BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,074,187	T→C	T1307A (ACC→GCC)	putA ←	proline dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,074,187	0	T	C	100.0%	730.3 / NA	209	T1307A (ACC→GCC)	putA	proline dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/90); total (119/90)

Only 100 of 221 total aligned reads displayed.

ACGTTAAAGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGTATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGC  >  NC_000913/1074097‑1074276

 cGTTAAAGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTAGCGCCAGCGGAAGCGGCAtt                                                                                        >  1:3586073/1‑93 (MQ=255)

 cGTTAAAGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCAtt                                                                                        >  2:1512829/1‑93 (MQ=255)

   ttAAAGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTca                                                                                      <  2:3541973/93‑1 (MQ=255)

    tAAAGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTcac                                                                                     >  2:2879143/1‑93 (MQ=255)

     aaaGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGGTACCGCCAGCGGCAGCGGCATTcaca                                                                                    >  2:231078/1‑93 (MQ=255)

     aaaGATGCCGGAGGAGGTTGTAACATCCTCCGACTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTcaca                                                                                    >  2:2606428/1‑93 (MQ=255)

     aaaGATGCCGGAGGAGGTTGTAACACCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTcaca                                                                                    <  1:2270153/93‑1 (MQ=255)

      aaGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCacac                                                                                   >  2:157355/1‑93 (MQ=255)

      aaGATGCCGGAGGAGGCTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCacac                                                                                   >  1:1004419/1‑93 (MQ=255)

       aGATGCTTGAGTAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTCGCGTTACCGCCAGCGGCAGCGGCATTCACACt                                                                                  >  1:4643005/1‑93 (MQ=255)

        gATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTc                                                                                 <  2:3837852/93‑1 (MQ=255)

        gATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTc                                                                                 >  1:4122228/1‑93 (MQ=255)

        gATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTc                                                                                 <  2:2159571/93‑1 (MQ=255)

        gATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTc                                                                                 >  2:6463322/1‑93 (MQ=255)

         aTGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCa                                                                                <  1:3884484/93‑1 (MQ=255)

           gCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGc                                                                              >  1:6336315/1‑93 (MQ=255)

           gCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGc                                                                              <  1:3632036/93‑1 (MQ=255)

            ccGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCAGCATTCACACTCAGCg                                                                             >  2:246392/1‑93 (MQ=255)

             cGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGa                                                                            >  1:2115768/1‑93 (MQ=255)

                 ggaggTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGGATTCACACTCAGCGAACGc                                                                        >  1:5023981/1‑93 (MQ=255)

                 ggaggTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGc                                                                        <  2:2565459/93‑1 (MQ=255)

                 ggaggTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGc                                                                        >  1:3110961/1‑93 (MQ=255)

                  gaggTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGcc                                                                       >  2:666065/1‑92 (MQ=255)

                   gggTTGTAACATCCTCCGGCTACCTGTTTAACTTATAGTCATTAAGCTGGCGTGCCCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTc                                                                      <  2:3335589/92‑1 (MQ=255)

                   aggTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTc                                                                      <  1:5385064/93‑1 (MQ=255)

                    ggTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCg                                                                     >  2:6299599/1‑93 (MQ=255)

                     gTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGa                                                                    >  2:5414446/1‑93 (MQ=255)

                       tGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGata                                                                  <  2:6006392/93‑1 (MQ=255)

                         tAACATCCTCCGCCTACCTGTTTACCCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGAtata                                                                <  1:3657070/93‑1 (MQ=255)

                          aaCATCCTCCGTCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATAc                                                               <  2:2649560/93‑1 (MQ=255)

                           aCATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACa                                                              <  2:5088263/93‑1 (MQ=255)

                           aCATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACa                                                              >  1:2510589/1‑93 (MQ=255)

                           aCATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACa                                                              >  1:3217669/1‑93 (MQ=255)

                             aTCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGc                                                            >  1:1138538/1‑93 (MQ=255)

                             aTCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGc                                                            <  1:930659/93‑1 (MQ=255)

                              tcctccGGCTACCTGTTTAGCCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGcc                                                           <  2:683935/93‑1 (MQ=255)

                              tcctccGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGcc                                                           <  1:4443398/93‑1 (MQ=255)

                                 tccGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGtt                                                        >  1:5696397/1‑93 (MQ=255)

                                  cgggCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTCCCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTc                                                       <  2:2355585/91‑1 (MQ=255)

                                  ccGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTc                                                       <  1:2707382/93‑1 (MQ=255)

                                   cGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTcc                                                      <  2:4690035/93‑1 (MQ=255)

                                    ggCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCa                                                     >  2:5183969/1‑93 (MQ=255)

                                    ggCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCa                                                     <  1:335341/93‑1 (MQ=255)

                                    ggCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCa                                                     <  1:3159257/93‑1 (MQ=255)

                                     gCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAg                                                    >  1:5119509/1‑93 (MQ=255)

                                     gCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAg                                                    >  1:5896488/1‑93 (MQ=255)

                                        aCCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAg                                                 >  1:1760639/1‑93 (MQ=255)

                                        aCCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAg                                                 <  2:3747705/93‑1 (MQ=255)

                                        aCCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAg                                                 >  2:4313744/1‑93 (MQ=255)

                                          cTGTGTAACCTATAGTCATTAAGCTGGCGTTCCCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGa                                               <  2:4509562/93‑1 (MQ=255)

                                           tGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGat                                              >  2:245932/1‑93 (MQ=255)

                                             tttAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGatat                                            >  1:4757208/1‑93 (MQ=255)

                                             tttAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGatat                                            >  1:942906/1‑93 (MQ=255)

                                               tAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTg                                          >  2:5927506/1‑93 (MQ=255)

                                                aaCCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGc                                         <  1:2411391/93‑1 (MQ=255)

                                                 aCCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTTCt                                        >  2:1235958/1‑93 (MQ=255)

                                                  ccTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCtt                                       >  1:1394050/1‑93 (MQ=255)

                                                   cTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCttt                                      >  1:6003474/1‑93 (MQ=255)

                                                    tataGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTc                                     <  1:5811602/93‑1 (MQ=255)

                                                      taGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGc                                   <  1:1520442/93‑1 (MQ=255)

                                                       aGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGcc                                  >  2:3461813/1‑93 (MQ=255)

                                                        gTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCa                                 >  1:3920761/1‑93 (MQ=255)

                                                         tCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCAc                                <  2:1383786/93‑1 (MQ=255)

                                                         tCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCAc                                <  1:2835599/93‑1 (MQ=255)

                                                          cATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACg                               >  1:1577623/1‑93 (MQ=255)

                                                          cATTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACg                               >  1:5480211/1‑93 (MQ=255)

                                                           aTTAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACgg                              <  2:2729075/93‑1 (MQ=255)

                                                           aTTAAGCTGGCGTTACCGACAGCGGCAGCGGCATTCACACTCAGCGCACGCTCGATATAAAGCCGTTCCAGCAGGACATTCATATCGCCACgg                              >  1:4913021/1‑93 (MQ=255)

                                                            ttAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACggg                             >  1:2967651/1‑93 (MQ=255)

                                                             tAAGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCCATATACAGCCATTCCAGAAGGATATTGCTTTCGCCACGGGc                            >  1:4349309/1‑93 (MQ=255)

                                                              aaGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCa                           >  2:4194988/1‑93 (MQ=255)

                                                               aGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCaa                          >  1:5663099/1‑93 (MQ=255)

                                                               aGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCaa                          >  2:3003076/1‑93 (MQ=255)

                                                               aGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCaa                          >  2:1894131/1‑93 (MQ=255)

                                                               aGCTGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCaa                          >  2:370636/1‑93 (MQ=255)

                                                                  tGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAc                       >  2:4632088/1‑93 (MQ=255)

                                                                  tGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAc                       <  2:5473800/93‑1 (MQ=255)

                                                                  tGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAc                       >  2:6136421/1‑93 (MQ=255)

                                                                  tGGCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAc                       <  1:816040/93‑1 (MQ=255)

                                                                   ggCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAcc                      >  1:1042617/1‑93 (MQ=255)

                                                                   ggCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAcc                      >  2:574597/1‑93 (MQ=255)

                                                                   ggCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAcc                      >  1:1841193/1‑93 (MQ=255)

                                                                   ggCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAcc                      <  1:2562493/93‑1 (MQ=255)

                                                                    gCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATGCAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAccc                     <  1:3673598/93‑1 (MQ=255)

                                                                    gCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAccc                     >  2:1490721/1‑93 (MQ=255)

                                                                    gCGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAAccc                     <  2:5673857/93‑1 (MQ=255)

                                                                     cGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCt                    <  2:75706/93‑1 (MQ=255)

                                                                     cGTTACCGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCt                    <  1:4005284/93‑1 (MQ=255)

                                                                          ccGCCAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCAcc               >  2:3933895/1‑93 (MQ=255)

                                                                             ccAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGaa            >  1:5555384/1‑93 (MQ=255)

                                                                             ccAGCGGCAGCGGCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGaa            >  1:2097656/1‑93 (MQ=255)

                                                                              cagcggcagcggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGaaa           >  1:1437525/1‑93 (MQ=255)

                                                                               agcggcagcggcATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAAc          <  1:5754198/93‑1 (MQ=255)

                                                                                 cggcagcggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACaa        >  1:2243553/1‑93 (MQ=255)

                                                                                  ggcagcggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAAt       >  1:3556574/1‑93 (MQ=255)

                                                                                  ggcagcggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAAt       <  2:6058207/93‑1 (MQ=255)

                                                                                   gcagcggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAAtt      >  2:4988669/1‑93 (MQ=255)

                                                                                      gcggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATtgtg   >  2:5249743/1‑93 (MQ=255)

                                                                                      gcggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATtgtg   >  1:1661292/1‑93 (MQ=255)

                                                                                       cggCATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGc  <  2:5561903/93‑1 (MQ=255)

ACGTTAAAGATGCCGGAGGAGGTTGTAACATCCTCCGGCTACCTGTTTAACCTATAGTCATTAAGCTGGCGTTACCGCCAGCGGCAGCGGTATTCACACTCAGCGAACGCTCGATATACAGCCGTTCCAGAAGGATATTGCTTTCGCCACGGGCAAAACCCTGCACCGAAACAATTGTGC  >  NC_000913/1074097‑1074276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`