BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,609,760	G→A	A40V (GCC→GTC)	b1522 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,609,760	0	G	A	100.0%	932.4 / NA	239	A40V (GCC→GTC)	b1522	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (127/112); total (127/112)

Only 100 of 243 total aligned reads displayed.

GCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGGCGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAG  >  NC_000913/1609670‑1609849

gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg                                                                                         >  2:4741157/1‑93 (MQ=255)

gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg                                                                                         <  2:2240554/93‑1 (MQ=255)

gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg                                                                                         >  2:1396260/1‑93 (MQ=255)

gCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg                                                                                         >  2:5957034/1‑93 (MQ=255)

gCACACCAGATTAATGCAGGCAGCGCGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACg                                                                                         <  1:1197097/93‑1 (MQ=255)

 cacaCCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACgg                                                                                        >  2:1578214/1‑93 (MQ=255)

 cacaCCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACgg                                                                                        >  1:3951258/1‑93 (MQ=255)

   cacCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGc                                                                                      >  1:2226078/1‑93 (MQ=255)

   cacCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGc                                                                                      >  1:2517991/1‑93 (MQ=255)

     ccAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGcat                                                                                    >  1:5804968/1‑93 (MQ=255)

      cAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGcatc                                                                                   >  1:1059925/1‑93 (MQ=255)

       aGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAGGGGCGCTGAAGGGcatga                                                                                  >  2:6011624/1‑91 (MQ=255)

         aTTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCatcatc                                                                                >  2:2550190/1‑93 (MQ=255)

           tAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTg                                                                              >  1:3136737/1‑93 (MQ=255)

           tAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTg                                                                              <  2:3574448/93‑1 (MQ=255)

            aaTGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGt                                                                             <  1:6449873/93‑1 (MQ=255)

             aTGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGtt                                                                            >  2:1301837/1‑93 (MQ=255)

              tGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTc                                                                           <  2:4367871/93‑1 (MQ=255)

              tGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTc                                                                           <  2:5404944/93‑1 (MQ=255)

                  ggcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCt                                                                       <  1:558980/93‑1 (MQ=255)

                  ggcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCt                                                                       >  2:4851150/1‑93 (MQ=255)

                   gcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCtt                                                                      <  1:4057545/93‑1 (MQ=255)

                   gcagCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCtt                                                                      <  1:2034079/93‑1 (MQ=255)

                     agCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTa                                                                    <  1:857941/93‑1 (MQ=255)

                      gCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTaa                                                                   >  2:3506783/1‑93 (MQ=255)

                        gggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAg                                                                 >  2:4515501/1‑93 (MQ=255)

                         ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc                                                                <  1:4345667/93‑1 (MQ=255)

                         ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc                                                                >  1:4634245/1‑93 (MQ=255)

                         ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc                                                                <  2:4421317/93‑1 (MQ=255)

                         ggAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgc                                                                >  2:1937437/1‑93 (MQ=255)

                          gAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgcg                                                               >  2:5969933/1‑93 (MQ=255)

                           aaCGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgcgc                                                              >  1:1351930/1‑93 (MQ=255)

                           aaCGCCAGACTCCCCGCTCCGCCAATAACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAgcgc                                                              <  1:6103340/93‑1 (MQ=255)

                            aCGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGcgcg                                                             <  1:4214939/93‑1 (MQ=255)

                            aCGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGcgcg                                                             >  2:5501481/1‑93 (MQ=255)

                            aCGCCAGACTCCCCGCTCAGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGcgcg                                                             >  2:134729/1‑93 (MQ=255)

                             cGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCgg                                                            <  1:347835/93‑1 (MQ=255)

                             cGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCgg                                                            <  2:195471/93‑1 (MQ=255)

                               ccAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgca                                                          <  2:6409239/93‑1 (MQ=255)

                                cAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcag                                                         >  1:4563489/1‑93 (MQ=255)

                                 aGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagc                                                        <  2:5175441/93‑1 (MQ=255)

                                 aGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagc                                                        >  2:6452056/1‑93 (MQ=255)

                                 aGACTCCCCGCTCCGCCAAAGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagc                                                        >  1:6275527/1‑93 (MQ=255)

                                  gACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagca                                                       >  1:4958690/1‑93 (MQ=255)

                                  gACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGgcagca                                                       >  1:3729371/1‑93 (MQ=255)

                                   aCTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCAc                                                      <  2:4048040/93‑1 (MQ=255)

                                   aCTCCCCGCACCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCAc                                                      <  2:5806905/93‑1 (MQ=255)

                                     tCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTc                                                    >  1:5190056/1‑93 (MQ=255)

                                     tCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTc                                                    >  1:2796218/1‑93 (MQ=255)

                                     tCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTc                                                    >  2:313886/1‑93 (MQ=255)

                                      ccccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTcc                                                   <  1:3077053/93‑1 (MQ=255)

                                       cccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTcct                                                  <  2:6089972/93‑2 (MQ=255)

                                       cccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCa                                                  <  2:663286/93‑1 (MQ=255)

                                        ccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAg                                                 >  1:3236441/1‑93 (MQ=255)

                                        ccGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAg                                                 <  1:767131/93‑1 (MQ=255)

                                            tCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAAt                                             <  2:1452624/93‑1 (MQ=255)

                                             ccGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATa                                            >  2:4278887/1‑93 (MQ=255)

                                             ccGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATa                                            <  2:2566045/93‑1 (MQ=255)

                                             ccGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATa                                            >  2:2140591/1‑93 (MQ=255)

                                              cGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACTGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAg                                           >  2:2809740/1‑93 (MQ=255)

                                              cGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAg                                           <  1:4898990/93‑1 (MQ=255)

                                              cGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAg                                           >  1:2292923/1‑93 (MQ=255)

                                                ccAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGcc                                         <  2:3742389/93‑1 (MQ=255)

                                                  aaTGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCaa                                       >  2:1075524/1‑93 (MQ=255)

                                                   aTGACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAAc                                      <  1:3426926/93‑1 (MQ=255)

                                                     gACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGt                                    <  2:3000864/93‑1 (MQ=255)

                                                     gACTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGt                                    >  1:2956033/1‑93 (MQ=255)

                                                       cTACCGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCa                                  >  1:3584183/1‑93 (MQ=255)

                                                          ccGAGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCa                               >  1:3307298/1‑93 (MQ=255)

                                                             aGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATAc                            >  1:1824845/1‑93 (MQ=255)

                                                             aGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATAc                            >  2:6231408/1‑93 (MQ=255)

                                                             aGGCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATAc                            <  2:2706095/93‑1 (MQ=255)

                                                              ggCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACa                           >  2:5882043/1‑93 (MQ=255)

                                                              ggCAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACa                           >  1:4797517/1‑93 (MQ=255)

                                                                cAATAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAg                         >  1:2367662/1‑93 (MQ=255)

                                                                 aaTAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAgg                        >  1:3758492/1‑93 (MQ=255)

                                                                  aTAACCGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGc                       <  1:4868027/93‑1 (MQ=255)

                                                                      ccGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGa                   <  2:779880/93‑1 (MQ=255)

                                                                      ccGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGa                   <  1:5942740/93‑1 (MQ=255)

                                                                       cGACACAATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGAt                  <  2:1214900/93‑1 (MQ=255)

                                                                          cacaATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCaa               >  2:2024140/1‑93 (MQ=255)

                                                                           acaATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAac              <  1:1223442/93‑1 (MQ=255)

                                                                            caATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAaca             >  1:1143997/1‑93 (MQ=255)

                                                                            caATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAaca             >  1:5705207/1‑93 (MQ=255)

                                                                            caATAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAaca             <  2:5250241/93‑1 (MQ=255)

                                                                             aaTAAGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAacac            >  1:1682426/1‑93 (MQ=255)

                                                                                aaGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCGAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGcc         <  2:3432394/93‑1 (MQ=255)

                                                                                aaGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGcc         <  2:3696279/93‑1 (MQ=255)

                                                                                 aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGACTAGCCAACGTCAGCATACAAGGCACGATCAACACGccc        >  2:2621571/1‑93 (MQ=255)

                                                                                 aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc        <  2:5287733/93‑1 (MQ=255)

                                                                                 aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc        <  2:4453077/93‑1 (MQ=255)

                                                                                 aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc        >  1:5657087/1‑93 (MQ=255)

                                                                                 aGCGCGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGccc        <  1:2426058/93‑1 (MQ=255)

                                                                                  gcgcGATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCg       >  2:3007611/1‑93 (MQ=255)

                                                                                   cgcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGt      <  2:2162484/93‑1 (MQ=255)

                                                                                    gcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGtt     <  2:3297264/93‑1 (MQ=255)

                                                                                    gcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGtt     >  1:5557393/1‑93 (MQ=255)

                                                                                    gcgATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGtt     >  2:3865539/1‑93 (MQ=255)

                                                                                     cgATGACGGGCATCATCTGTTCTGCTTTACAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTg    <  2:2493742/93‑1 (MQ=255)

                                                                                      gATGACGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCTCGATCAACACGCCCGTTga   <  1:6325127/93‑1 (MQ=255)

GCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGACACAATAAGCGCGATGGCGGGCATCATCTGTTCTGCTTTAAAGCGCGGCAGCACTCCAGGAATAGCCAACGTCAGCATACAAGGCACGATCAACACGCCCGTTGAG  >  NC_000913/1609670‑1609849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`