BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,681,154	T→C	S83S (AGT→AGC)	rstB →	sensor histidine protein kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,681,154	0	T	C	100.0%	768.2 / NA	217	S83S (AGT→AGC)	rstB	sensor histidine protein kinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/105); total (112/105)

Only 100 of 219 total aligned reads displayed.

ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT  >  NC_000913/1681064‑1681243

aTTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaa                                                                                         <  1:4963013/93‑1 (MQ=255)

 ttGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaaa                                                                                        >  1:1576359/1‑93 (MQ=255)

 ttGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCaaa                                                                                        >  2:1568936/1‑93 (MQ=255)

    cGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATAc                                                                                     <  2:316267/93‑1 (MQ=255)

    cGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATAc                                                                                     <  1:5263095/93‑1 (MQ=255)

      tGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCa                                                                                   <  1:4691429/93‑1 (MQ=255)

       gagaCCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCAt                                                                                  <  1:1949122/93‑1 (MQ=255)

        agaTCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATc                                                                                 >  1:4262944/1‑93 (MQ=255)

         gaTCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCt                                                                                >  2:6189509/1‑93 (MQ=255)

          aTCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCtt                                                                               <  2:3035578/93‑1 (MQ=255)

           tCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtg                                                                              >  2:2916909/1‑93 (MQ=255)

           tCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtg                                                                              >  1:222493/1‑93 (MQ=255)

             cccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCACATACCATCTtgat                                                                            >  1:1668738/1‑93 (MQ=255)

             cccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgat                                                                            <  2:6446070/93‑1 (MQ=255)

              ccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatg                                                                           <  1:6012194/93‑1 (MQ=255)

              ccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatg                                                                           >  1:261398/1‑93 (MQ=255)

              ccccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatg                                                                           >  2:1176938/1‑93 (MQ=255)

               cccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTtgatga                                                                          <  1:5418147/93‑1 (MQ=255)

                ccACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTgatgat                                                                         >  2:2514584/1‑93 (MQ=255)

                  acacGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGatat                                                                       >  1:4347705/1‑93 (MQ=255)

                  acacGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGatat                                                                       <  2:1702240/93‑1 (MQ=255)

                  acacGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCAGTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGatat                                                                       <  2:637469/93‑1 (MQ=255)

                   cacGACTGGGGTAAAGCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATAtt                                                                      <  1:5952641/93‑1 (MQ=255)

                    acGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCAATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATAttt                                                                     <  1:2460796/93‑1 (MQ=255)

                     cGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTc                                                                    <  2:3410829/93‑1 (MQ=255)

                        cTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCAt                                                                 <  2:226057/93‑1 (MQ=255)

                         tGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATg                                                                <  2:3699497/93‑1 (MQ=255)

                          ggggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCTATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGc                                                               <  2:2824614/93‑1 (MQ=255)

                           gggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCa                                                              <  2:5892654/93‑1 (MQ=255)

                           gggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCa                                                              >  2:2727709/1‑93 (MQ=255)

                            ggTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAc                                                             <  2:2385780/93‑1 (MQ=255)

                            ggTAAAACTCTGAAAGAGATGGATTTAAACCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAc                                                             <  2:221885/93‑1 (MQ=255)

                             gTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAcc                                                            <  1:3589468/93‑1 (MQ=255)

                             gTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCAcc                                                            >  1:5659121/1‑93 (MQ=255)

                              tAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCg                                                           >  1:5822756/1‑93 (MQ=255)

                               aaaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGa                                                          >  2:2114317/1‑93 (MQ=255)

                               aaaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGa                                                          >  1:3950027/1‑93 (MQ=255)

                                aaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAc                                                         >  1:149987/1‑93 (MQ=255)

                                aaaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGAc                                                         <  2:5128575/93‑1 (MQ=255)

                                 aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt                                                        <  1:5785867/93‑1 (MQ=255)

                                 aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt                                                        >  1:3889270/1‑93 (MQ=255)

                                 aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt                                                        <  1:4742513/93‑1 (MQ=255)

                                 aaCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACt                                                        <  2:4913181/93‑1 (MQ=255)

                                  aCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTg                                                       >  2:5066226/1‑93 (MQ=255)

                                  aCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTg                                                       <  1:1109093/93‑1 (MQ=255)

                                  aCTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTg                                                       >  2:5368373/1‑93 (MQ=255)

                                   ctctGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGc                                                      >  1:1770670/1‑93 (MQ=255)

                                    tctGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTTGAGTCACTGAGCAAATACCATCTTGATGATATTTCCATACACCGACcgcg                                                     >  1:4568593/1‑93 (MQ=255)

                                     ctGAAAGAGATGGATTTAAATCTTTCTTTCGGTCTGCGTGGCGAGCAACTGAGCAAATACCATCTTGATGATATTTCCATGCATCGACTGCGt                                                    <  1:3061037/93‑1 (MQ=255)

                                     ctGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGt                                                    <  2:4136835/93‑1 (MQ=255)

                                       gAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTgg                                                  >  2:5231634/1‑93 (MQ=255)

                                        aaaGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggc                                                 >  2:665380/1‑93 (MQ=255)

                                        aaaGAGAGGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggc                                                 <  2:4570714/93‑1 (MQ=255)

                                          agagATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcgg                                               <  1:690707/93‑1 (MQ=255)

                                          agagATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcgg                                               >  1:651502/1‑93 (MQ=255)

                                           gagaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTggcggc                                              <  1:3429418/93‑1 (MQ=255)

                                            agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg                                             >  1:6114810/1‑93 (MQ=255)

                                            agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg                                             <  1:2421023/93‑1 (MQ=255)

                                            agaTGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGgcggcg                                             >  2:4397750/1‑93 (MQ=255)

                                                   tttAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGGAATTGt                                      >  2:1650962/1‑93 (MQ=255)

                                                   tttAAATCGCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGt                                      <  1:5358690/93‑1 (MQ=255)

                                                        aTCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGccc                                 <  1:2077708/93‑1 (MQ=255)

                                                        aTCTCTCTTGCGATCTGCATGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGccc                                 <  2:3953251/93‑1 (MQ=255)

                                                         tctctcTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCt                                <  1:4114258/93‑1 (MQ=255)

                                                         tctctcTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCt                                <  1:5092788/93‑1 (MQ=255)

                                                         tctctcTTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCt                                <  2:2447528/93‑1 (MQ=255)

                                                          ttctttTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTg                               <  2:1995782/92‑1 (MQ=255)

                                                          ctctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTg                               <  2:4321896/93‑1 (MQ=255)

                                                          ctctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTg                               <  2:6300592/93‑1 (MQ=255)

                                                           tctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTgg                              >  2:5818961/1‑93 (MQ=255)

                                                            ctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTggc                             >  2:3737465/1‑92 (MQ=255)

                                                            ctctTTCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGa                             >  1:4378246/1‑93 (MQ=255)

                                                                ttCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGAt                         <  2:1318366/93‑1 (MQ=255)

                                                                 tCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATc                        >  2:3768689/1‑93 (MQ=255)

                                                                 tCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATc                        >  2:216781/1‑93 (MQ=255)

                                                                 tCGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATc                        >  2:198076/1‑93 (MQ=255)

                                                                  cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa                       <  1:3187960/93‑1 (MQ=255)

                                                                  cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa                       >  2:2552978/1‑93 (MQ=255)

                                                                  cGATCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCa                       >  1:6430614/1‑93 (MQ=255)

                                                                    aTCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGt                     <  1:3826439/93‑1 (MQ=255)

                                                                    aTCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGt                     >  2:4000663/1‑93 (MQ=255)

                                                                     tCTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTa                    >  1:5078703/1‑93 (MQ=255)

                                                                      cTGCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTac                   <  2:332508/93‑1 (MQ=255)

                                                                        gCGTGTCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTacac                 <  1:832784/93‑1 (MQ=255)

                                                                           tgtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGtt              <  2:900093/93‑1 (MQ=255)

                                                                            gtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGttt             <  1:2786560/93‑1 (MQ=255)

                                                                            gtCGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGttt             <  2:6029885/93‑1 (MQ=255)

                                                                            gacGAGCCACTGAGCAAATCCCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATCGTCGCCCTGGACGATCAGTACACGttt             <  1:4107747/91‑1 (MQ=255)

                                                                              cGAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGttttt           <  2:1428966/93‑1 (MQ=255)

                                                                               gAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTg          >  2:796376/1‑93 (MQ=255)

                                                                               gAGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTg          >  1:3225098/1‑93 (MQ=255)

                                                                                aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc         >  2:3082/1‑93 (MQ=255)

                                                                                aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc         >  2:3097842/1‑93 (MQ=255)

                                                                                aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc         <  1:3667293/93‑1 (MQ=255)

                                                                                aGCCACTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGc         >  2:2840318/1‑93 (MQ=255)

                                                                                    aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGTAgtg     >  1:5240607/1‑91 (MQ=255)

                                                                                    aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCg     >  2:1743004/1‑93 (MQ=255)

                                                                                    aCTGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCg     <  2:1010133/93‑1 (MQ=255)

                                                                                      tGAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTa   <  1:4861138/93‑1 (MQ=255)

                                                                                       gAGCAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAt  <  1:2908143/93‑1 (MQ=255)

ATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTAT  >  NC_000913/1681064‑1681243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`