BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,210,786	A→G	intergenic (+384/+117)	mcrA → / ← ycgW	McrA/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,210,786	0	A	G	100.0%	651.1 / NA	188	intergenic (+384/+117)	mcrA/ycgW	McrA/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (76/112); total (76/112)

Only 100 of 193 total aligned reads displayed.

GCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAG  >  NC_000913/1210696‑1210874

gcAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGatcgtc                                                                                        <  1:2585233/93‑1 (MQ=255)

 caatcaatGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGAtcgtcg                                                                                       >  1:2985981/1‑93 (MQ=255)

   atcaatGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGaa                                                                                     <  2:3592660/93‑1 (MQ=255)

       atGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACa                                                                                 >  2:2005092/1‑93 (MQ=255)

       atGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACa                                                                                 <  1:4629507/93‑1 (MQ=255)

       atGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACa                                                                                 <  1:5969577/93‑1 (MQ=255)

        tGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACAt                                                                                <  1:1030391/93‑1 (MQ=255)

           cAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTa                                                                             >  2:4090915/1‑93 (MQ=255)

           cAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTa                                                                             >  2:5544750/1‑93 (MQ=255)

           cAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTa                                                                             <  1:3803767/93‑1 (MQ=255)

           cAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTa                                                                             >  1:1564359/1‑93 (MQ=255)

            aaGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATTGTCGAAAACATGTaa                                                                            <  1:2335172/93‑1 (MQ=255)

             aGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAAt                                                                           >  2:3825940/1‑93 (MQ=255)

              gACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAAtc                                                                          <  2:2181974/93‑1 (MQ=255)

               aCCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAAtct                                                                         >  1:3515473/1‑93 (MQ=255)

                ccGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAAtctc                                                                        <  1:4214477/93‑1 (MQ=255)

                 cGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAAtctct                                                                       >  2:3309428/1‑93 (MQ=255)

                  gTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAAtctctc                                                                      <  2:3711780/93‑1 (MQ=255)

                  gTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAAtctctc                                                                      <  1:1269872/93‑1 (MQ=255)

                    aaCTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCa                                                                    >  1:3437968/1‑93 (MQ=255)

                    aaCTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCa                                                                    <  1:4191756/93‑1 (MQ=255)

                       ttATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCAtgt                                                                 <  1:6412853/93‑1 (MQ=255)

                         aTGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATgtgt                                                               >  2:531600/1‑93 (MQ=255)

                         aTGACTTCGAACGTCTGATGCAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATgtgt                                                               <  2:3793144/93‑1 (MQ=255)

                           gACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTa                                                             <  1:5605635/93‑1 (MQ=255)

                           gACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTa                                                             >  2:185354/1‑93 (MQ=255)

                            aCTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTaa                                                            >  1:2434266/1‑93 (MQ=255)

                             cTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTaaa                                                           <  2:4117433/93‑1 (MQ=255)

                             cTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTaaa                                                           <  2:4929306/93‑1 (MQ=255)

                              ttCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAat                                                          >  1:3715916/1‑93 (MQ=255)

                                cGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTTGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAatat                                                        >  2:4395271/1‑93 (MQ=255)

                                cGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAatat                                                        <  1:1056321/93‑1 (MQ=255)

                                 gAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATAtt                                                       >  2:3057769/1‑93 (MQ=255)

                                    cGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGaa                                                    >  1:5099077/1‑93 (MQ=255)

                                      tCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAAc                                                  <  2:3935393/93‑1 (MQ=255)

                                        tGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACgg                                                >  1:4341379/1‑93 (MQ=255)

                                        tGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACgg                                                >  2:3482387/1‑93 (MQ=255)

                                         gATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGACAACATGTAATCTCTCCATGTGCTAAATAATGAAACgcg                                               >  2:5609595/1‑91 (MQ=21)

                                         gATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACggg                                               >  2:4741559/1‑93 (MQ=255)

                                         gATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACggg                                               >  2:29746/1‑93 (MQ=255)

                                         gATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACggg                                               >  1:1386858/1‑93 (MQ=255)

                                          aTGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACgggg                                              >  1:684807/1‑92 (MQ=255)

                                          aTGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGc                                              <  2:6202171/93‑1 (MQ=255)

                                          aTGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGc                                              <  1:4939513/93‑1 (MQ=255)

                                            ggAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGTAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGt                                            <  2:3450372/93‑1 (MQ=255)

                                            ggAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGt                                            <  2:6367195/93‑1 (MQ=255)

                                             gAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGta                                           >  1:2182704/1‑93 (MQ=255)

                                             gAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGta                                           <  1:2206150/93‑1 (MQ=255)

                                             gAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGta                                           <  2:5173990/93‑1 (MQ=255)

                                             gAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGta                                           <  2:4426872/93‑1 (MQ=255)

                                              aaGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGtat                                          >  2:1913819/1‑93 (MQ=255)

                                               aGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGtata                                         >  2:893359/1‑93 (MQ=255)

                                               aGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGtata                                         <  1:3965463/93‑1 (MQ=255)

                                                ggCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATaa                                        <  1:5836078/93‑1 (MQ=255)

                                                 gcgcTAAGCGGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAac                                       <  1:5754012/93‑1 (MQ=255)

                                                  cgcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAaca                                      <  1:1755603/93‑1 (MQ=255)

                                                   gcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAacac                                     >  1:581920/1‑93 (MQ=255)

                                                   gcTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAacac                                     <  2:2776785/93‑1 (MQ=255)

                                                    cTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACg                                    >  2:6406145/1‑93 (MQ=255)

                                                    cTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACg                                    >  2:4011214/1‑93 (MQ=255)

                                                     tAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGc                                   >  1:1311304/1‑93 (MQ=255)

                                                      aaGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGcc                                  >  2:4549040/1‑93 (MQ=255)

                                                      aaGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGcc                                  <  1:3324424/93‑1 (MQ=255)

                                                      aaGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGcc                                  <  1:2352628/93‑1 (MQ=255)

                                                       aGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGccc                                 >  2:141192/1‑93 (MQ=255)

                                                       aGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGccc                                 >  1:4495/1‑93 (MQ=255)

                                                         ctgctgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgt                               >  2:4776227/1‑93 (MQ=255)

                                                         ctgctgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgt                               >  2:2922317/1‑93 (MQ=255)

                                                          tgctgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgtt                              <  2:5455300/93‑1 (MQ=255)

                                                          tgctgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgtt                              <  2:1751289/93‑1 (MQ=255)

                                                          cgctgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCGCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgtt                              <  1:4732976/92‑1 (MQ=255)

                                                           gctgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgttg                             <  2:468088/93‑1 (MQ=255)

                                                            ctgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgttgt                            <  2:2151216/93‑1 (MQ=255)

                                                             tgAAATGTTCAGAGTTTGGTGACGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgttgtt                           <  1:6479145/93‑1 (MQ=255)

                                                             tgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgttgtt                           <  2:5889500/93‑1 (MQ=255)

                                                             tgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgttgtt                           >  1:5892824/1‑93 (MQ=255)

                                                             tgAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCgttgtt                           <  2:67601/93‑1 (MQ=255)

                                                              gAAATGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGttt                          <  2:2803037/93‑1 (MQ=255)

                                                               aaaTGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGtttt                         <  1:922200/93‑1 (MQ=255)

                                                                aaTGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTttta                        <  2:2638313/93‑1 (MQ=255)

                                                                  tGTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTtttatt                      <  2:5221458/93‑1 (MQ=255)

                                                                   gTTCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTtttattt                     <  1:1817754/93‑1 (MQ=255)

                                                                    ttCAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTtttattta                    <  1:2926695/93‑1 (MQ=255)

                                                                      cAGAGTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTAtg                  <  2:165094/93‑1 (MQ=255)

                                                                       agagTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTAtgt                 >  1:5253649/1‑93 (MQ=255)

                                                                       agagTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTAtgt                 <  2:230983/93‑1 (MQ=255)

                                                                          gTTTGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGa              <  2:1544398/93‑1 (MQ=255)

                                                                           tttGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGat             >  1:5185227/1‑93 (MQ=255)

                                                                            ttGGTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGata            <  2:5386719/93‑1 (MQ=255)

                                                                              ggTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGAtatt          <  1:4584620/93‑1 (MQ=255)

                                                                              ggTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGAtatt          <  1:1870364/93‑1 (MQ=255)

                                                                               gTGAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGAtatta         <  2:240625/93‑1 (MQ=255)

                                                                                 gAAGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATattatt       <  1:3043772/93‑1 (MQ=255)

                                                                                  aaGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATAttatta      >  1:2034646/1‑93 (MQ=255)

                                                                                   aGCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTaa     >  2:374878/1‑93 (MQ=255)

                                                                                    gCGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAAt    <  2:4898426/93‑1 (MQ=255)

                                                                                     cGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATa   <  1:4262333/93‑1 (MQ=255)

                                                                                     cGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATa   <  1:253255/93‑1 (MQ=255)

                                                                                     cGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATa   <  1:5292834/93‑1 (MQ=255)

                                                                                     cGATCGTCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATa   >  1:6160098/1‑93 (MQ=255)

GCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAG  >  NC_000913/1210696‑1210874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`