BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,019,358	T→C	intergenic (‑82/+275)	ompA ← / ← sulA	outer membrane protein 3a/suppressor of lon

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,019,358	0	T	C	100.0%	511.4 / NA	145	intergenic (‑82/+275)	ompA/sulA	outer membrane protein 3a/suppressor of lon
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (70/75); total (70/75)

Only 100 of 146 total aligned reads displayed.

TTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCTGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTG  >  NC_000913/1019269‑1019447

tttttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCt                                                                                        <  2:1446905/93‑1 (MQ=255)

  tttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCa                                                                                      >  1:5208116/1‑93 (MQ=255)

  tttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCa                                                                                      >  1:6350734/1‑93 (MQ=255)

   ttCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCaa                                                                                     <  1:823701/93‑1 (MQ=255)

    tCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAat                                                                                    <  1:1086907/93‑1 (MQ=255)

      aTTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAatat                                                                                  >  2:696086/1‑93 (MQ=255)

         ttttGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTaa                                                                               <  2:2207802/93‑1 (MQ=255)

          tttGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAAc                                                                              >  2:3395179/1‑93 (MQ=255)

            tGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActc                                                                            <  2:5410755/93‑1 (MQ=255)

             gcgcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActct                                                                           <  1:1345931/93‑1 (MQ=255)

             gcgcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActct                                                                           >  2:5206899/1‑93 (MQ=255)

             gcgcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAActct                                                                           >  1:2987214/1‑93 (MQ=255)

             gcgcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATACTTAACCGGGGGATCCGCTCAATATTAActct                                                                           >  1:1880674/1‑93 (MQ=255)

              cgcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTa                                                                          >  1:4625381/1‑93 (MQ=255)

               gcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTAc                                                                         <  2:1759514/93‑1 (MQ=255)

               gcCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTAc                                                                         <  2:5626811/93‑1 (MQ=255)

                  tCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGa                                                                      >  1:2691217/1‑93 (MQ=255)

                  tCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGa                                                                      >  1:4395993/1‑93 (MQ=255)

                   cGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGat                                                                     <  1:5753880/93‑1 (MQ=255)

                    gTTATCATCCAAAATGCGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGata                                                                    >  2:6207783/1‑93 (MQ=255)

                    gTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGata                                                                    <  2:1238533/93‑1 (MQ=255)

                    gTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGata                                                                    >  2:894230/1‑93 (MQ=255)

                    gTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGata                                                                    >  1:5386724/1‑93 (MQ=255)

                     ttATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGatat                                                                   >  2:2415393/1‑93 (MQ=255)

                      tATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATc                                                                  <  1:4218384/93‑1 (MQ=255)

                      tATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATc                                                                  <  2:2027186/93‑1 (MQ=255)

                       atcatcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCt                                                                 <  1:901967/93‑1 (MQ=255)

                       atcatcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCt                                                                 <  2:2270895/93‑1 (MQ=255)

                         catcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTc                                                               <  1:358622/93‑1 (MQ=255)

                         catcCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTc                                                               <  2:3023952/93‑1 (MQ=255)

                            ccAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGc                                                            <  1:3009512/93‑1 (MQ=255)

                              aaaaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCtt                                                          <  2:796578/93‑1 (MQ=255)

                               aaaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTa                                                         <  2:2129246/93‑1 (MQ=255)

                               aaaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTa                                                         >  1:5870212/1‑93 (MQ=255)

                               aaaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTa                                                         <  2:5846175/93‑1 (MQ=255)

                                aaTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTAt                                                        <  2:3924709/93‑1 (MQ=255)

                                 aTACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATg                                                       <  2:723863/93‑1 (MQ=255)

                                   aCGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGcc                                                     <  2:794970/93‑1 (MQ=255)

                                   aCGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGcc                                                     <  2:6179977/93‑1 (MQ=255)

                                     gCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGa                                                   >  2:5647498/1‑93 (MQ=255)

                                      ccATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAg                                                  >  2:5144339/1‑93 (MQ=255)

                                      ccATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAg                                                  <  1:5885659/93‑1 (MQ=255)

                                       cATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGc                                                 >  2:5828751/1‑93 (MQ=255)

                                        aTGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCa                                                >  2:3506310/1‑93 (MQ=255)

                                         tGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAc                                               <  1:5827640/93‑1 (MQ=255)

                                         tGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAc                                               <  2:4205468/93‑1 (MQ=255)

                                          gAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcc                                              <  1:1111057/93‑1 (MQ=255)

                                          gAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcc                                              >  1:5255717/1‑93 (MQ=255)

                                           aaTATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAccc                                             >  2:4579040/1‑93 (MQ=255)

                                            atatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCAcccc                                            <  1:3907806/93‑1 (MQ=255)

                                             tatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCt                                           <  1:3999199/93‑1 (MQ=255)

                                             tatCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCt                                           >  2:4334043/1‑93 (MQ=255)

                                             tatCTACAACGAGATAACTCGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCt                                           <  1:2483967/93‑1 (MQ=255)

                                              atCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTT‑GGCTTATGCCGAGCACCCCTgg                                         >  2:5106288/1‑93 (MQ=255)

                                                 tcCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCg                                       >  2:404268/1‑93 (MQ=255)

                                                 tcCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCg                                       >  2:2068858/1‑93 (MQ=255)

                                                 tcCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCg                                       >  1:4657423/1‑93 (MQ=255)

                                                  ccAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGa                                      <  1:5806567/93‑1 (MQ=255)

                                                  ccAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGa                                      >  2:3708871/1‑93 (MQ=255)

                                                  ccAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGa                                      >  1:3717912/1‑93 (MQ=255)

                                                   cAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGAt                                     <  1:1812012/93‑1 (MQ=255)

                                                   cAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGAt                                     <  2:52504/93‑1 (MQ=255)

                                                   cAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGAt                                     >  1:5520821/1‑93 (MQ=255)

                                                    aaCGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATg                                    >  2:3094865/1‑93 (MQ=255)

                                                      cGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTa                                  <  1:6389074/93‑1 (MQ=255)

                                                      cGAGATAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTa                                  >  2:4836429/1‑93 (MQ=255)

                                                       gagaTAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTaa                                 <  1:1277125/93‑1 (MQ=255)

                                                        agaTAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTaaa                                <  1:1463068/93‑1 (MQ=255)

                                                        agaTAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATAACTTCGGCGTATGCCGAGCACCCCTGGCGACGTaaa                                >  1:6466220/1‑93 (MQ=255)

                                                         gaTAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAg                               >  1:4825866/1‑93 (MQ=255)

                                                         gaTAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAg                               >  2:1344299/1‑93 (MQ=255)

                                                           tAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTc                             <  2:5833054/93‑1 (MQ=255)

                                                           tAACACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTc                             <  2:3195663/93‑1 (MQ=255)

                                                            aaCACGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCt                            <  1:2559701/93‑1 (MQ=255)

                                                             acacGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTa                           >  2:841748/1‑93 (MQ=255)

                                                             acacGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTa                           >  1:5123588/1‑93 (MQ=255)

                                                              cacGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTAc                          >  2:3484908/1‑93 (MQ=255)

                                                              cacGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTAc                          >  1:48220/1‑93 (MQ=255)

                                                               acGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACa                         <  1:3047624/93‑1 (MQ=255)

                                                                cGGTTAAATCGTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACaa                        <  1:1953508/93‑1 (MQ=255)

                                                                cGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACaa                        >  2:6377159/1‑93 (MQ=255)

                                                                cGGTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACaa                        <  1:5329383/93‑1 (MQ=255)

                                                                 ggTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAAc                       >  1:692554/1‑93 (MQ=255)

                                                                 ggTTAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAAc                       >  1:2465104/1‑93 (MQ=255)

                                                                   ttAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGt                     <  2:2867033/93‑1 (MQ=255)

                                                                    tAAATCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTa                    >  2:4999594/1‑93 (MQ=255)

                                                                       aTCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGtt                 <  2:13824/93‑1 (MQ=255)

                                                                        tCCTTCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTg                >  1:4578346/1‑93 (MQ=255)

                                                                           ttCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGaaa             <  2:639509/93‑1 (MQ=255)

                                                                            tCACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGaaaa            >  2:5439071/1‑93 (MQ=255)

                                                                             cACCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAAc           >  2:1253549/1‑93 (MQ=255)

                                                                              aCCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACt          <  2:5046705/93‑1 (MQ=255)

                                                                              aCCGGGGGATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACt          >  2:3682953/1‑93 (MQ=255)

                                                                                 gggggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTAc       >  2:1613289/1‑93 (MQ=255)

                                                                                  ggggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACa      >  1:1035179/1‑93 (MQ=255)

                                                                                   gggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACaa     >  1:1475903/1‑93 (MQ=255)

                                                                                   gggATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACaa     >  1:5488199/1‑93 (MQ=255)

                                                                                     gATCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAgt   <  1:1442904/93‑1 (MQ=255)

                                                                                      aTCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCTTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAgtg  <  2:4537992/93‑1 (MQ=255)

                                                                                      aTCCGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAgtg  >  1:5907213/1‑93 (MQ=255)

TTTTTCATTTTTTGCGCCTCGTTATCATCCAAAATACGCCATGAATATCTCCAACGAGATAACACGGTTAAATCCTTCACCGGGGGATCTGCTCAATATTAACTCTACCGATATCTTCGGCTTATGCCGAGCACCCCTGGCGATGTAAAGTCTACAACGTAGTTGAAAACTTACAAGTG  >  NC_000913/1019269‑1019447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`