| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,372,245 | A→G | S44S (TCA→TCG) | ycjP → | putative transport system permease protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,372,245 | 0 | A | G | 99.7% | 1060.8 / ‑4.9 | 302 | S44S (TCA→TCG) | ycjP | putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (156/145); minor base T (0/1); total (156/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.91e-01 | |||||||||||
Only 100 of 310 total aligned reads displayed.
CTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCACTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGACTACTT > NC_000913/1372155‑1372334 | cTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCt > 1:2377479/1‑93 (MQ=255)cTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCt < 2:1300451/93‑1 (MQ=255) gggCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCAt > 1:2456061/1‑93 (MQ=255) gCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATcc < 2:3521439/93‑1 (MQ=255) gCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATcc > 2:5534022/1‑93 (MQ=255) cTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCt < 2:3992415/93‑1 (MQ=255) ggCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTAc > 1:5468386/1‑93 (MQ=255) ggCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTAc > 2:4722799/1‑93 (MQ=255) gcgcTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACg > 1:5686370/1‑93 (MQ=255) cgcTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACgc < 1:2578883/93‑1 (MQ=255) cgcTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCACGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACgc < 2:3433610/93‑1 (MQ=255) tGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGTGAAAGAGGCGATCTCGCTGCATCCTACgctgc < 1:5950661/93‑1 (MQ=255) tGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACgctgc < 2:563449/93‑1 (MQ=255) tGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACgctgc > 2:507875/1‑93 (MQ=255) tGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACgctgc < 2:2970025/93‑1 (MQ=255) tGTTTCTCATCACCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACgctgc > 1:1177805/1‑93 (MQ=255) gTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACgctgct < 1:221585/93‑1 (MQ=255) tcatcatcaCGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCgc > 1:4956461/1‑93 (MQ=255) tcagcatcaCGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGACGATCTCGCTCCATCCTACGCTGCTGCCgc < 1:3500270/93‑1 (MQ=255) tcatcaCGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCgcagc < 2:4494784/93‑1 (MQ=255) caCGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTg < 2:201175/93‑1 (MQ=255) caCGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTg < 1:3918601/93‑1 (MQ=255) cGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGa < 2:1662467/93‑1 (MQ=255) gCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGAc < 2:403760/93‑1 (MQ=255) gCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGAc < 1:6270251/93‑1 (MQ=255) tGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGc < 1:804697/93‑1 (MQ=255) tGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGc > 2:4879284/1‑93 (MQ=255) tGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGc < 2:6154757/93‑1 (MQ=255) gTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCt > 2:1872349/1‑93 (MQ=255) tttCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTg > 1:2980281/1‑93 (MQ=255) ttCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTgg > 1:4745525/1‑93 (MQ=255) ttCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTgg > 2:3311351/1‑93 (MQ=255) tCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTggg > 2:1193002/1‑92 (MQ=255) tCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGa > 2:4289518/1‑93 (MQ=255) cATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGc < 2:6371507/93‑1 (MQ=255) aTTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCa < 2:2687704/93‑1 (MQ=255) aTTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCa > 2:2494001/1‑93 (MQ=255) ttGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACg > 2:1424739/1‑93 (MQ=255) ttGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACg > 1:6450361/1‑93 (MQ=255) tgtgATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGt < 2:2229159/93‑1 (MQ=255) gtgATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTc > 2:2906489/1‑93 (MQ=255) gtgATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTc < 2:4775357/93‑1 (MQ=255) gtgATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTc < 1:1576017/93‑1 (MQ=255) gATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGa > 2:3782424/1‑93 (MQ=255) aTGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGAc < 1:3083876/93‑1 (MQ=255) tGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACa < 1:1386989/93‑1 (MQ=255) gCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACAt > 1:912773/1‑93 (MQ=255) tgatgaCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACAttt < 1:6009581/93‑1 (MQ=255) tgatgaCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACAttt < 2:5351414/93‑1 (MQ=255) tgatgaCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACAttt > 2:1591587/1‑93 (MQ=255) tgatgaCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACAttt > 1:3880099/1‑93 (MQ=255) gatgaCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACAtttt < 1:181104/93‑1 (MQ=255) gaCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTaa > 1:274061/1‑93 (MQ=255) aCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAAc > 1:2959012/1‑93 (MQ=255) aCCTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAAc > 1:6122393/1‑93 (MQ=255) ccTCGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAAcc < 2:3637528/93‑1 (MQ=255) cGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCga < 1:4257637/93‑1 (MQ=255) cGTTCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCga < 2:2317527/93‑1 (MQ=255) tCAAGGGCGCGAAGGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCgatga < 2:2418221/93‑1 (MQ=255) tCAAGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCgatga < 1:742590/93‑1 (MQ=255) aaGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGAtt > 1:1114456/1‑93 (MQ=255) aaGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGAtt > 2:786423/1‑93 (MQ=255) aaGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGAtt > 1:1034615/1‑93 (MQ=255) aaGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGAtt > 2:2096459/1‑93 (MQ=255) aGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGAttt > 1:2674988/1‑93 (MQ=255) aGGGCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGAttt > 2:5454166/1‑93 (MQ=255) gggCGCGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGAtttt > 1:636080/1‑93 (MQ=255) gcgcGAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTcc < 1:1967758/93‑1 (MQ=255) gcgAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCg > 1:3570730/1‑93 (MQ=255) gcgAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCg < 1:5194231/93‑1 (MQ=255) cgAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGt < 1:670230/93‑1 (MQ=255) gAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGtt < 1:1888296/93‑1 (MQ=255) gAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGtt < 1:12641/93‑1 (MQ=255) gAAAGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGtt > 1:4629199/1‑93 (MQ=255) caaaGAGGCGCTCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGtt < 1:3382004/92‑1 (MQ=255) aaaGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGttt < 2:5860053/93‑1 (MQ=255) aaaGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGttt < 1:4094304/93‑1 (MQ=255) aaaGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGttt > 2:1190689/1‑93 (MQ=255) aaGAGGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTg < 2:3851069/93‑1 (MQ=255) gagGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTc > 1:1145527/1‑93 (MQ=255) gagGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTc > 2:4328340/1‑93 (MQ=255) gagGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTc < 2:14890/93‑1 (MQ=255) gagGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTc < 1:997417/93‑1 (MQ=255) gagGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTc < 1:4493985/93‑1 (MQ=255) gagGCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTc < 1:3748090/93‑1 (MQ=255) ggCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGa > 1:581723/1‑93 (MQ=255) ggCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGa > 2:305700/1‑93 (MQ=255) ggCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGa > 2:4981199/1‑93 (MQ=255) gCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGac > 1:5321496/1‑93 (MQ=255) gCGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGac < 2:4556605/93‑1 (MQ=255) cGATCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGact < 2:31802/93‑1 (MQ=255) aTCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGactac < 1:211751/93‑1 (MQ=255) aTCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGactac > 1:2541980/1‑93 (MQ=255) aTCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGactac > 2:6177223/1‑93 (MQ=255) aTCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGactac > 2:1102939/1‑93 (MQ=255) aTCTCGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGactac > 2:688455/1‑93 (MQ=255) tctcGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGactact > 1:1507416/1‑93 (MQ=255) tctcGCTCCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTACCCCGATGATTTTCCCGTTTGTCGactact < 2:4002175/93‑1 (MQ=255) ctcGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGACTACtt > 2:5127689/1‑93 (MQ=255) ctcGCTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGACTACtt < 1:1660535/93‑1 (MQ=255) | CTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCACTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGACTACTT > NC_000913/1372155‑1372334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |