BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,354,431	T→C	D235G (GAT→GGT)	sapA ←	SapA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,354,431	0	T	C	100.0%	950.5 / NA	265	D235G (GAT→GGT)	sapA	SapA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (131/134); total (131/134)

Only 100 of 276 total aligned reads displayed.

CCGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCATCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCC  >  NC_000913/1354341‑1354520

ccGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGtcacca                                                                                         >  2:5315722/1‑93 (MQ=255)

 cGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTcaccat                                                                                        <  2:6223986/93‑1 (MQ=255)

    gcAGGAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGAc                                                                                     <  2:3492269/92‑1 (MQ=255)

      aGGAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGt                                                                                   <  2:660213/93‑1 (MQ=255)

      aGGAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGt                                                                                   <  2:4676886/93‑1 (MQ=255)

       ggAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGtt                                                                                  >  2:5982825/1‑93 (MQ=255)

       ggAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGtt                                                                                  <  1:2558899/93‑1 (MQ=255)

       ggAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGtt                                                                                  <  1:2477434/93‑1 (MQ=255)

        gAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTg                                                                                 >  1:933132/1‑93 (MQ=255)

         aGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGt                                                                                <  1:96758/93‑1 (MQ=255)

          gTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTa                                                                               <  1:5420630/93‑1 (MQ=255)

             tCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGc                                                                            <  1:451758/93‑1 (MQ=255)

             tCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGc                                                                            <  2:1231742/93‑1 (MQ=255)

              cGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCg                                                                           >  2:5418428/1‑93 (MQ=255)

                aCAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGaa                                                                         <  1:91111/93‑1 (MQ=255)

                aCAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGaa                                                                         <  1:5971270/93‑1 (MQ=255)

                 cAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAAt                                                                        >  2:2830166/1‑93 (MQ=255)

                  aGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATa                                                                       <  1:4332380/93‑1 (MQ=255)

                   gACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATaa                                                                      <  1:6304865/93‑1 (MQ=255)

                     cGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAAt                                                                    <  1:3220300/93‑1 (MQ=255)

                     cGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAAt                                                                    <  2:3713272/93‑1 (MQ=255)

                     cGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAAt                                                                    <  1:3479293/93‑1 (MQ=255)

                     cGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAAt                                                                    <  2:2359080/93‑1 (MQ=255)

                      gTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAAtt                                                                   <  2:4009517/93‑1 (MQ=255)

                      gTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAAtt                                                                   <  2:3555293/93‑1 (MQ=255)

                       tCCGGTTCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTg                                                                  <  1:3124069/93‑1 (MQ=255)

                       tCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTg                                                                  <  1:2019556/93‑1 (MQ=255)

                         cGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGcc                                                                <  1:3778854/93‑1 (MQ=255)

                         cGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGcc                                                                <  1:3830817/93‑1 (MQ=255)

                          ggTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGccc                                                               <  1:6017580/93‑1 (MQ=255)

                          ggTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGCTGTAGGCGAATAAATTGccc                                                               >  1:2914933/1‑93 (MQ=255)

                          ggTGCCGCCGGAGCATAAACCCACCACTGCCTGCGTCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGccc                                                               <  2:5821399/93‑1 (MQ=255)

                                   ggAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTa                                                      >  1:785460/1‑93 (MQ=255)

                                   ggAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTa                                                      >  1:1094793/1‑93 (MQ=255)

                                    gAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTAt                                                     >  2:1133806/1‑93 (MQ=255)

                                    gAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTAt                                                     <  2:6405926/93‑1 (MQ=255)

                                    gAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTAt                                                     <  1:1706442/93‑1 (MQ=255)

                                    gAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTAt                                                     >  1:867697/1‑93 (MQ=255)

                                     aGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTAtt                                                    <  1:5660175/93‑1 (MQ=255)

                                     aGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTAtt                                                    <  2:4103134/93‑1 (MQ=255)

                                     aGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTAtt                                                    <  2:875719/93‑1 (MQ=255)

                                      gCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTc                                                   >  1:6419163/1‑93 (MQ=255)

                                      gCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTc                                                   >  2:1066748/1‑93 (MQ=255)

                                      gCCTAAATCCACCACTACCTGCGGCATTAACGGTTTAACGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTc                                                   <  1:612721/93‑1 (MQ=255)

                                       ccTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTcc                                                  <  2:2515182/93‑1 (MQ=255)

                                       ccTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTcc                                                  >  1:3068344/1‑93 (MQ=255)

                                        cTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCg                                                 >  1:5022082/1‑93 (MQ=255)

                                          aaaTCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGAc                                               <  2:2787061/93‑1 (MQ=255)

                                          aaaTCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGAc                                               <  2:2926001/93‑1 (MQ=255)

                                            aTCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACaa                                             <  1:1564126/93‑1 (MQ=255)

                                               caccacTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTg                                          >  1:705399/1‑93 (MQ=255)

                                               caccacTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTg                                          >  1:1611628/1‑93 (MQ=255)

                                               caccacTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTg                                          >  1:3636828/1‑93 (MQ=255)

                                               caccacTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTg                                          >  1:5747533/1‑93 (MQ=255)

                                                  cacTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATa                                       >  1:6232928/1‑93 (MQ=255)

                                                  cacTACCTGCGGCATTAACGGGTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAACAAATTGCCCGGCGCGGTAATCCGACAACTGCTa                                       >  2:1658364/1‑93 (MQ=255)

                                                      aCCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGa                                   >  2:2486095/1‑93 (MQ=255)

                                                       ccTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGAc                                  >  1:2983939/1‑93 (MQ=255)

                                                       ccTGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGAc                                  <  1:4654565/93‑1 (MQ=255)

                                                         tGCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCg                                >  1:2310590/1‑93 (MQ=255)

                                                          gCGGCATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCgg                               >  2:978922/1‑93 (MQ=255)

                                                              cATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGcc                           <  1:5782327/93‑1 (MQ=255)

                                                              cATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGcc                           <  1:2116860/93‑1 (MQ=255)

                                                              cATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGcc                           <  2:3910747/93‑1 (MQ=255)

                                                              cATTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGcc                           <  2:2592595/93‑1 (MQ=255)

                                                               aTTAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCg                          >  2:610330/1‑93 (MQ=255)

                                                                ttAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGa                         <  1:527064/93‑1 (MQ=255)

                                                                 tAACGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGAc                        <  2:1880921/93‑1 (MQ=255)

                                                                   aCGGTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCg                      >  1:2754305/1‑93 (MQ=255)

                                                                     ggTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGt                    <  1:1001919/93‑1 (MQ=255)

                                                                     ggTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGt                    >  1:1941395/1‑93 (MQ=255)

                                                                     ggTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGt                    <  1:3731326/93‑1 (MQ=255)

                                                                      gTTTACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGtt                   >  1:2391992/1‑93 (MQ=255)

                                                                       tttACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTg                  >  2:4308491/1‑93 (MQ=255)

                                                                       tttACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGCACCGGTGCCGACCGGTTg                  >  1:5238315/1‑93 (MQ=255)

                                                                       gttACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTg                  <  2:6277143/92‑1 (MQ=255)

                                                                        ttACCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGa                 <  1:340670/93‑1 (MQ=255)

                                                                          aCCGCGCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACg               >  2:1763770/1‑93 (MQ=255)

                                                                            cgcgCCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGt             <  1:1234688/93‑1 (MQ=255)

                                                                             gcgcCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTc            >  2:2694027/1‑93 (MQ=255)

                                                                              cgcCAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCg           >  1:2255349/1‑93 (MQ=255)

                                                                                ccAGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAg         >  2:1395919/1‑93 (MQ=255)

                                                                                 cAGACGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGt        <  2:572291/93‑1 (MQ=255)

                                                                                  aGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGtt       >  2:6181238/1‑93 (MQ=255)

                                                                                  aGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGtt       <  2:513029/93‑1 (MQ=255)

                                                                                  aGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGtt       <  1:4793925/93‑1 (MQ=255)

                                                                                  aGAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGtt       >  1:4280278/1‑93 (MQ=255)

                                                                                   gAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTg      >  2:417746/1‑93 (MQ=255)

                                                                                   gAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTg      <  1:3184178/93‑1 (MQ=255)

                                                                                   gAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTg      >  2:6360378/1‑93 (MQ=255)

                                                                                   gAAGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGGTg      >  2:4403465/1‑93 (MQ=255)

                                                                                    aaGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGc     >  1:2955661/1‑93 (MQ=255)

                                                                                     aGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTTCt    >  1:408143/1‑93 (MQ=255)

                                                                                     aGTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCt    >  2:2106599/1‑93 (MQ=255)

                                                                                      gTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTc   >  1:4680473/1‑93 (MQ=255)

                                                                                      gTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTc   <  2:3194027/93‑1 (MQ=255)

                                                                                      gTCACCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTc   >  1:4064965/1‑93 (MQ=255)

                                                                                       tcaccaTGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTcc  >  2:1922104/1‑93 (MQ=255)

                                                                                       tcaccaTGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTcc  <  2:3598502/93‑1 (MQ=255)

                                                                                       tcaccaTGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTcc  <  1:6120686/93‑1 (MQ=255)

CCGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCCGGAGCCTAAATCCACCACTACCTGCGGCATTAACGGTTTACCGCGCCAGAAGTCATCATGACGTTGTAGGCGAATAAATTGCCCGGCGCGGTATTCCGACAACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCC  >  NC_000913/1354341‑1354520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`