BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,585,075	A→G	S228S (AGT→AGC)	b1502 ←	putative adhesin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,585,075	0	A	G	100.0%	612.6 / NA	176	S228S (AGT→AGC)	b1502	putative adhesin
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (82/94); total (82/94)

Only 100 of 188 total aligned reads displayed.

AGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAA  >  NC_000913/1584985‑1585164

aGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGgctgct                                                                                         >  1:243980/1‑93 (MQ=255)

aGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGGCGgctgct                                                                                         >  1:2606949/1‑93 (MQ=255)

 gCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGctgctg                                                                                        >  2:2139044/1‑93 (MQ=255)

 gCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGctgctg                                                                                        >  2:5390542/1‑93 (MQ=255)

  ccAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGt                                                                                       >  1:5319962/1‑93 (MQ=255)

  ccAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGt                                                                                       >  2:1653735/1‑93 (MQ=255)

  ccAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGCGCTGTGTTAGCAAACACTTGTCGGctgctgc                                                                                       >  1:4282670/1‑92 (MQ=255)

   cAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTc                                                                                      >  1:4810269/1‑93 (MQ=255)

    aGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCa                                                                                     >  2:1511332/1‑93 (MQ=255)

     gTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAg                                                                                    <  1:5651559/93‑1 (MQ=255)

      tATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgt                                                                                   <  1:3503692/93‑1 (MQ=255)

       aTTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtg                                                                                  >  2:1601015/1‑93 (MQ=255)

        tttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtgg                                                                                 <  2:4419807/93‑1 (MQ=255)

        tttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtgg                                                                                 >  1:4640054/1‑93 (MQ=255)

        tttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtgg                                                                                 <  2:886539/93‑1 (MQ=255)

         ttttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtggt                                                                                <  2:2856606/93‑1 (MQ=255)

          tttCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAgtggtg                                                                               <  1:1958630/93‑1 (MQ=255)

            tCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGc                                                                             <  2:1521398/93‑1 (MQ=255)

             ccATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGtggtggaa                                                                            >  1:2204995/1‑91 (MQ=255)

                ttACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCAccc                                                                         >  1:747895/1‑93 (MQ=255)

                ttACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCAccc                                                                         <  1:1264277/93‑1 (MQ=255)

                    gCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGaaa                                                                     <  2:2315410/93‑1 (MQ=255)

                     cATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAg                                                                    <  2:3218720/93‑1 (MQ=255)

                       ttAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGAt                                                                  <  2:4944786/93‑1 (MQ=255)

                       ttAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGAt                                                                  >  1:3955105/1‑93 (MQ=255)

                         agagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATaa                                                                >  1:4327960/1‑93 (MQ=255)

                         agagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCCAAAGATaa                                                                >  2:4127115/1‑93 (MQ=255)

                          gagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATaaa                                                               <  2:4309871/93‑1 (MQ=255)

                          gagTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATaaa                                                               >  1:5172143/1‑93 (MQ=255)

                            gTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAAt                                                             >  1:663851/1‑93 (MQ=255)

                            gTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAAt                                                             >  2:6379189/1‑93 (MQ=255)

                             tGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATg                                                            <  2:1935473/93‑1 (MQ=255)

                              gACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATga                                                           <  1:4919262/93‑1 (MQ=255)

                               acacCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATgag                                                          >  2:6261147/1‑93 (MQ=255)

                               acacCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATgag                                                          <  1:5877569/93‑1 (MQ=255)

                                cacCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATgaga                                                         <  2:6246822/93‑1 (MQ=255)

                                 acCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGagag                                                        >  1:3027413/1‑93 (MQ=255)

                                 acCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGagag                                                        <  2:4535098/93‑1 (MQ=255)

                                   ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt                                                      >  1:6408889/1‑93 (MQ=255)

                                   ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt                                                      >  1:5721123/1‑93 (MQ=255)

                                   ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt                                                      >  2:3856803/1‑93 (MQ=255)

                                   ccACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCt                                                      <  1:1021713/93‑1 (MQ=255)

                                    cACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCtt                                                     >  2:983627/1‑93 (MQ=255)

                                     ccTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt                                                    <  1:3108919/92‑1 (MQ=255)

                                     ccTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt                                                    <  2:2492038/92‑1 (MQ=255)

                                     ccTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt                                                    <  2:2025965/92‑1 (MQ=255)

                                     aCTCCCGATGCTTTTGTTGAATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCttt                                                    >  1:6297776/1‑93 (MQ=255)

                                      cTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCtttt                                                   >  2:2330225/1‑93 (MQ=255)

                                       tCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTg                                                  >  1:4102199/1‑93 (MQ=255)

                                        cccGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGt                                                 >  1:6010732/1‑93 (MQ=255)

                                          cGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTc                                               >  2:2235899/1‑93 (MQ=255)

                                          cGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTc                                               <  2:2211112/93‑1 (MQ=255)

                                          cGATGCTTTTCTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGGTAAAATGAGAGCTTTTGTTc                                               >  2:4335184/1‑93 (MQ=255)

                                           gATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCg                                              <  1:5253433/93‑1 (MQ=255)

                                           gATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCg                                              >  2:5286458/1‑93 (MQ=255)

                                            aTGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGc                                             <  2:2989004/93‑1 (MQ=255)

                                            aTGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGc                                             >  1:2097073/1‑93 (MQ=255)

                                             tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt                                            >  2:6109409/1‑93 (MQ=255)

                                             tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt                                            >  2:839830/1‑93 (MQ=255)

                                             tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt                                            >  2:4870193/1‑93 (MQ=255)

                                             tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt                                            <  2:749147/93‑1 (MQ=255)

                                             tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt                                            <  1:5799272/93‑1 (MQ=255)

                                             tGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCt                                            >  2:5863133/1‑93 (MQ=255)

                                              gCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCtt                                           <  1:2000657/93‑1 (MQ=255)

                                              gCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCtt                                           <  1:3033072/93‑1 (MQ=255)

                                               cTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTg                                          >  2:681213/1‑93 (MQ=255)

                                               cTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTg                                          <  1:4941785/93‑1 (MQ=255)

                                               cTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTg                                          >  2:4790694/1‑93 (MQ=255)

                                                ttttGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGa                                         >  2:3237819/1‑93 (MQ=255)

                                                ttttGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGa                                         >  2:1768565/1‑93 (MQ=255)

                                                 tttGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAg                                        <  1:1073897/93‑1 (MQ=255)

                                                    gttgCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCaa                                     <  2:5455895/93‑1 (MQ=255)

                                                         aTCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATAc                                <  2:3618371/93‑1 (MQ=255)

                                                         aTCAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATAc                                >  1:5502941/1‑93 (MQ=255)

                                                          tCAGGTGCTGTGTTAGCCAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACg                               >  1:3128914/1‑93 (MQ=255)

                                                           cAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGc                              <  1:628492/93‑1 (MQ=255)

                                                           cAGGTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGc                              <  2:499001/93‑1 (MQ=255)

                                                             ggTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCa                            <  1:4580622/93‑1 (MQ=255)

                                                             ggTGCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCa                            >  2:3401623/1‑93 (MQ=255)

                                                                gCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAgg                         <  2:4826147/93‑1 (MQ=255)

                                                                gCTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAgg                         >  2:1312589/1‑93 (MQ=255)

                                                                 cTGTGTTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAggg                        >  2:1539305/1‑93 (MQ=255)

                                                                    tgtTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTa                     <  2:2612279/93‑1 (MQ=255)

                                                                     gtTAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAt                    >  2:4509591/1‑93 (MQ=255)

                                                                      ttAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAtt                   <  1:1467656/93‑1 (MQ=255)

                                                                       tAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAttt                  >  1:4330437/1‑93 (MQ=255)

                                                                       tAGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTAttt                  >  1:5350981/1‑93 (MQ=255)

                                                                        aGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGGCAAGGGGTATTTc                 >  2:4380337/1‑93 (MQ=255)

                                                                        aGCAAACACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTc                 <  2:12144/93‑1 (MQ=255)

                                                                           aaaCACTTGTCGGCTGCTGTCAGTGGTGGCGCCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgc              <  1:1898884/93‑1 (MQ=255)

                                                                           aaaCACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgc              >  2:4208486/1‑93 (MQ=255)

                                                                            aaCACTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgcg             >  1:1606788/1‑93 (MQ=255)

                                                                             acacTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTgcgc            <  2:5179077/93‑1 (MQ=255)

                                                                                cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc         <  1:899465/93‑1 (MQ=255)

                                                                                cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc         <  1:6253096/93‑1 (MQ=255)

                                                                                cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc         >  1:3274414/1‑93 (MQ=255)

                                                                                cTTGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTc         >  1:2810820/1‑93 (MQ=255)

                                                                                  tGTCGGCTGCTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCa       <  2:4178851/93‑1 (MQ=255)

                                                                                       gctgctGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGaaa  >  1:167066/1‑93 (MQ=255)

                                                                                       gctgctGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGaaa  <  2:6426156/93‑1 (MQ=255)

AGCCAGTATTTTTCCATTACGCATTAGAGTGACACCCACTCCCGATGCTTTTGTTGCATCAGGTGCTGTGTTAGCAAACACTTGTCGGCTACTGTCAGTGGTGGCACCCGAAAGATAAAATGAGAGCTTTTGTTCGCTTGAGCAATATACGCCAAGGGGTATTTCTGCGCTTCCAGGAAA  >  NC_000913/1584985‑1585164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`