BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,503,894	T→C	T71A (ACC→GCC)	b1433 ←	putative membrane transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,503,894	0	T	C	100.0%	834.3 / NA	240	T71A (ACC→GCC)	b1433	putative membrane transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (124/116); total (124/116)

Only 100 of 243 total aligned reads displayed.

TGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGTGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTG  >  NC_000913/1503804‑1503983

tGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCga                                                                                         <  2:53822/93‑1 (MQ=255)

 ggTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCgag                                                                                        >  1:2310652/1‑93 (MQ=255)

  gTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCgaga                                                                                       <  2:8386/93‑1 (MQ=255)

    gACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAAc                                                                                     <  2:4948635/93‑1 (MQ=255)

     aCAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACa                                                                                    <  2:5569711/93‑1 (MQ=255)

     aCAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACa                                                                                    <  2:5059550/93‑1 (MQ=255)

     aCAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACa                                                                                    <  1:5297819/93‑1 (MQ=255)

      cAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAg                                                                                   <  1:1421811/93‑1 (MQ=255)

      cAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAg                                                                                   >  1:4345197/1‑93 (MQ=255)

        aTAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGt                                                                                 <  1:3304315/93‑1 (MQ=255)

        aTAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGt                                                                                 >  2:4558592/1‑93 (MQ=255)

        aTAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGt                                                                                 <  1:2554021/93‑1 (MQ=255)

          aaaaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAc                                                                               <  1:3232702/93‑1 (MQ=255)

          aaaaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAc                                                                               <  2:1228819/93‑1 (MQ=255)

          aaaaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAc                                                                               >  2:1164631/1‑93 (MQ=255)

            aaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAcgc                                                                             <  1:6112616/93‑1 (MQ=255)

            aaaCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTAcgc                                                                             >  2:423933/1‑93 (MQ=255)

              aCGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGa                                                                           >  2:3939730/1‑93 (MQ=255)

               cGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGAt                                                                          >  2:5173043/1‑93 (MQ=255)

               cGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGAt                                                                          >  1:1775375/1‑93 (MQ=255)

                 ccGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACATAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATAc                                                                        <  1:5191054/93‑1 (MQ=255)

                 ccGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATAc                                                                        <  2:1505188/93‑1 (MQ=255)

                   gATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCa                                                                      >  1:4227109/1‑93 (MQ=255)

                     tGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATa                                                                    <  2:6416683/93‑1 (MQ=255)

                     tGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATa                                                                    <  2:247733/93‑1 (MQ=255)

                      ggCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATaa                                                                   >  2:4786312/1‑93 (MQ=255)

                        cTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATg                                                                 <  2:3546210/93‑1 (MQ=255)

                        cTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATg                                                                 <  2:2227755/93‑1 (MQ=255)

                         ttCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGt                                                                >  1:1147194/1‑93 (MQ=255)

                          tCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTc                                                               <  1:3698378/93‑1 (MQ=255)

                          tCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTc                                                               >  1:2781925/1‑93 (MQ=255)

                           cGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCa                                                              <  1:197947/93‑1 (MQ=255)

                            gTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCag                                                             >  1:394105/1‑93 (MQ=255)

                            gTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCag                                                             >  2:5176723/1‑93 (MQ=255)

                            gTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCag                                                             >  1:3285066/1‑93 (MQ=255)

                             ttAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCaga                                                            <  1:5668458/93‑1 (MQ=255)

                             ttAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCaga                                                            >  2:2558969/1‑93 (MQ=255)

                              tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag                                                           <  2:4460053/93‑1 (MQ=255)

                              tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag                                                           <  2:3291032/93‑1 (MQ=255)

                              tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag                                                           <  1:4454779/93‑1 (MQ=255)

                              tAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCagag                                                           >  1:1585988/1‑93 (MQ=255)

                               aaGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGt                                                          >  2:3259570/1‑93 (MQ=255)

                               aaGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGt                                                          >  2:578557/1‑93 (MQ=255)

                               aaGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGt                                                          >  1:1822267/1‑93 (MQ=255)

                                aGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc                                                         >  1:1903711/1‑93 (MQ=255)

                                aGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc                                                         <  1:2537587/93‑1 (MQ=255)

                                aGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc                                                         >  1:3527302/1‑93 (MQ=255)

                                aGTCTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTc                                                         <  1:930594/93‑1 (MQ=255)

                                 gtgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCa                                                        <  2:234807/93‑1 (MQ=255)

                                 gtgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCa                                                        >  2:6103916/1‑93 (MQ=255)

                                 gtgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCa                                                        <  2:5689738/93‑1 (MQ=255)

                                  tgtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAg                                                       >  1:4115262/1‑93 (MQ=255)

                                   gtTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCTATACCATAATGTCAGAGTCAGc                                                      <  1:736146/93‑1 (MQ=255)

                                    ttAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATCCCATAATGTCAGAGTCAGCg                                                     <  1:3157692/93‑1 (MQ=255)

                                      aGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACTATGCGGCGCGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTa                                                   >  1:3623269/1‑93 (MQ=255)

                                      aGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTa                                                   >  1:5761660/1‑93 (MQ=255)

                                      aGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTa                                                   <  2:4710516/93‑1 (MQ=255)

                                       gTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTAc                                                  >  1:2932643/1‑93 (MQ=255)

                                         cccTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTAccg                                                <  1:6177733/93‑3 (MQ=255)

                                         cccTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGATGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTg                                                >  2:3554001/1‑93 (MQ=255)

                                           cTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGAc                                              <  2:3076319/93‑1 (MQ=255)

                                               aaTCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGccc                                          <  2:712998/93‑1 (MQ=255)

                                                  ccGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCAtt                                       <  1:6462462/93‑1 (MQ=255)

                                                  ccGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCAtt                                       >  2:1772222/1‑93 (MQ=255)

                                                  ccGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCAtt                                       >  1:5652163/1‑93 (MQ=255)

                                                   cGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTg                                      >  2:1398396/1‑93 (MQ=255)

                                                   cGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGGACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTg                                      >  1:5427217/1‑93 (MQ=255)

                                                       gACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGACAGCGTACTGACGCCCATTGCCAg                                  >  1:78113/1‑93 (MQ=255)

                                                        aCCAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGc                                 <  1:2278063/93‑1 (MQ=255)

                                                         ccAACAAAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGcc                                >  1:318657/1‑93 (MQ=255)

                                                           aacaaAGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGcccc                              >  2:876096/1‑93 (MQ=255)

                                                               aaGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACTCCCATTGCCATCCCCAgcg                          <  1:6309295/93‑1 (MQ=255)

                                                               aaGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAgcg                          >  1:1081764/1‑93 (MQ=255)

                                                                aGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAgcgc                         <  1:1658532/93‑1 (MQ=255)

                                                                aGCCGCGCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAgcgc                         <  2:4417686/93‑1 (MQ=255)

                                                                   cgcgCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGt                      <  2:3422628/93‑1 (MQ=255)

                                                                   cgcgCCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGt                      <  2:4921064/93‑1 (MQ=255)

                                                                      gcCAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCAGAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCAt                   >  2:4525788/1‑93 (MQ=255)

                                                                       ccAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATc                  <  1:1136223/93‑1 (MQ=255)

                                                                       ccAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATc                  >  1:3776784/1‑93 (MQ=255)

                                                                        cAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATcc                 <  1:4272683/93‑1 (MQ=255)

                                                                        cAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATcc                 <  1:4756904/93‑1 (MQ=255)

                                                                        cAGGCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATcc                 <  1:5531331/93‑1 (MQ=255)

                                                                          ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccag               >  2:2920414/1‑93 (MQ=255)

                                                                          ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccag               >  2:766559/1‑93 (MQ=255)

                                                                          ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccag               >  2:220937/1‑93 (MQ=255)

                                                                          ggCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccac               >  2:3721825/1‑92 (MQ=255)

                                                                           gCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccagc              >  2:5365093/1‑93 (MQ=255)

                                                                           gCGTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccagc              >  1:2227776/1‑93 (MQ=255)

                                                                             gTTGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATccagcca            <  1:5009028/93‑1 (MQ=255)

                                                                               tGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCaga          <  2:4370529/93‑1 (MQ=255)

                                                                               tGACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCaga          >  1:2414530/1‑93 (MQ=255)

                                                                                gACCATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCagag         <  1:2322302/93‑1 (MQ=255)

                                                                                   cATGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGAtt      <  2:2659239/93‑1 (MQ=255)

                                                                                    aTGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGAttt     >  1:5106598/1‑93 (MQ=255)

                                                                                    aTGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGAttt     >  1:4254501/1‑93 (MQ=255)

                                                                                     tGCGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtg    >  1:4827371/1‑93 (MQ=255)

                                                                                      gcggcgAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtgt   <  2:127698/93‑1 (MQ=255)

                                                                                      gcggcgAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtgt   >  2:3732736/1‑93 (MQ=255)

                                                                                       cGGCGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTtgtg  <  2:2773063/93‑1 (MQ=255)

TGGTGACAATAAAAACGCCGATGGCTTCGTTAAGTGTTAGTCCCTGCAATCCGGTGACCAACAAAGCCGCGCCAGGCGTTGACCATGCGGTGAGAACAGGTACGCGATACCATAATGTCAGAGTCAGCGTACTGACGCCCATTGCCAGCCCCAGCGCCGTCATCCAGCCAGAGATTTGTG  >  NC_000913/1503804‑1503983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`