BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,679,869	A→G	S62S (AGT→AGC)	ydgC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,679,869	0	A	G	100.0%	740.1 / NA	208	S62S (AGT→AGC)	ydgC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/104); total (104/104)

Only 100 of 209 total aligned reads displayed.

AGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGG  >  NC_000913/1679779‑1679958

 gAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTa                                                                                        >  2:1924996/1‑93 (MQ=255)

  aaCCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTaa                                                                                       <  2:212234/93‑1 (MQ=255)

   aCCAACAAAAGCGGCGGGCAAGCGCATTATTCCGGTGAAATACCACAGCGACACCAGGTAAACCAAATAGGGAATAATCGACCACATGCTaaa                                                                                      >  1:3974291/1‑93 (MQ=255)

   aCCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAAACGACCACATGCTaaa                                                                                      >  1:1274493/1‑93 (MQ=255)

     caacaaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTaaaaa                                                                                    >  1:1666952/1‑93 (MQ=255)

     caacaaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTaaaaa                                                                                    <  2:4885020/93‑1 (MQ=255)

      aacaaAAGCGGCGGGCAAGCGGATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAat                                                                                   >  1:4094226/1‑93 (MQ=255)

      aacaaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAat                                                                                   <  2:5893204/93‑1 (MQ=255)

        caaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGAGCACATGCTAAAAatga                                                                                 >  2:3367148/1‑93 (MQ=255)

        caaAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatga                                                                                 >  2:1041056/1‑93 (MQ=255)

         aaaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatgat                                                                                <  1:534694/93‑1 (MQ=255)

          aaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAGTCGACCACATGCTAAAAatgatg                                                                               <  1:5217483/93‑1 (MQ=255)

          aaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatgatg                                                                               <  1:1840982/93‑1 (MQ=255)

          aaaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAatgatg                                                                               >  2:6409685/1‑93 (MQ=255)

           aaGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATgg                                                                              >  1:4662917/1‑93 (MQ=255)

            aGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGt                                                                             <  2:181075/93‑1 (MQ=255)

            aGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGt                                                                             <  1:1143474/93‑1 (MQ=255)

             gcggcgGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGtt                                                                            <  1:4844062/93‑1 (MQ=255)

              cggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTg                                                                           <  2:5243735/93‑1 (MQ=255)

              cggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTg                                                                           <  2:2879328/93‑1 (MQ=255)

               ggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTgc                                                                          <  2:2276614/93‑1 (MQ=255)

               ggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTgc                                                                          <  1:1895228/93‑1 (MQ=255)

               ggcggGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTgc                                                                          <  2:4121810/93‑1 (MQ=255)

                   ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt                                                                      >  1:3327607/1‑93 (MQ=255)

                   ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt                                                                      >  2:3229315/1‑93 (MQ=255)

                   ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt                                                                      >  1:6257912/1‑93 (MQ=255)

                   ggCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGt                                                                      >  1:4938286/1‑93 (MQ=255)

                    gCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTa                                                                     <  2:4601376/93‑1 (MQ=255)

                     cAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTaa                                                                    <  2:513500/93‑1 (MQ=255)

                       aGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAgg                                                                  >  1:360374/1‑93 (MQ=255)

                       aGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAgg                                                                  >  2:567367/1‑93 (MQ=255)

                         cgcATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCt                                                                <  2:4212608/93‑1 (MQ=255)

                         cgcATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCt                                                                <  2:3027295/93‑1 (MQ=255)

                         cgcATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCt                                                                <  2:5332172/93‑1 (MQ=255)

                           catcatTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTc                                                              >  1:308408/1‑93 (MQ=255)

                           catcatTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTc                                                              <  2:4724841/93‑1 (MQ=255)

                             tcatTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCaa                                                            >  1:564969/1‑93 (MQ=255)

                                ttCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGc                                                         >  1:4600336/1‑93 (MQ=255)

                                  ccGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCcg                                                       <  2:83936/93‑1 (MQ=255)

                                     gTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGt                                                    >  2:1737875/1‑93 (MQ=255)

                                     gTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGt                                                    >  1:1377911/1‑93 (MQ=255)

                                      tGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGtt                                                   <  1:5838775/93‑1 (MQ=255)

                                      tGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGtt                                                   >  1:5871031/1‑93 (MQ=255)

                                      tGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGtt                                                   <  1:2572544/93‑1 (MQ=255)

                                       gAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTc                                                  >  2:5805838/1‑93 (MQ=255)

                                        aaaTACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCg                                                 <  1:2356266/93‑1 (MQ=255)

                                          aTACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCt                                               <  2:1345803/93‑1 (MQ=255)

                                          aTACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCt                                               <  1:2043551/93‑1 (MQ=255)

                                             ccACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGc                                            <  1:4429828/93‑1 (MQ=255)

                                                 aGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGcaaca                                        >  1:4124532/1‑93 (MQ=255)

                                                   cGACACCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAat                                      <  1:2700546/93‑1 (MQ=255)

                                                     acacCAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAatat                                    <  2:2964790/93‑1 (MQ=255)

                                                        ccAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAAt                                 >  2:5583674/1‑93 (MQ=255)

                                                         cAGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATg                                >  1:155537/1‑93 (MQ=255)

                                                          aGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATgc                               >  2:1655611/1‑93 (MQ=255)

                                                          aGGTAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATgc                               >  1:4294261/1‑93 (MQ=255)

                                                             tAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGcgcg                            <  2:6088311/93‑1 (MQ=255)

                                                             tAAACAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGcgcg                            >  1:5175529/1‑93 (MQ=255)

                                                               aaCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAt                          >  1:3723592/1‑93 (MQ=255)

                                                               aaCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAt                          >  1:5418791/1‑93 (MQ=255)

                                                               aaCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGAt                          >  2:3543362/1‑93 (MQ=255)

                                                                aCAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATa                         <  1:74010/93‑1 (MQ=255)

                                                                 cAAAATAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATaa                        <  1:1569625/93‑1 (MQ=255)

                                                                  aaaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAg                       >  2:5953417/1‑93 (MQ=255)

                                                                   aaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgc                      >  2:1091979/1‑93 (MQ=255)

                                                                   aaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgc                      <  1:1166741/93‑1 (MQ=255)

                                                                   aaaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgc                      <  1:2894738/93‑1 (MQ=255)

                                                                    aaTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGAGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAacg                     >  1:4354509/1‑93 (MQ=255)

                                                                     aTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgcgc                    <  2:1276497/93‑1 (MQ=255)

                                                                     aTAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAgcgc                    >  1:3275427/1‑93 (MQ=255)

                                                                      tAGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCa                   >  2:2420862/1‑93 (MQ=255)

                                                                       aGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCaa                  >  2:2663069/1‑93 (MQ=255)

                                                                       aGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCaa                  >  2:5056648/1‑93 (MQ=255)

                                                                       aGGGAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCaa                  >  1:2613401/1‑93 (MQ=255)

                                                                         ggAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCTCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAg                <  1:4466920/93‑1 (MQ=255)

                                                                         ggAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAg                >  1:1043523/1‑93 (MQ=255)

                                                                         ggAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAg                >  1:4505457/1‑93 (MQ=255)

                                                                          gAATAATCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAgg               <  1:3117000/93‑1 (MQ=255)

                                                                           aataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGt              <  2:2646987/93‑1 (MQ=255)

                                                                           aataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGt              >  2:571680/1‑93 (MQ=255)

                                                                            ataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTc             >  1:2134767/1‑93 (MQ=255)

                                                                            ataatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTc             >  2:5228639/1‑93 (MQ=255)

                                                                            acaatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTc             <  1:6424659/91‑1 (MQ=255)

                                                                              aatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCgg           <  1:5030253/93‑1 (MQ=255)

                                                                              aatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCgg           <  2:360375/93‑1 (MQ=255)

                                                                              aatCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCgg           <  2:5397345/93‑1 (MQ=255)

                                                                               atCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCggg          <  2:343109/93‑1 (MQ=255)

                                                                               atCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCggg          <  1:2985299/93‑1 (MQ=255)

                                                                               atCGACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAACGCGCGATAAGCGCAAAGGTCggg          <  1:6174662/93‑1 (MQ=255)

                                                                                  gACCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGaaa       >  2:3834003/1‑93 (MQ=255)

                                                                                   aCCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGaaaa      <  1:6311497/93‑1 (MQ=255)

                                                                                   aCCACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGaaaa      >  2:3879748/1‑93 (MQ=255)

                                                                                    ccACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAg     >  1:987059/1‑93 (MQ=255)

                                                                                    ccACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAg     <  2:2501659/93‑1 (MQ=255)

                                                                                    ccACATGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAg     <  2:3208539/93‑1 (MQ=255)

                                                                                     cacaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGt    >  2:1197791/1‑93 (MQ=255)

                                                                                      acaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTg   >  2:442086/1‑93 (MQ=255)

                                                                                      acaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTg   >  2:6329010/1‑93 (MQ=255)

                                                                                      acaTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTg   >  2:6337211/1‑93 (MQ=255)

                                                                                       caTGCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTgg  <  1:5599711/93‑1 (MQ=255)

AGAACCAACAAAAGCGGCGGGCAAGCGCATCATTCCGGTGAAATACCACAGCGACACCAGGTAAACAAAATAGGGAATAATCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGG  >  NC_000913/1679779‑1679958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`