BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,323,486	C→T	S239S (AGC→AGT)	yciQ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,323,486	0	C	T	100.0%	1111.1 / NA	286	S239S (AGC→AGT)	yciQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (148/138); total (148/138)

Only 100 of 289 total aligned reads displayed.

GTTTTATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGCCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAGCGCAG  >  NC_000913/1323396‑1323575

gTTTTATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCa                                                                                         >  1:5347837/1‑93 (MQ=255)

gTTTTATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCa                                                                                         <  1:4083/93‑1 (MQ=255)

 ttttATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAt                                                                                        >  2:3355705/1‑93 (MQ=255)

   ttATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtct                                                                                      <  2:3584489/93‑1 (MQ=255)

   ttATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtct                                                                                      <  1:3021275/93‑1 (MQ=255)

   ttATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtct                                                                                      >  2:3246466/1‑93 (MQ=255)

    tATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtctt                                                                                     >  1:2285203/1‑93 (MQ=255)

     aTCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtcttc                                                                                    >  2:1863582/1‑93 (MQ=255)

     aTCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtcttc                                                                                    >  1:4264766/1‑93 (MQ=255)

     aTCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtcttc                                                                                    >  1:3513391/1‑93 (MQ=255)

      tCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCAtcttct                                                                                   <  1:921927/93‑1 (MQ=255)

       cGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATcttctt                                                                                  >  2:552908/1‑93 (MQ=255)

       cGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATcttctt                                                                                  <  2:5213424/93‑1 (MQ=255)

             gATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTAccc                                                                            <  1:5413490/93‑1 (MQ=255)

             gATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTAccc                                                                            >  1:1878787/1‑93 (MQ=255)

             gATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTAccc                                                                            >  2:2845734/1‑93 (MQ=255)

               tttCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTc                                                                          <  2:1971669/93‑1 (MQ=255)

                   aCGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACg                                                                      >  2:1731350/1‑93 (MQ=255)

                    cGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGt                                                                     >  1:3233947/1‑93 (MQ=255)

                     ggTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTc                                                                    >  1:470188/1‑93 (MQ=255)

                      gTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCa                                                                   >  1:5917325/1‑93 (MQ=255)

                       tCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCAt                                                                  >  1:633144/1‑93 (MQ=255)

                        ccTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATc                                                                 >  1:1463782/1‑93 (MQ=255)

                            tACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCgttg                                                             >  1:5997533/1‑93 (MQ=255)

                             aCCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCgttgt                                                            <  1:6387221/93‑1 (MQ=255)

                             aCCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCgttgt                                                            <  2:769955/93‑1 (MQ=255)

                                gCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTaa                                                         >  2:4385410/1‑93 (MQ=255)

                                 cTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAAt                                                        <  1:2432922/93‑1 (MQ=255)

                                  tGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAAtt                                                       >  2:4019287/1‑93 (MQ=255)

                                  tGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAAtt                                                       >  2:4130583/1‑93 (MQ=255)

                                  tGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAAtt                                                       >  1:1607312/1‑93 (MQ=255)

                                   ggCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAAttt                                                      <  2:264256/93‑1 (MQ=255)

                                    gCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTg                                                     >  2:6351595/1‑93 (MQ=255)

                                    gCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTg                                                     <  2:1235796/93‑1 (MQ=255)

                                      cTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGt                                                   <  1:1001719/93‑1 (MQ=255)

                                        cACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGttt                                                 >  2:4301333/1‑93 (MQ=255)

                                        cACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTAATCGTTGTTAATTTGGttt                                                 <  1:6290755/93‑1 (MQ=255)

                                         aCGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTc                                                >  1:5759338/1‑93 (MQ=255)

                                          cGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTcc                                               <  1:4683056/93‑1 (MQ=255)

                                           gCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCg                                              >  1:609761/1‑93 (MQ=255)

                                            cTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCgt                                             >  1:2080305/1‑93 (MQ=255)

                                            cTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCgt                                             <  2:2759358/93‑1 (MQ=255)

                                             tttACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCgtg                                            >  2:3910992/1‑93 (MQ=255)

                                              ttACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTTATCGTTGTTAATTTGGTTTCCgtgt                                           >  1:4025807/1‑93 (MQ=255)

                                              ttACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCgtgt                                           <  1:481052/93‑1 (MQ=255)

                                                aCTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCt                                         >  1:263738/1‑93 (MQ=255)

                                                aCTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCt                                         <  1:2566077/93‑1 (MQ=255)

                                                 cTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTg                                        >  2:5613947/1‑93 (MQ=255)

                                                  ttAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGt                                       <  2:4670251/93‑1 (MQ=255)

                                                   tAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGtt                                      <  2:3129925/93‑1 (MQ=255)

                                                     gCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTcc                                    <  1:384862/93‑1 (MQ=255)

                                                      cAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCt                                   <  1:4919441/93‑1 (MQ=255)

                                                      cAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCt                                   <  1:4123115/93‑1 (MQ=255)

                                                        aTGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTgg                                 >  2:3679372/1‑93 (MQ=255)

                                                         tGCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGt                                <  1:3716049/93‑1 (MQ=255)

                                                          gCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGtt                               <  2:5466279/93‑1 (MQ=255)

                                                          gCCTCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGtt                               >  2:5353708/1‑93 (MQ=255)

                                                             tCGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTtgt                            >  1:1073549/1‑93 (MQ=255)

                                                              cGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTtgtg                           >  1:79686/1‑93 (MQ=255)

                                                              cGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTtgtg                           >  2:3790200/1‑93 (MQ=255)

                                                              cGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTtgtg                           <  1:2791122/93‑1 (MQ=255)

                                                              cGGCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTtgtg                           >  1:1275238/1‑93 (MQ=255)

                                                               ggCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTgg                          >  2:2253529/1‑93 (MQ=255)

                                                               ggCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTgg                          >  2:4912464/1‑93 (MQ=255)

                                                                gCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTggg                         >  2:2121074/1‑92 (MQ=255)

                                                                gCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGa                         >  2:592926/1‑93 (MQ=255)

                                                                gCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGa                         <  2:3450480/93‑1 (MQ=255)

                                                                gCTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGa                         >  1:5243206/1‑93 (MQ=255)

                                                                 cTCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGCTAATTTGGTCTCCGTGTCTGTTCCTGGTTTGTGGAt                        >  1:5450861/1‑93 (MQ=255)

                                                                  tCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATg                       >  2:2446572/1‑93 (MQ=255)

                                                                  tCCGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATg                       <  2:3492628/93‑1 (MQ=255)

                                                                    cGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGt                     <  1:3141541/93‑1 (MQ=255)

                                                                    cGCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGt                     <  2:3229637/93‑1 (MQ=255)

                                                                     gCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGtt                    <  1:2031927/93‑1 (MQ=255)

                                                                     gCAAACGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTCCCGTGTCTGTTCCTGGTTTGTGGATGGtt                    <  2:4436769/93‑1 (MQ=255)

                                                                        aaCGACGAATATTTTCAGTCATCTTCTTTTATCCTCCACGTCATCGTTGTTAATTTGGGTTCCGTGTCTGTTCCTGGTTTGTGGATGGTttta                 >  1:6464739/1‑93 (MQ=255)

                                                                        aaCGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTtata                 >  1:4447100/1‑93 (MQ=255)

                                                                        aaCGACGAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGCTTCCGTGTCTGTTCCTGGTTTGTGGATGGTtata                 >  1:3961938/1‑93 (MQ=255)

                                                                         acgacgAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTatat                >  2:901581/1‑93 (MQ=255)

                                                                         acgacgAATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTatat                >  2:4542655/1‑93 (MQ=255)

                                                                          cgacgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtc               <  1:6058854/93‑1 (MQ=255)

                                                                           gacgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtct              <  2:3781608/93‑1 (MQ=255)

                                                                            gcgaATATTTTCAGTCATCTTCTTTTCCCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtctc             <  2:6472874/92‑1 (MQ=255)

                                                                            acgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtctc             <  2:257574/93‑1 (MQ=255)

                                                                            acgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtctc             >  1:4222972/1‑93 (MQ=255)

                                                                            acgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtctc             <  1:5573552/93‑1 (MQ=255)

                                                                            acgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtctc             >  1:3446998/1‑93 (MQ=255)

                                                                            acgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtctc             >  2:2915881/1‑93 (MQ=255)

                                                                            acgaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATAtctc             >  2:1328144/1‑93 (MQ=255)

                                                                              gaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTg           <  1:2911068/93‑1 (MQ=255)

                                                                              gaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTg           >  2:1687212/1‑93 (MQ=255)

                                                                              gaATATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTg           >  2:1005214/1‑93 (MQ=255)

                                                                               aaTATTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTgg          >  1:1774523/1‑93 (MQ=255)

                                                                                atatTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGa         >  2:5314647/1‑93 (MQ=255)

                                                                                  atTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAg       <  2:6160551/93‑1 (MQ=255)

                                                                                  atTTTCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAg       >  2:1753062/1‑93 (MQ=255)

                                                                                   ttttCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAgc      >  1:1683630/1‑93 (MQ=255)

                                                                                      tCAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAGCGCa   >  1:5055771/1‑93 (MQ=255)

                                                                                       cAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAGCGCAg  <  2:6095310/93‑1 (MQ=255)

                                                                                       cAGTCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGCTTGTGGATGGTTATATCTCTGGAAGCGCAg  >  2:6029902/1‑93 (MQ=255)

GTTTTATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGCCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAGCGCAG  >  NC_000913/1323396‑1323575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`