BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,362,462	T→C	N69N (AAT→AAC)	ordL →	putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,362,462	0	T	C	100.0%	951.7 / NA	274	N69N (AAT→AAC)	ordL	putative oxidoreductase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/153); total (121/153)

Only 100 of 285 total aligned reads displayed.

GCTCTCCTCCGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAATGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGGCAGCAT  >  NC_000913/1362372‑1362551

gCTCTCCTCCGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACgg                                                                                         <  2:3020704/93‑1 (MQ=255)

 ctctCCTCCGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGc                                                                                        <  1:983459/93‑1 (MQ=255)

  tctcCTCCGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCg                                                                                       >  2:548828/1‑93 (MQ=255)

     cctccGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGAc                                                                                    >  1:1161727/1‑93 (MQ=255)

     cctccGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGAc                                                                                    >  2:4125141/1‑93 (MQ=255)

        ccGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGc                                                                                 <  1:1003045/93‑1 (MQ=255)

         cgcgCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCt                                                                                <  2:1891024/93‑1 (MQ=255)

          gcgcTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCtt                                                                               <  2:2409849/93‑1 (MQ=255)

           cgcTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTtg                                                                              >  1:1192493/1‑93 (MQ=255)

            gcTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTtgt                                                                             <  2:1113513/93‑1 (MQ=255)

            gcTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTtgt                                                                             >  1:2970234/1‑93 (MQ=255)

             cTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTtgtg                                                                            >  2:6230116/1‑93 (MQ=255)

                cATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGAGCAAGCGGGCGCAACGGCGGACAGCTTGTGAAc                                                                         >  1:4686278/1‑93 (MQ=255)

                   cTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTcc                                                                      <  1:282918/93‑1 (MQ=255)

                   cTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTcc                                                                      <  2:5658724/93‑1 (MQ=255)

                      gCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTAc                                                                   <  2:5780439/93‑1 (MQ=255)

                       cGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACa                                                                  >  2:3492491/1‑93 (MQ=255)

                       cGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACa                                                                  <  2:5862966/93‑1 (MQ=255)

                        ggAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAg                                                                 >  1:5760433/1‑93 (MQ=255)

                        ggAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAg                                                                 >  1:631699/1‑93 (MQ=255)

                        ggAAGCGGCGTTGGACGTAGTGGTCCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAg                                                                 <  1:5330689/93‑1 (MQ=255)

                         gAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGc                                                                <  1:5676238/93‑1 (MQ=255)

                         gAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGc                                                                >  2:2874957/1‑93 (MQ=255)

                         gAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGc                                                                >  2:6177633/1‑93 (MQ=255)

                          aaGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGcc                                                               <  2:5135586/93‑1 (MQ=255)

                          aaGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGcc                                                               >  1:2384289/1‑93 (MQ=255)

                           aGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCcg                                                              >  1:495121/1‑93 (MQ=255)

                           aGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCcg                                                              >  2:241308/1‑93 (MQ=255)

                           aGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCcg                                                              >  2:4220789/1‑93 (MQ=255)

                           aGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCcg                                                              >  2:4759163/1‑93 (MQ=255)

                            gCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCcgc                                                             <  1:4346153/93‑1 (MQ=255)

                             cGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCcgcg                                                            <  1:2674645/93‑1 (MQ=255)

                              gggCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGa                                                           >  2:3826709/1‑93 (MQ=255)

                                gCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACa                                                         <  2:2997116/93‑1 (MQ=255)

                                gCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACa                                                         >  1:6259147/1‑93 (MQ=255)

                                 cTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACAt                                                        <  1:4644264/93‑1 (MQ=255)

                                 cTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACAt                                                        <  2:2196529/93‑1 (MQ=255)

                                 cTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACAt                                                        <  1:2736207/93‑1 (MQ=255)

                                 cTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACAt                                                        <  2:267549/93‑1 (MQ=255)

                                  tttGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATc                                                       >  1:3858718/1‑93 (MQ=255)

                                  tttGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATc                                                       <  2:4734464/93‑1 (MQ=255)

                                  tttGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATc                                                       >  1:5445091/1‑93 (MQ=255)

                                  tttGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGAGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATc                                                       >  1:516041/1‑93 (MQ=255)

                                   ttGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCg                                                      <  1:2182264/93‑1 (MQ=255)

                                    tGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGa                                                     <  2:5374641/93‑1 (MQ=255)

                                    tGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGa                                                     <  1:2639001/93‑1 (MQ=255)

                                    tGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGa                                                     <  2:6158100/93‑1 (MQ=255)

                                     gACGTAGTGGGTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGCCATCGAc                                                    >  2:3314933/1‑93 (MQ=255)

                                       cGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGt                                                  <  1:4454257/93‑1 (MQ=255)

                                       cGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGt                                                  <  1:348622/93‑1 (MQ=255)

                                       cGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGt                                                  <  1:3245627/93‑1 (MQ=255)

                                        gTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTg                                                 >  1:4130040/1‑93 (MQ=255)

                                        gTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTg                                                 <  2:5959796/93‑1 (MQ=255)

                                          aGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGAt                                               <  1:3360185/93‑1 (MQ=255)

                                           gTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATc                                              >  1:3784012/1‑93 (MQ=255)

                                           gTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATc                                              >  1:3563107/1‑93 (MQ=255)

                                            tGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCg                                             >  1:1417229/1‑93 (MQ=255)

                                             ggTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGATTGTGAACTCCTACAGCCGCGACATCGACGTGATCGa                                            >  1:5224442/1‑93 (MQ=255)

                                                tctcGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGaaaa                                         >  2:1189590/1‑93 (MQ=255)

                                                tctcGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGaaaa                                         >  1:1867937/1‑93 (MQ=255)

                                                  tcGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGaaaaaa                                       >  2:6029002/1‑93 (MQ=255)

                                                    gAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGc                                     >  1:2550802/1‑93 (MQ=255)

                                                     aaGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCt                                    <  1:2312970/93‑1 (MQ=255)

                                                      aGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTa                                   <  2:5018104/93‑1 (MQ=255)

                                                      aGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTa                                   >  1:4597906/1‑93 (MQ=255)

                                                       gCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTAc                                  >  2:2359753/1‑93 (MQ=255)

                                                       gCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTAc                                  <  2:5435555/93‑1 (MQ=255)

                                                       gCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTAc                                  <  2:4020632/93‑1 (MQ=255)

                                                       gCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTAc                                  <  1:2277098/93‑1 (MQ=255)

                                                       gCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTAc                                  <  2:1773982/93‑1 (MQ=255)

                                                       gCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTAc                                  <  2:156971/93‑1 (MQ=255)

                                                        ccTCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACg                                 <  2:2530113/93‑1 (MQ=255)

                                                        acTCACGCAGCGGCTTTGGCGAAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATACAAACAAGCTACg                                 >  1:5936091/2‑93 (MQ=255)

                                                          tCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGc                               <  1:787557/93‑1 (MQ=255)

                                                          tCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGc                               <  2:3873347/93‑1 (MQ=255)

                                                          tCACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGc                               <  2:1227813/93‑1 (MQ=255)

                                                           cACGCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCa                              <  2:4626092/93‑1 (MQ=255)

                                                              gCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATgg                           >  1:651/1‑93 (MQ=255)

                                                              gCATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATgg                           >  2:5575617/1‑93 (MQ=255)

                                                              gCATCGGCTTTGGCGCAAGCGGGCGCAACCGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATgg                           >  1:131848/1‑93 (MQ=255)

                                                               cATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGa                          <  2:4467188/93‑1 (MQ=255)

                                                               cATCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGa                          <  1:3110433/93‑1 (MQ=255)

                                                                aTCGGCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGac                         <  2:2726254/93‑1 (MQ=255)

                                                                  cGGTTTGGGCGCAGGGGGGCGCAGCGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGacac                       <  1:6115230/93‑1 (MQ=255)

                                                                    gCTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCg                     <  2:1384882/93‑1 (MQ=255)

                                                                     cTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGc                    <  2:894923/93‑1 (MQ=255)

                                                                     cTTTGGCGCAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGc                    >  1:3034685/1‑93 (MQ=255)

                                                                          gcgcAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTa               <  2:5268591/93‑1 (MQ=255)

                                                                          gcgcAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTa               <  1:47462/93‑1 (MQ=255)

                                                                            gcAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATg             <  1:1683836/93‑1 (MQ=255)

                                                                             cAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGc            >  1:196464/1‑93 (MQ=255)

                                                                             cAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGc            <  2:6102423/93‑1 (MQ=255)

                                                                             cAAGCGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGc            <  1:3277248/93‑1 (MQ=255)

                                                                                 cGGGCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCgg        <  1:3637172/93‑1 (MQ=255)

                                                                                  gggCGCAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGgc       <  1:6219891/93‑1 (MQ=255)

                                                                                    gcgcAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGgcag     <  2:397980/93‑1 (MQ=255)

                                                                                    gcgcAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGgcag     <  2:1625576/93‑1 (MQ=255)

                                                                                     cgcAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGgcagc    >  2:4778031/1‑93 (MQ=255)

                                                                                     cgcAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGgcaga    >  2:3765680/1‑92 (MQ=255)

                                                                                       cAACGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGGCAGCat  <  2:813283/93‑1 (MQ=255)

GCTCTCCTCCGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAATGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGGCAGCAT  >  NC_000913/1362372‑1362551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`