BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,497,509	A→G	L322P (CTG→CCG)	b1428 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,497,509	0	A	G	99.6%	828.3 / ‑4.4	239	L322P (CTG→CCG)	b1428	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (136/102); total (136/103)
Fisher's exact test for biased strand distribution p-value = 4.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.45e-01

Only 100 of 248 total aligned reads displayed.

AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCG  >  NC_000913/1497419‑1497598

aaGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGgc                                                                                         >  1:3609097/1‑93 (MQ=255)

 aGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGgcg                                                                                        <  1:4255401/93‑1 (MQ=255)

  ggTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCcggcgg                                                                                       >  1:3487861/1‑93 (MQ=255)

   gTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCggcggc                                                                                      >  2:454993/1‑93 (MQ=255)

     tGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGt                                                                                    <  1:5707440/93‑1 (MQ=255)

      gCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGtt                                                                                   >  2:1401738/1‑93 (MQ=255)

         tGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTcgc                                                                                <  1:4318762/93‑1 (MQ=255)

           aaaCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGt                                                                              >  2:3401701/1‑93 (MQ=255)

           aaaCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGt                                                                              <  1:2489269/93‑1 (MQ=255)

            aaCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTa                                                                             >  2:2762314/1‑93 (MQ=255)

             aCAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTaa                                                                            >  1:3843110/1‑93 (MQ=255)

               aGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATg                                                                          <  1:3688404/93‑1 (MQ=255)

               aGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATg                                                                          >  2:847837/1‑93 (MQ=255)

                ggCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATgc                                                                         <  2:4049807/93‑1 (MQ=255)

                ggCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATgc                                                                         >  2:1794128/1‑93 (MQ=255)

                 gCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATgcg                                                                        >  2:5807521/1‑93 (MQ=255)

                   tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct                                                                      >  1:5953509/1‑93 (MQ=255)

                   tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct                                                                      >  2:2605987/1‑93 (MQ=255)

                   tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct                                                                      >  1:4836015/1‑93 (MQ=255)

                   tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGct                                                                      >  1:4494723/1‑93 (MQ=255)

                   tGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGACGTTCGCGTAATGCGct                                                                      >  1:5983695/1‑93 (MQ=255)

                    gAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctc                                                                     >  2:6395832/1‑93 (MQ=255)

                     aGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcc                                                                    <  1:2200177/93‑1 (MQ=255)

                      gTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGGTCGCGTAATGCGctcct                                                                   >  2:4430887/1‑93 (MQ=255)

                       ttCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctc                                                                  >  2:2999232/1‑93 (MQ=255)

                       ttCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctc                                                                  <  1:2055657/93‑1 (MQ=255)

                       ttCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctc                                                                  >  2:7261/1‑93 (MQ=255)

                        tCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGctcctct                                                                 >  2:3766896/1‑92 (MQ=255)

                        tCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCg                                                                 >  1:3935532/1‑93 (MQ=255)

                          cTGAATGATGCATATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGcc                                                               <  1:5411747/93‑1 (MQ=255)

                            gAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGt                                                             <  1:2893570/93‑1 (MQ=255)

                            gAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGt                                                             <  1:2773395/93‑1 (MQ=255)

                            gAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGt                                                             >  2:1615904/1‑93 (MQ=255)

                             aaTGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGtt                                                            <  1:4237932/93‑1 (MQ=255)

                             aaTGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGtt                                                            >  2:2083999/1‑93 (MQ=255)

                             aaTGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGtt                                                            >  2:4749952/1‑93 (MQ=255)

                              atgatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTa                                                           >  2:4959880/1‑93 (MQ=255)

                              atgatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTa                                                           >  1:3508054/1‑93 (MQ=255)

                               tgatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTaa                                                          >  1:872458/1‑93 (MQ=255)

                                gatgCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAAt                                                         >  2:3228184/1‑93 (MQ=255)

                                   gCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGAc                                                      >  1:4847799/1‑93 (MQ=255)

                                     cTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACtt                                                    >  1:3409936/1‑93 (MQ=255)

                                      tATGATGAGGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACttt                                                   <  1:5020066/93‑1 (MQ=255)

                                        tgatgatgTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTg                                                 >  2:1989151/1‑93 (MQ=255)

                                             atgTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCa                                            <  2:885060/93‑1 (MQ=255)

                                             atgTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCa                                            >  1:5571260/1‑93 (MQ=255)

                                              tgtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAGTGCGCTACTCGCCGTTGATGACTTTTGGACCAc                                           >  2:5662780/1‑93 (MQ=255)

                                              tgtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAc                                           >  2:583097/1‑93 (MQ=255)

                                              tgtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCCGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAc                                           >  1:4551201/1‑93 (MQ=255)

                                               gtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACg                                          <  2:227133/93‑1 (MQ=255)

                                               gtgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACg                                          >  1:5204117/1‑93 (MQ=255)

                                                tgAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACgg                                         <  2:4256315/93‑1 (MQ=255)

                                                 gAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGa                                        >  2:5163228/1‑93 (MQ=255)

                                                  aaCTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCAAGGAc                                       >  1:5346293/1‑93 (MQ=255)

                                                   aCTTATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACa                                      >  1:4938626/1‑93 (MQ=255)

                                                    cTTATACGCGCGTATTATCGATGCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACAt                                     <  2:3394406/93‑1 (MQ=255)

                                                     ttATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATg                                    >  1:5143768/1‑93 (MQ=255)

                                                     ttATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATg                                    >  1:1927577/1‑93 (MQ=255)

                                                     ttATACGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATg                                    <  1:4214529/93‑1 (MQ=255)

                                                      tataCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGa                                   <  1:3563996/93‑1 (MQ=255)

                                                      tataCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTCGACCACGGACATGa                                   >  2:5729692/1‑93 (MQ=255)

                                                        taCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAc                                 >  2:2415829/1‑93 (MQ=255)

                                                        taCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAc                                 >  1:1131371/1‑93 (MQ=255)

                                                        taCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAc                                 <  1:5629501/93‑1 (MQ=255)

                                                         aCGCGCGTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAAcc                                <  1:835281/93‑1 (MQ=255)

                                                            cgcgTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCgtg                             >  2:1081698/1‑93 (MQ=255)

                                                             gcgTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCgtgt                            >  1:1270724/1‑93 (MQ=255)

                                                              cgTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTc                           <  2:6338473/93‑1 (MQ=255)

                                                               gTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCg                          >  2:1321796/1‑93 (MQ=255)

                                                               gTATTATCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCg                          >  2:5366109/1‑93 (MQ=255)

                                                                 tgtatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGcc                        <  2:292298/91‑1 (MQ=255)

                                                                 attatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGcc                        >  2:3514393/1‑93 (MQ=255)

                                                                  ttatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCa                       >  2:3238464/1‑93 (MQ=255)

                                                                  ttatCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCa                       >  1:294099/1‑93 (MQ=255)

                                                                   tatCGATTCACAATACCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCAt                      <  1:1848757/93‑1 (MQ=255)

                                                                    atCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATc                     >  2:4359554/1‑93 (MQ=255)

                                                                     tCGATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCa                    >  1:1220862/1‑93 (MQ=255)

                                                                       gATTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCaaa                  >  1:3289876/1‑93 (MQ=255)

                                                                        aTTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAg                 <  2:4508308/93‑1 (MQ=255)

                                                                        aTTCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAg                 >  2:3530588/1‑93 (MQ=255)

                                                                         ttCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAgg                >  2:6263274/1‑93 (MQ=255)

                                                                         ttCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAgg                <  2:5541002/93‑1 (MQ=255)

                                                                          tCACAATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGc               <  1:558761/93‑1 (MQ=255)

                                                                           cacaATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCt              <  2:5581499/93‑1 (MQ=255)

                                                                            acaATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCtt             >  1:4116951/1‑93 (MQ=255)

                                                                             caATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTc            >  1:3890919/1‑93 (MQ=255)

                                                                             caATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTc            <  1:2712681/93‑1 (MQ=255)

                                                                             caATAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTc            <  1:2622190/93‑1 (MQ=255)

                                                                              aaTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCa           <  1:3071814/93‑1 (MQ=255)

                                                                               aTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCaa          <  2:6581/93‑1 (MQ=255)

                                                                               aTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCaa          >  2:591844/1‑93 (MQ=255)

                                                                               aTAACCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCaa          <  1:700471/93‑1 (MQ=255)

                                                                                 aaCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacg        >  1:1499983/1‑93 (MQ=255)

                                                                                  aCCCTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAAGCTTCAacga       >  1:979209/1‑93 (MQ=255)

                                                                                   cccTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacgac      <  1:1606257/93‑1 (MQ=255)

                                                                                   ccatGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacgac      <  1:3034382/90‑1 (MQ=255)

                                                                                    ccTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAacgacg     >  2:1245085/1‑93 (MQ=255)

                                                                                     cTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACgg    >  1:2223923/1‑93 (MQ=255)

                                                                                     cTGCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACgg    <  1:633505/93‑1 (MQ=255)

                                                                                       gCCGGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCg  >  1:1000781/1‑93 (MQ=255)

AAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAACCCTGCCAGCGGCGTTCGCGTAATGCGCTCCTCGCCGTTAATGACTTTTGGACCACGGACATGAACCGTGTCGCCATCAAAGGCTTCAACGACGGCG  >  NC_000913/1497419‑1497598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`