BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,396,204	T→C	Q148R (CAG→CGG)	ydaA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,396,204	0	T	C	100.0%	925.9 / NA	267	Q148R (CAG→CGG)	ydaA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (137/130); total (137/130)

Only 100 of 286 total aligned reads displayed.

TTGACCAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGTCATGT  >  NC_000913/1396114‑1396293

 tGACCAGTTTTTCATTGAGCGCATTATGATACGGCTCTTTACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCCGCCACGGCCggg                                                                                        >  1:2393819/1‑92 (MQ=255)

  gACCAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTGCGGCCACGCCCGGTc                                                                                       <  1:6135685/93‑1 (MQ=255)

  gACCAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTc                                                                                       >  2:87687/1‑93 (MQ=255)

   aCCAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCACCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCt                                                                                      <  1:4910862/93‑1 (MQ=255)

    ccAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCtt                                                                                     >  2:6276349/1‑93 (MQ=255)

    ccAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCtt                                                                                     <  1:3601636/93‑1 (MQ=255)

     cAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCttt                                                                                    <  2:5068757/93‑1 (MQ=255)

     cAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCctt                                                                                    >  1:5553941/1‑93 (MQ=255)

       gTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCa                                                                                  >  1:4396646/1‑93 (MQ=255)

         ttttCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTGAcc                                                                                >  1:735404/1‑93 (MQ=255)

         ttttCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCAcc                                                                                <  2:3426617/93‑1 (MQ=255)

         ttttCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCAcc                                                                                <  1:3972451/93‑1 (MQ=255)

            tCATTGAGCGCATTATGATTCGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATc                                                                             >  1:6266273/1‑93 (MQ=255)

            tCATTGAGCGCATTATGATCCGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCTCCATc                                                                             <  2:4669192/93‑1 (MQ=255)

            tCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATc                                                                             >  1:2511387/1‑93 (MQ=255)

            tCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATc                                                                             >  1:2628721/1‑93 (MQ=255)

             cATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATcc                                                                            >  1:4234009/1‑93 (MQ=255)

              aTTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCca                                                                           >  1:6040115/1‑93 (MQ=255)

              aTTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCca                                                                           >  1:6373996/1‑93 (MQ=255)

                tGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCATCATCcaca                                                                         >  1:3777674/1‑93 (MQ=255)

                 gAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCacac                                                                        <  1:4703041/93‑1 (MQ=255)

                 gAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCacac                                                                        >  1:1323630/1‑93 (MQ=255)

                 gAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCacac                                                                        <  1:3167389/93‑1 (MQ=255)

                   gcgcATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCg                                                                      >  1:2312740/1‑93 (MQ=255)

                    cgcATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCgg                                                                     <  1:3465428/93‑1 (MQ=255)

                      cATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGc                                                                   >  2:4384950/1‑93 (MQ=255)

                       aTTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCt                                                                  <  1:2835486/93‑1 (MQ=255)

                       aTTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGCGCt                                                                  >  2:1020803/1‑93 (MQ=255)

                       aTTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGGCTTTCACCATCCACACCCGGCt                                                                  >  1:1730059/1‑93 (MQ=255)

                        ttATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCtt                                                                 <  1:1924284/93‑1 (MQ=255)

                        ttATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCtt                                                                 <  2:6218283/93‑1 (MQ=255)

                        ttATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCtt                                                                 <  2:5999980/93‑1 (MQ=255)

                          aTGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTgg                                                               <  2:1400824/93‑1 (MQ=255)

                           tGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTggg                                                              >  2:2581523/1‑93 (MQ=255)

                             aTACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCa                                                            <  2:3780789/93‑1 (MQ=255)

                             aTACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCa                                                            >  2:4191476/1‑93 (MQ=255)

                              tagggCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCAt                                                           <  2:3909287/90‑1 (MQ=255)

                               aCGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCAtt                                                          <  2:4463200/93‑1 (MQ=255)

                               aCGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGGCTTTCACCATCCACACCGGGCTTTGGCAtt                                                          >  2:3145458/1‑93 (MQ=255)

                                cGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCAttt                                                         >  2:5140327/1‑93 (MQ=255)

                                 ggCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTg                                                        <  2:3209084/93‑1 (MQ=255)

                                  gCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGc                                                       >  2:4847514/1‑93 (MQ=255)

                                    tctTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGt                                                     >  2:5382414/1‑93 (MQ=255)

                                    tctTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGt                                                     <  1:1445617/93‑1 (MQ=255)

                                    tctTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCAAGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGt                                                     <  1:2122009/93‑1 (MQ=255)

                                     ctTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTa                                                    >  2:497796/1‑93 (MQ=255)

                                     ctTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTa                                                    >  2:5455324/1‑93 (MQ=255)

                                      ttCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTaa                                                   >  2:4283204/1‑93 (MQ=255)

                                      ttCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCCGCCACGGCCGGTCTTTCACCATCCACACCGGGGGTGGACATTTGCGTaa                                                   >  1:5597357/1‑93 (MQ=255)

                                       tCACGGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAAc                                                  <  1:5195154/93‑1 (MQ=255)

                                         aCTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAg                                                >  2:3616265/1‑93 (MQ=255)

                                         aCTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAg                                                >  1:1600315/1‑93 (MQ=255)

                                         aCTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAg                                                <  2:1303651/93‑1 (MQ=255)

                                          cTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGa                                               >  1:5650653/1‑93 (MQ=255)

                                            ggCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATg                                             >  1:5486572/1‑93 (MQ=255)

                                            ggCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATg                                             >  1:3545831/1‑93 (MQ=255)

                                              cGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGcc                                           <  2:3074320/93‑1 (MQ=255)

                                              cGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGcc                                           <  1:1233468/93‑1 (MQ=255)

                                               gagaTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCa                                          <  2:350758/93‑1 (MQ=255)

                                                agaTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAg                                         <  2:16984/93‑1 (MQ=255)

                                                agaTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAg                                         <  1:5350387/93‑1 (MQ=255)

                                                agaTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAg                                         >  2:1953827/1‑93 (MQ=255)

                                                agaTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAg                                         >  1:4171231/1‑93 (MQ=255)

                                                agaTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGAGCTTGGGCATTTGCGTAACAGATGCCAg                                         >  2:2459793/1‑93 (MQ=255)

                                                 gaTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGt                                        >  2:2326747/1‑93 (MQ=255)

                                                  aTTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCTGGCTTGGGCATTTGCGTAACAGATGCCAGTc                                       >  2:90789/1‑93 (MQ=255)

                                                   ttCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTcc                                      <  1:1857290/93‑1 (MQ=255)

                                                   ttCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTcc                                      <  1:5268417/93‑1 (MQ=255)

                                                     cACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGt                                    >  2:680018/1‑93 (MQ=255)

                                                      aCCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGtt                                   >  2:2781290/1‑93 (MQ=255)

                                                       ccGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTg                                  >  1:4802163/1‑93 (MQ=255)

                                                       ccGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTg                                  >  1:4996530/1‑93 (MQ=255)

                                                         gCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGc                                >  2:1646582/1‑93 (MQ=255)

                                                               aGCGCCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTaaaa                          >  2:4092853/1‑93 (MQ=255)

                                                                gcgcCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTaaaaa                         >  2:738268/1‑93 (MQ=255)

                                                                gcgcCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTaaaaa                         >  2:3957041/1‑93 (MQ=255)

                                                                gcgcCTTGCCTCCTTCCGGCCACGCCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTaaaaa                         <  2:6136206/93‑1 (MQ=255)

                                                                 cgcCTTGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAAt                        <  2:4313073/93‑1 (MQ=255)

                                                                    cTTGCCTCCTTCCGGCCACGGCCGGTCTTTCTCCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCAc                     <  1:3723858/93‑1 (MQ=255)

                                                                     ttGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCAcc                    <  1:4491036/93‑1 (MQ=255)

                                                                      tGCCTCCTTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCAccc                   >  2:1876709/1‑92 (MQ=255)

                                                                        cctcctTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCt                 <  2:3289086/93‑1 (MQ=255)

                                                                        cctcctTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCt                 <  1:4606675/93‑1 (MQ=255)

                                                                          tcctTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATGACCGCTTc               >  2:1238567/1‑93 (MQ=255)

                                                                          tcctTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTc               >  1:803797/1‑93 (MQ=255)

                                                                          tcctTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTc               <  1:437061/93‑1 (MQ=255)

                                                                           cctTCCGGCCACGTCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTcc              <  1:3227092/93‑1 (MQ=255)

                                                                           cctTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTcc              <  1:4331465/93‑1 (MQ=255)

                                                                            ctTCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCa             <  1:3909689/93‑1 (MQ=255)

                                                                              tCCGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGa           >  2:5745329/1‑93 (MQ=255)

                                                                               ccGGCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGAc          <  1:3412587/93‑1 (MQ=255)

                                                                                 ggCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACgg        >  2:5847665/1‑93 (MQ=255)

                                                                                 ggCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACgg        <  1:1663591/93‑1 (MQ=255)

                                                                                  gCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGt       >  1:894248/1‑93 (MQ=255)

                                                                                  gCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGt       >  1:4084864/1‑93 (MQ=255)

                                                                                  gCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGt       <  2:3705131/93‑1 (MQ=255)

                                                                                  gCCACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGt       <  1:5140329/93‑1 (MQ=255)

                                                                                   ccACGGCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGTc      <  1:3105596/93‑1 (MQ=255)

                                                                                       ggCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGTCATGt  <  2:5195905/93‑1 (MQ=255)

                                                                                       ggCCGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGTCATGt  >  1:576387/1‑93 (MQ=255)

TTGACCAGTTTTTCATTGAGCGCATTATGATACGGCTCTTCACTGGCGAGATTCACCGCCACCAGCGCCTTGCCTCCTTCCGGCCACGGCTGGTCTTTCACCATCCACACCGGGCTTGGGCATTTGCGTAACAGATGCCAGTCCGTTGGCGTAAAAATCACCGCTTCCAGACGGTCATGT  >  NC_000913/1396114‑1396293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`