BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,668,733	A→G	S337S (TCA→TCG)	ynfM →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,668,733	0	A	G	100.0%	764.2 / NA	219	S337S (TCA→TCG)	ynfM	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (113/106); total (113/106)

Only 100 of 229 total aligned reads displayed.

GTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT  >  NC_000913/1668643‑1668822

 ttgttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTcggca                                                                                        >  2:5459309/1‑93 (MQ=255)

 ttgttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTcggca                                                                                        <  2:3667195/93‑1 (MQ=255)

   gttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTTGGCAgg                                                                                      >  1:4105299/1‑93 (MQ=255)

   gttTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAgg                                                                                      >  2:3365754/1‑93 (MQ=255)

       tCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttc                                                                                  <  2:5189093/93‑1 (MQ=255)

          aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc                                                                               <  2:5018295/93‑1 (MQ=255)

          aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc                                                                               <  1:2309938/93‑1 (MQ=255)

          aCGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGAttcttc                                                                               <  1:2165497/93‑1 (MQ=255)

            gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc                                                                             >  1:4164615/1‑93 (MQ=255)

            gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc                                                                             >  2:1237670/1‑93 (MQ=255)

            gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc                                                                             <  2:4195629/93‑1 (MQ=255)

            gggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGc                                                                             <  2:3248146/93‑1 (MQ=255)

             ggggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCa                                                                            >  1:1824602/1‑93 (MQ=255)

               ggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGc                                                                          <  2:241682/93‑1 (MQ=255)

               ggTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGc                                                                          <  2:5779249/93‑1 (MQ=255)

                  tATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCa                                                                       >  1:4606743/1‑93 (MQ=255)

                   aTGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCAc                                                                      >  2:5593573/1‑93 (MQ=255)

                    tGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACt                                                                     >  2:2658031/1‑93 (MQ=255)

                     gCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTc                                                                    <  1:705635/93‑1 (MQ=255)

                     gCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTc                                                                    <  1:6478965/93‑1 (MQ=255)

                     gCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGATACTCTTCTCCGCAGGATTCTTCGGCGCTCACTc                                                                    >  1:4769605/1‑93 (MQ=255)

                      cTGTTTGGTTTACTTATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCa                                                                   <  2:1560768/93‑1 (MQ=255)

                       tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg                                                                  <  2:4399092/93‑1 (MQ=255)

                       tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg                                                                  <  1:3774865/93‑1 (MQ=255)

                       tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg                                                                  >  2:4859089/1‑93 (MQ=255)

                       tGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAg                                                                  <  1:4665810/93‑1 (MQ=255)

                        gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTTCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGACCTCTCAGt                                                                 >  1:3365735/1‑93 (MQ=255)

                        gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt                                                                 >  1:5021615/1‑93 (MQ=255)

                        gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt                                                                 <  1:3404591/93‑1 (MQ=255)

                        gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt                                                                 <  2:1311409/93‑1 (MQ=255)

                        gTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGt                                                                 >  2:2450465/1‑93 (MQ=255)

                         tttGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTa                                                                <  2:88442/93‑1 (MQ=255)

                          ttGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAg                                                               <  2:1506172/93‑1 (MQ=255)

                            tgTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGcc                                                             <  1:5548366/92‑1 (MQ=255)

                            ggTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGcc                                                             >  2:1767513/1‑93 (MQ=255)

                             gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca                                                            <  1:100404/93‑1 (MQ=255)

                             gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca                                                            >  2:755485/1‑93 (MQ=255)

                             gTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCca                                                            <  2:5146575/93‑1 (MQ=255)

                              tttACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcag                                                           <  1:1473116/93‑1 (MQ=255)

                               ttACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCcagc                                                          <  2:2954517/93‑1 (MQ=255)

                                  cTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCagcagc                                                       <  2:3929469/93‑1 (MQ=255)

                                    gatgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTg                                                     <  1:1108225/93‑1 (MQ=255)

                                     atgaCCTTATTCAGCTCTCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTgg                                                    <  1:1904557/93‑1 (MQ=255)

                                      tgaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGa                                                   >  2:526877/1‑93 (MQ=255)

                                       gaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGAt                                                  >  1:5190516/1‑93 (MQ=255)

                                       gaCCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGAt                                                  <  1:5036541/93‑1 (MQ=255)

                                         ccTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCg                                                <  1:2634478/93‑1 (MQ=255)

                                          cTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCACACTCAGTAGCCAGCAGCTGGATCgg                                               >  1:844990/1‑93 (MQ=255)

                                          cTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTAGCAGCCCACTCAGTAGCCAGCAGCCGGATCgg                                               >  2:2815598/1‑93 (MQ=255)

                                               tCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGccccc                                          <  2:6275457/93‑1 (MQ=255)

                                                cAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcg                                         >  1:5171324/1‑93 (MQ=255)

                                                 aGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgc                                        >  2:2675490/1‑93 (MQ=255)

                                                  gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg                                       <  1:3713081/93‑1 (MQ=255)

                                                  gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg                                       >  2:2997907/1‑93 (MQ=255)

                                                  gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg                                       >  1:5898647/1‑93 (MQ=255)

                                                  gCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGACCACTCAGTAGCCAGCAGCTGGATCGGCCCCcgcg                                       >  1:2095587/1‑93 (MQ=255)

                                                       cTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCaaaa                                  <  1:4433836/93‑1 (MQ=255)

                                                       cTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCaaaa                                  >  1:2599411/1‑93 (MQ=255)

                                                       cTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCaaaa                                  <  2:4702899/93‑1 (MQ=255)

                                                         gtgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCCAAAcg                                >  1:5456924/1‑93 (MQ=255)

                                                         gtgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCCCGCCAAAcg                                >  2:619170/1‑93 (MQ=255)

                                                          tgGCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAcgc                               <  1:5351218/93‑1 (MQ=255)

                                                           ggCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAAcgcg                              >  2:80686/1‑93 (MQ=255)

                                                            gCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACgcgc                             <  1:2979342/93‑1 (MQ=255)

                                                            gCTGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACgcgc                             >  2:6406319/1‑93 (MQ=255)

                                                              tGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAACACGCGCTa                           >  2:2779199/1‑93 (MQ=255)

                                                              tGATCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTa                           >  2:542239/1‑93 (MQ=255)

                                                                aTCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTaaa                         <  1:2891638/93‑1 (MQ=255)

                                                                 tCTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAag                        <  2:6332058/93‑1 (MQ=255)

                                                                  cTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAagg                       <  2:2298387/93‑1 (MQ=255)

                                                                  cTTTGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAagg                       >  2:3087782/1‑93 (MQ=255)

                                                                   tttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggc                      <  1:2066186/93‑1 (MQ=255)

                                                                   tttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggc                      >  1:165502/1‑93 (MQ=255)

                                                                    ttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcc                     <  1:2260033/93‑1 (MQ=255)

                                                                    ttGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcc                     <  2:2118438/93‑1 (MQ=255)

                                                                     tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggcca                    <  1:3252303/93‑1 (MQ=255)

                                                                     tGCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCCCGCAAAACGCGCTAAaggcca                    >  1:549169/1‑93 (MQ=255)

                                                                      gCCGGAATGTTGCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAagtccag                   <  1:2783201/93‑1 (MQ=255)

                                                                      gCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccag                   <  2:529269/93‑1 (MQ=255)

                                                                      gCCGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccag                   <  1:1131747/93‑1 (MQ=255)

                                                                        cGGAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccaggc                 <  1:531500/93‑1 (MQ=255)

                                                                         ggAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAaggccaggcc                >  1:1601468/1‑93 (MQ=255)

                                                                          gAATGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcct               >  2:4464923/1‑93 (MQ=255)

                                                                            aTGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcctcc             >  1:1939157/1‑93 (MQ=255)

                                                                             tGTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGcctccc            >  2:1117706/1‑92 (MQ=255)

                                                                              gTTACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCctcctc           >  1:5979616/1‑93 (MQ=255)

                                                                                tACTCTTCTCGGCAGGATTCTTCGCAGCCCAGTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc         <  2:2701646/93‑1 (MQ=255)

                                                                                tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc         <  2:5924336/93‑1 (MQ=255)

                                                                                tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc         >  1:2288470/1‑93 (MQ=255)

                                                                                tACTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGc         <  1:5799782/93‑1 (MQ=255)

                                                                                 aCTCTTCTCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCt        <  1:3050043/93‑1 (MQ=255)

                                                                                   tcttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGt      <  1:1520381/93‑1 (MQ=255)

                                                                                    cttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTa     >  1:1461058/1‑93 (MQ=255)

                                                                                    cttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTa     >  2:4565688/1‑93 (MQ=255)

                                                                                     ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt    >  1:1238646/1‑93 (MQ=255)

                                                                                     ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt    <  2:5995196/93‑1 (MQ=255)

                                                                                     ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt    >  2:354746/1‑93 (MQ=255)

                                                                                     ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt    >  1:3141372/1‑93 (MQ=255)

                                                                                     ttctCGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTAt    <  2:2211739/93‑1 (MQ=255)

                                                                                       ctcGGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCt  <  1:6089551/93‑1 (MQ=255)

GTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCT  >  NC_000913/1668643‑1668822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`