                                >  2:1985197/1‑93 (MQ=255)

                         aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc                                                                <  2:1695510/93‑1 (MQ=255)

                         aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc                                                                >  1:1928881/1‑93 (MQ=255)

                          aaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCa                                                               >  1:2398599/1‑93 (MQ=255)

                          aaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCa                                                               <  1:1859771/93‑1 (MQ=255)

                             cACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCa                                                            <  2:247792/93‑1 (MQ=255)

                             cACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCa                                                            <  1:2207713/93‑1 (MQ=255)

                               cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACTTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc                                                          <  2:4646806/93‑1 (MQ=255)

                               cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc                                                          <  2:6392043/93‑1 (MQ=255)

                               cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc                                                          >  1:5742635/1‑93 (MQ=255)

                               cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGAACAGCGGGTGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc                                                          <  1:873907/93‑1 (MQ=255)

                                gctgctAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACcg                                                         >  2:5949533/1‑93 (MQ=255)

                                gctgctAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACcg                                                         <  1:814956/93‑1 (MQ=255)

                                   gctAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACcgcgc                                                      >  1:1556816/1‑93 (MQ=255)

                                     tAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCgg                                                    >  2:4425669/1‑93 (MQ=255)

                                     tAAAACTGATGCTCGGTCAGCGTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCgg                                                    <  1:2963533/93‑1 (MQ=255)

                                        aaCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAAc                                                 <  2:2249684/93‑1 (MQ=255)

                                        aaCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAAc                                                 >  1:5284590/1‑93 (MQ=255)

                                         aCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACt                                                >  1:3581885/1‑93 (MQ=255)

                                         aCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACt                                                >  2:3369390/1‑93 (MQ=255)

                                         aCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACt                                                >  1:1890519/1‑93 (MQ=255)

                                          cTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTg                                               >  2:2954780/1‑93 (MQ=255)

                                          cTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTg                                               <  2:3965857/93‑1 (MQ=255)

                                          cTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTg                                               >  1:923132/1‑93 (MQ=255)

                                           tGATGCTGCGTCAGCTTCAAGCGGACAGCGGTCGTATTCACGGTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTgg                                              <  1:582445/93‑1 (MQ=255)

                                           tGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTgg                                              <  1:735142/93‑1 (MQ=255)

                                           tGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTgg                                              >  2:3350738/1‑93 (MQ=255)

                                             aTGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTggct                                            >  1:5776518/1‑91 (MQ=255)

                                             aTGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGAt                                            <  1:2319826/93‑1 (MQ=255)

                                               gCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATcc                                          <  1:5092919/93‑1 (MQ=255)

                                               gCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATcc                                          >  2:567823/1‑93 (MQ=255)

                                               gCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATcc                                          <  2:5797362/93‑1 (MQ=255)

                                                  cGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGa                                       <  2:188088/93‑1 (MQ=255)

                                                    gTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATa                                     <  2:767146/93‑1 (MQ=255)

                                                     tCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaa                                    >  2:3842783/1‑93 (MQ=255)

                                                     tCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaa                                    >  1:2235369/1‑93 (MQ=255)

                                                     tCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaa                                    >  2:4821247/1‑93 (MQ=255)

                                                      cAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaaa                                   >  2:1367517/1‑93 (MQ=255)

                                                      cAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaaa                                   >  1:6043001/1‑93 (MQ=255)

                                                         cTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACg                                <  2:3087107/93‑1 (MQ=255)

                                                         cTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACg                                <  2:3129347/93‑1 (MQ=255)

                                                          ttCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACgg                               >  1:3648061/1‑93 (MQ=255)

                                                          ttCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACgg                               >  2:1538227/1‑93 (MQ=255)

                                                           tCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGt                              >  1:2461826/1‑93 (MQ=255)

                                                             aaGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGa                            >  1:6041831/1‑93 (MQ=255)

                                                              aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt                           >  1:3334868/1‑93 (MQ=255)

                                                              aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt                           >  2:3045050/1‑93 (MQ=255)

                                                              aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt                           <  2:427305/93‑1 (MQ=255)

                                                              aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt                           <  1:2548812/93‑1 (MQ=255)

                                                              aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt                           >  2:4085786/1‑93 (MQ=255)

                                                                  gACAGCGTGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAt                       <  1:1722686/93‑1 (MQ=255)

                                                                  gACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAt                       <  1:664023/93‑1 (MQ=255)

                                                                  gACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAt                       >  1:3458988/1‑93 (MQ=255)

                                                                   aCAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATa                      <  1:297728/93‑1 (MQ=255)

                                                                    cAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATaa                     <  1:4883780/93‑1 (MQ=255)

                                                                     aGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAATTGGATCCCGATAAAACGGTGATGGATAAc                    >  1:6353850/1‑93 (MQ=255)

                                                                      gCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAAcc                   <  2:5514170/93‑1 (MQ=255)

                                                                       cGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCt                  <  2:5869006/93‑1 (MQ=255)

                                                                       cGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCACGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCt                  <  2:4708189/93‑1 (MQ=255)

                                                                        gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt                 <  1:4692721/93‑1 (MQ=255)

                                                                        gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt                 >  2:318343/1‑93 (MQ=255)

                                                                        gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt                 <  1:3885532/93‑1 (MQ=255)

                                                                        gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt                 <  1:5043573/93‑1 (MQ=255)

                                                                            gTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCg             >  1:3754517/1‑93 (MQ=255)

                                                                               ttCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAg          <  2:3799398/93‑1 (MQ=255)

                                                                                tCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAgg         <  1:1348131/93‑1 (MQ=255)

                                                                                tCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAgg         >  1:554959/1‑93 (MQ=255)

                                                                                tCACGGTGGCGGCAAACTGGAAGTGGCTTATTTCGATCAGCCCCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAgg         <  2:4972766/93‑1 (MQ=255)

                                                                                 cACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGt        <  2:6305830/93‑1 (MQ=255)

                                                                                  aCGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAggca       >  1:1440841/1‑91 (MQ=255)

                                                                                  aCGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTa       >  1:5347231/1‑93 (MQ=255)

                                                                                  aCGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTa       >  1:1047967/1‑93 (MQ=255)

                                                                                   cGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTaa      <  2:1015889/93‑1 (MQ=255)

                                                                                     ttGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGc    <  1:1656828/93‑1 (MQ=255)

                                                                                      tGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCa   >  2:232724/1‑93 (MQ=255)

CTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAA  >  NC_000913/1010234‑1010413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`