BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,512,523	A→G	A223A (GCA→GCG)	b1442 →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,512,523	0	A	G	100.0%	634.4 / NA	185	A223A (GCA→GCG)	b1442	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (88/97); total (88/97)

Only 100 of 198 total aligned reads displayed.

TATCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACT  >  NC_000913/1512433‑1512612

tatCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGcgcgcg                                                                                         >  1:2730859/1‑93 (MQ=255)

 atCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGt                                                                                        <  2:2794504/93‑1 (MQ=255)

 atCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGt                                                                                        <  2:6105889/93‑1 (MQ=255)

   cTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTcc                                                                                      <  1:1644641/93‑1 (MQ=255)

    tGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCa                                                                                     <  2:1530228/93‑1 (MQ=255)

    tGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCa                                                                                     >  2:4966017/1‑93 (MQ=255)

        tGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGAc                                                                                 >  1:1005377/1‑93 (MQ=255)

        tGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGAc                                                                                 >  1:2087881/1‑93 (MQ=255)

         gCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACa                                                                                >  2:200167/1‑93 (MQ=255)

         gCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACa                                                                                >  2:3094271/1‑93 (MQ=255)

            gTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAAc                                                                             >  2:1951723/1‑93 (MQ=255)

            gTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAAc                                                                             <  2:1191331/93‑1 (MQ=255)

             ttCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAAcc                                                                            >  2:2268890/1‑93 (MQ=255)

             ttCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAAcc                                                                            >  2:2732481/1‑93 (MQ=255)

              tCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCt                                                                           <  2:161356/93‑1 (MQ=255)

                aTGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCttt                                                                         >  1:1784305/1‑93 (MQ=255)

                aTGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCttt                                                                         >  2:37856/1‑93 (MQ=255)

                aTGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCttt                                                                         <  1:3050449/93‑1 (MQ=255)

                 tGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTc                                                                        <  2:2500270/93‑1 (MQ=255)

                 tGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTc                                                                        >  2:6056658/1‑93 (MQ=255)

                  gATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCg                                                                       >  1:6042965/1‑93 (MQ=255)

                   aTCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGc                                                                      <  1:5609625/93‑1 (MQ=255)

                   aTCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGc                                                                      >  1:767472/1‑93 (MQ=255)

                   aTCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGc                                                                      >  1:5826859/1‑93 (MQ=255)

                    tCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCt                                                                     <  1:4569106/93‑1 (MQ=255)

                      cTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTAt                                                                   <  2:2395528/93‑1 (MQ=255)

                       tGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTAtg                                                                  >  1:3842002/1‑93 (MQ=255)

                         cccGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTAtgtg                                                                <  1:2933682/93‑1 (MQ=255)

                         cccGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTAtgtg                                                                <  2:4099516/93‑1 (MQ=255)

                            gTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATgtggtg                                                             >  2:6271130/1‑93 (MQ=255)

                            gTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATgtggtg                                                             <  1:799867/93‑1 (MQ=255)

                            gTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATgtggtg                                                             >  1:5760280/1‑93 (MQ=255)

                            gTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATgtggtg                                                             >  1:5051999/1‑93 (MQ=255)

                              tCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGtgct                                                           <  1:4076885/93‑1 (MQ=255)

                                aGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGtgctgc                                                         <  1:137797/93‑1 (MQ=255)

                                aGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGtgctgc                                                         >  1:633515/1‑93 (MQ=255)

                                 ggcggcGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGcc                                                        >  2:5523996/1‑93 (MQ=255)

                                  gcggcgCGTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCg                                                       <  1:3230567/93‑1 (MQ=255)

                                    ggcgCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCt                                                     >  1:3424056/1‑93 (MQ=255)

                                     gcgcTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTg                                                    <  2:1756469/93‑1 (MQ=255)

                                      cgcTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTgg                                                   <  1:5223584/93‑1 (MQ=255)

                                        cTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCa                                                 >  1:5923116/1‑93 (MQ=255)

                                        cTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCa                                                 >  1:3981188/1‑93 (MQ=255)

                                         ttGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCaa                                                <  1:5289800/93‑1 (MQ=255)

                                         ttGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCaa                                                >  2:4008945/1‑93 (MQ=255)

                                           gAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATc                                              >  2:372082/1‑93 (MQ=255)

                                            aGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATcc                                             >  2:2163342/1‑93 (MQ=255)

                                            aGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATcc                                             <  1:1219017/93‑1 (MQ=255)

                                            aGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATcc                                             >  2:3694917/1‑93 (MQ=255)

                                             gCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATccc                                            >  2:3535616/1‑93 (MQ=255)

                                              cttttGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCg                                           <  2:458444/91‑1 (MQ=255)

                                                 ttGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGt                                        <  1:4303726/93‑1 (MQ=255)

                                                 ttGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGt                                        <  2:5173340/93‑1 (MQ=255)

                                                 ttGCCGCCGTCATTGTTGCAGGCATCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGt                                        <  1:4109905/93‑1 (MQ=255)

                                                    ccgccgTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTAtt                                     <  2:734624/93‑1 (MQ=255)

                                                    ccgccgTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTAtt                                     <  1:5004576/93‑1 (MQ=255)

                                                     cgccgTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTg                                    <  2:297035/93‑1 (MQ=255)

                                                       ccgTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGcc                                  >  1:2550178/1‑93 (MQ=255)

                                                        cgTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCg                                 <  1:4219262/93‑1 (MQ=255)

                                                         gTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGc                                >  1:1610020/1‑93 (MQ=255)

                                                          tCATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCt                               <  2:5068782/93‑1 (MQ=255)

                                                           cATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTg                              <  2:635443/93‑1 (MQ=255)

                                                           cATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTg                              >  2:3148214/1‑93 (MQ=255)

                                                           cATTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGCGGTGCTGCCGCTGGCAATCCCGGGAATTGCCGccg                              >  1:1997150/1‑91 (MQ=255)

                                                            aTTGTTGCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTgg                             <  1:977569/93‑1 (MQ=255)

                                                             ttgttgCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGc                            <  2:2461433/93‑1 (MQ=255)

                                                             ttcttgCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGc                            <  1:555014/90‑1 (MQ=255)

                                                               gttgCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGctc                          <  1:6205547/93‑1 (MQ=255)

                                                                ttgCAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGctct                         <  1:6082487/93‑1 (MQ=255)

                                                                   cAGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATc                      <  1:1724558/93‑1 (MQ=255)

                                                                    agccGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCt                     <  1:2236510/90‑1 (MQ=255)

                                                                    aGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCt                     <  1:6170633/93‑1 (MQ=255)

                                                                    aGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCt                     <  2:3273861/93‑1 (MQ=255)

                                                                    aGGCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCt                     <  2:3408597/93‑1 (MQ=255)

                                                                     ggCGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCtt                    <  2:5380585/93‑1 (MQ=255)

                                                                       cGTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTa                  <  1:6291805/93‑1 (MQ=255)

                                                                        gTCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTAc                 >  1:228622/1‑93 (MQ=255)

                                                                         tCGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTAcc                >  1:5868113/1‑93 (MQ=255)

                                                                          cGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCt               >  1:4645160/1‑93 (MQ=255)

                                                                          cGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCt               >  2:5643294/1‑93 (MQ=255)

                                                                          cGGCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCt               <  1:4253020/93‑1 (MQ=255)

                                                                           ggCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCtt              <  2:4804746/93‑1 (MQ=255)

                                                                            gCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTtc             <  2:2049645/93‑1 (MQ=255)

                                                                            gCTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTtc             <  2:6170305/93‑1 (MQ=255)

                                                                             cTGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTtct            <  1:381414/93‑1 (MQ=255)

                                                                              tGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTtctc           >  2:5779215/1‑93 (MQ=255)

                                                                              tGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTtctc           <  1:4724058/93‑1 (MQ=255)

                                                                              tGATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTtctc           >  1:3735368/1‑93 (MQ=255)

                                                                               gATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctca          <  2:1050459/93‑1 (MQ=255)

                                                                               gATCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctca          >  1:2956172/1‑93 (MQ=255)

                                                                                aTCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctcac         <  2:4237408/93‑1 (MQ=255)

                                                                                aTCTCGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctcac         <  1:3478746/93‑1 (MQ=255)

                                                                                  ctcGGCGCGCGTCCACGACAATCCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctcactc       <  1:1446066/93‑1 (MQ=255)

                                                                                  ctcGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctcactc       <  2:1859568/93‑1 (MQ=255)

                                                                                   tcGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctcactca      >  2:4755253/1‑93 (MQ=255)

                                                                                   tcGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctcactca      >  1:3434819/1‑93 (MQ=255)

                                                                                   ccGGCGCGCGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTctcactca      <  1:6405157/92‑1 (MQ=255)

                                                                                      gcgcgcGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCacac   <  2:4398052/93‑1 (MQ=255)

                                                                                      gcgcgcGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCacac   >  1:1896718/1‑93 (MQ=255)

                                                                                       cgcgcgTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACt  <  1:3677327/93‑1 (MQ=255)

TATCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACT  >  NC_000913/1512433‑1512612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`