BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,202,871	A→G	E131E (GAA→GAG)	ymfL →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,202,871	0	A	G	100.0%	797.6 / NA	228	E131E (GAA→GAG)	ymfL	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/108); total (120/108)

Only 100 of 232 total aligned reads displayed.

CGATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTG  >  NC_000913/1202781‑1202960

cGATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCCAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGcc                                                                                         >  1:2843629/1‑93 (MQ=255)

 gATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCg                                                                                        >  2:4219093/1‑93 (MQ=255)

   tatTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCa                                                                                      >  2:6078924/1‑93 (MQ=255)

    atTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCAt                                                                                     <  1:517319/93‑1 (MQ=255)

     ttAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATg                                                                                    <  1:5707149/93‑1 (MQ=255)

     ttAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATg                                                                                    <  1:2108763/93‑1 (MQ=255)

        aCCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATgaga                                                                                 <  2:3980264/93‑1 (MQ=255)

         ccAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaa                                                                                >  1:4570951/1‑93 (MQ=255)

         ccAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaa                                                                                <  1:5983208/93‑1 (MQ=255)

          cAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaag                                                                               <  2:3202196/93‑1 (MQ=255)

          cAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaag                                                                               <  2:1482488/93‑1 (MQ=255)

          cAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaag                                                                               >  1:2318762/1‑93 (MQ=255)

          cAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaag                                                                               <  1:1625063/93‑1 (MQ=255)

           aGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGagaaga                                                                              >  2:3385875/1‑93 (MQ=255)

              gTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGGCGCATGAGAAGACAg                                                                           >  1:4700772/1‑93 (MQ=255)

              gTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAg                                                                           <  2:1293887/93‑1 (MQ=255)

                 tgctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCaa                                                                        >  2:4389649/1‑93 (MQ=255)

                 tgctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCaa                                                                        <  1:5023474/93‑1 (MQ=255)

                   ctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAAtt                                                                      <  1:2622295/93‑1 (MQ=255)

                   ctgGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAAtt                                                                      <  2:4625130/93‑1 (MQ=255)

                    tgGAAGTCATTGAACAGATCGGCGGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGAGAGCAATTa                                                                     >  1:2862893/1‑93 (MQ=255)

                     ggAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTaa                                                                    <  1:2647629/93‑1 (MQ=255)

                     ggAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTaa                                                                    <  2:1376221/93‑1 (MQ=255)

                     ggAAGTCATTGAACAGATCGGCAGGTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTaa                                                                    >  2:4051714/1‑93 (MQ=255)

                      gAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAac                                                                   >  1:645288/1‑93 (MQ=255)

                      gAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAac                                                                   >  2:4309725/1‑93 (MQ=255)

                        aGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAacga                                                                 >  2:1570113/1‑93 (MQ=255)

                          tCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAacgacg                                                               <  2:663083/93‑1 (MQ=255)

                           cATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAAcgacga                                                              <  2:5104587/93‑1 (MQ=255)

                            aTTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAg                                                             >  2:1341125/1‑93 (MQ=255)

                             ttGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGc                                                            <  2:1102830/93‑1 (MQ=255)

                             ttGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGc                                                            >  2:2954221/1‑93 (MQ=255)

                             ttGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGc                                                            <  1:4542968/93‑1 (MQ=255)

                              tGAACATATCGGCAGTTATTCAAAACAGATTCGTGCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCt                                                           <  2:5007841/93‑1 (MQ=255)

                              tGAACAGAGCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCt                                                           <  1:5664635/93‑1 (MQ=255)

                               gaccAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTg                                                          <  2:492689/90‑1 (MQ=255)

                                aaCAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGt                                                         >  1:4779381/1‑93 (MQ=255)

                                 aCAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTa                                                        >  1:4881803/1‑93 (MQ=255)

                                    gATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtct                                                     >  2:308863/1‑93 (MQ=255)

                                    gATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtct                                                     >  1:3792190/1‑93 (MQ=255)

                                    gATCGGCAGTTATTAAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtct                                                     >  1:2214574/1‑93 (MQ=255)

                                     aTCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtctc                                                    <  2:3817748/93‑1 (MQ=255)

                                      tCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtctct                                                   >  2:5069230/1‑93 (MQ=255)

                                      tCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtctct                                                   <  2:1684310/93‑1 (MQ=255)

                                       cGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTAtctctc                                                  <  2:5260836/93‑1 (MQ=255)

                                         gCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCaa                                                >  1:4014265/1‑93 (MQ=255)

                                         gCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCaa                                                >  1:3899134/1‑93 (MQ=255)

                                         gCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCaa                                                >  1:1286175/1‑93 (MQ=255)

                                          cAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAt                                               <  1:1918940/93‑1 (MQ=255)

                                           aGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAtt                                              >  2:2754171/1‑93 (MQ=255)

                                           aGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAtt                                              >  2:3124754/1‑93 (MQ=255)

                                            gTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAttt                                             >  1:4919910/1‑93 (MQ=255)

                                            gTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAttt                                             >  2:2177815/1‑93 (MQ=255)

                                            gTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAAttt                                             >  2:5920725/1‑93 (MQ=255)

                                             ttATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTc                                            <  2:6290717/93‑1 (MQ=255)

                                              tATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCg                                           >  1:6233940/1‑93 (MQ=255)

                                                ttCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGaa                                         >  2:4652819/1‑93 (MQ=255)

                                                  cAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGc                                       <  1:793605/93‑1 (MQ=255)

                                                  cAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGc                                       <  1:3098013/93‑1 (MQ=255)

                                                   aaaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCt                                      >  2:3847577/1‑93 (MQ=255)

                                                   aaaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCt                                      >  1:2728104/1‑93 (MQ=255)

                                                    aaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTg                                     >  1:5837154/1‑93 (MQ=255)

                                                    aaaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTg                                     >  1:5230728/1‑93 (MQ=255)

                                                     aaCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGc                                    >  1:2293558/1‑93 (MQ=255)

                                                      aCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCa                                   <  1:6466723/93‑1 (MQ=255)

                                                      aCAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCa                                   >  1:2974872/1‑93 (MQ=255)

                                                       cAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAg                                  <  2:5844655/93‑1 (MQ=255)

                                                        aGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAgg                                 <  1:1023788/93‑1 (MQ=255)

                                                         gATTCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAACTTGCAGGa                                >  1:943021/1‑93 (MQ=255)

                                                            tCGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCa                             <  1:5094025/93‑1 (MQ=255)

                                                             cGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCAt                            <  2:4527639/93‑1 (MQ=255)

                                                             cGTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCAt                            <  1:4172243/93‑1 (MQ=255)

                                                              gTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATg                           <  1:1075368/93‑1 (MQ=255)

                                                              gTTCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATg                           >  1:4093694/1‑93 (MQ=255)

                                                               ttCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgc                          <  2:849408/93‑1 (MQ=255)

                                                               ttCAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATga                          >  1:2338285/1‑92 (MQ=255)

                                                                 cAGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcag                        >  1:423455/1‑93 (MQ=255)

                                                                  aGCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcagc                       >  1:5103158/1‑93 (MQ=255)

                                                                   gCAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATgcagca                      >  1:1518019/1‑93 (MQ=255)

                                                                    cAATCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCAc                     <  1:3246676/93‑1 (MQ=255)

                                                                     aaTCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACt                    >  2:5363109/1‑93 (MQ=255)

                                                                     aaTCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACt                    >  2:4674611/1‑93 (MQ=255)

                                                                     aaTCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACt                    <  1:3780962/93‑1 (MQ=255)

                                                                       tCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACttt                  >  1:951793/1‑92 (MQ=255)

                                                                       tCGAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTg                  <  2:5386154/93‑1 (MQ=255)

                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc                >  2:2154659/1‑93 (MQ=255)

                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTc                >  2:4139435/1‑93 (MQ=255)

                                                                         gAAGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATACAGCACTTggc                >  2:2616148/1‑91 (MQ=255)

                                                                           aGACGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTa              >  1:2065932/1‑93 (MQ=255)

                                                                             aCGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACa            >  1:5419970/1‑93 (MQ=255)

                                                                              cGGTGTAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACaa           <  1:5321540/93‑1 (MQ=255)

                                                                                gtgtAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACaaaa         >  1:612368/1‑93 (MQ=255)

                                                                                  gtAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAtt       >  2:4747318/1‑93 (MQ=255)

                                                                                   tAGTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAttt      >  2:3545654/1‑93 (MQ=255)

                                                                                     gTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAttttt    >  2:5013283/1‑93 (MQ=255)

                                                                                     gTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAttttt    >  2:5126324/1‑93 (MQ=255)

                                                                                     gTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAttttt    >  1:28919/1‑93 (MQ=255)

                                                                                     gTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAttttt    <  2:2839096/93‑1 (MQ=255)

                                                                                     gTGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAttttt    >  1:1998021/1‑93 (MQ=255)

                                                                                      tGGAGCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAAtttttt   >  2:3536662/1‑93 (MQ=255)

CGATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTG  >  NC_000913/1202781‑1202960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`