BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,767,503	A→G	T136A (ACG→GCG)	b1688 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,767,503	0	A	G	98.5%	655.2 / 1.8	195	coding (406/1113 nt)	b1688	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (96/96); minor base . (2/1); total (98/97)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01

Only 100 of 212 total aligned reads displayed.

ACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTG  >  NC_000913/1767413‑1767592

aCGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCg                                                                                         <  1:6404951/93‑1 (MQ=255)

aCGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCg                                                                                         >  1:2424078/1‑93 (MQ=255)

 cGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCgg                                                                                        <  2:1374238/93‑1 (MQ=255)

 cGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCgg                                                                                        <  2:2399036/93‑1 (MQ=255)

   ttACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGgcggcg                                                                                      <  2:4440168/93‑1 (MQ=255)

    tACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGa                                                                                     >  2:5209943/1‑93 (MQ=255)

     tcccGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGAt                                                                                    <  1:6156444/92‑1 (MQ=255)

     aCCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGAt                                                                                    >  2:4508386/1‑93 (MQ=255)

     aCCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTACGCAGGCTGGCACAACTTGCTGGATAA‑GGGGGGGGCGGCGAt                                                                                    >  1:6469757/1‑93 (MQ=255)

      cccGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGGGGCGATc                                                                                   >  1:5987231/1‑93 (MQ=255)

      cccGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATc                                                                                   >  1:1379996/1‑93 (MQ=255)

      cccGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATc                                                                                   >  1:1079419/1‑93 (MQ=255)

         caTCTGGCGTGGCTTAATACCATTCCGGTGATTTGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGGGCGGCGATCAt                                                                                 <  2:3703343/92‑1 (MQ=255)

          aTCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATgg                                                                               >  2:3460969/1‑93 (MQ=255)

           acTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGc                                                                              <  2:3943580/92‑1 (MQ=255)

            cTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCg                                                                             >  2:2290391/1‑93 (MQ=255)

             tGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGa                                                                            >  2:5421475/1‑93 (MQ=255)

              ggCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATTGCGaa                                                                           >  2:847691/1‑93 (MQ=255)

              ggCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGaa                                                                           >  2:2569804/1‑93 (MQ=255)

               gCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGaaa                                                                          >  1:3545536/1‑93 (MQ=255)

               gCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCCGGGTAT‑GGGGGGGGCGGCGATCATGGCGaaa                                                                          >  1:5246912/1‑93 (MQ=255)

                 gTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGt                                                                        >  1:1576415/1‑93 (MQ=255)

                 gTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGt                                                                        <  1:4990532/93‑1 (MQ=255)

                  tGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTc                                                                       <  2:5622380/93‑1 (MQ=255)

                  tGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTc                                                                       >  2:5344245/1‑93 (MQ=255)

                  tGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTc                                                                       >  2:2141872/1‑93 (MQ=255)

                   ggCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTcc                                                                      <  2:4755824/93‑1 (MQ=255)

                    gCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCg                                                                     >  2:341749/1‑93 (MQ=255)

                     cTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGc                                                                    <  2:3544545/93‑1 (MQ=255)

                     cTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGc                                                                    >  1:322750/1‑93 (MQ=255)

                      ttAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGcc                                                                   <  1:4825138/93‑1 (MQ=255)

                      ttAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGcc                                                                   >  2:3991037/1‑93 (MQ=255)

                      ttAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGcc                                                                   <  2:2457586/93‑1 (MQ=255)

                        aaTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCt                                                                 <  2:1554580/93‑1 (MQ=255)

                        aaTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGAACATGGCGAAAGTCCGCCCt                                                                 >  1:1968153/1‑93 (MQ=255)

                         aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCtt                                                                <  2:4371936/93‑1 (MQ=255)

                         aTACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGCCGGCGATCATGGCGAAAGTCCGCCCtt                                                                >  2:1026424/1‑93 (MQ=255)

                           aCCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTtat                                                              <  2:2481120/93‑1 (MQ=255)

                           aCCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTtat                                                              >  2:4941270/1‑93 (MQ=255)

                           aCCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTtat                                                              <  2:1617094/93‑1 (MQ=255)

                            ccATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTtata                                                             >  1:2541807/1‑93 (MQ=255)

                            ccATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTtata                                                             <  2:4494145/93‑1 (MQ=255)

                             cATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGGGAAAGGCCGCCCTTatat                                                            >  2:5243367/1‑93 (MQ=255)

                               ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAGCTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTg                                                          >  2:4646067/1‑93 (MQ=255)

                               ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTg                                                          <  1:266729/93‑1 (MQ=255)

                               ttCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGGCCGCCCTTATATTg                                                          >  1:5915042/1‑93 (MQ=255)

                                tCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTgg                                                         >  2:5492990/1‑93 (MQ=255)

                                 ccGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGc                                                        >  1:2452567/1‑93 (MQ=255)

                                  cGGTGATTGGCGCGAAGCTGTATGCAGGCTGGGACAACTTGCTGGATAT‑GGGGGGGGAGGCGATGATGGCGGAAGTCCGCCCTTATATTGGcg                                                       >  2:1741427/1‑92 (MQ=255)

                                   ggTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcac                                                      >  1:2769782/1‑93 (MQ=255)

                                   ggTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGG‑CGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcacc                                                     >  1:2580739/1‑93 (MQ=255)

                                     tGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcacca                                                    >  2:2238162/1‑93 (MQ=255)

                                        ttGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcaccacca                                                 <  2:2819860/93‑1 (MQ=255)

                                          ggCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcaccaccacc                                               >  2:5923004/1‑93 (MQ=255)

                                          ggCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcaccaccacc                                               <  2:6230874/93‑1 (MQ=255)

                                          ggCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcaccaccacc                                               >  2:6192375/1‑93 (MQ=255)

                                          ggCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTACGCCCTTATATTGGcaccaccacc                                               >  2:4619617/1‑93 (MQ=255)

                                           gcgcGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcaccaccacca                                              <  1:6139481/93‑1 (MQ=255)

                                           gcgcGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGcaccaccacca                                              >  2:121322/1‑93 (MQ=255)

                                              cgAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTTCGCCCTTATATTGGCACCACCACCACCt                                           >  2:4079955/1‑93 (MQ=255)

                                               gAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTg                                          >  2:2521307/1‑93 (MQ=255)

                                                aaGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTgg                                         >  1:2031734/1‑93 (MQ=255)

                                                 aGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGt                                        >  1:5412880/1‑93 (MQ=255)

                                                 aGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGt                                        <  2:749241/93‑1 (MQ=255)

                                                  gCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGtt                                       >  1:1436386/1‑93 (MQ=255)

                                                  gCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGtt                                       >  2:4151389/1‑93 (MQ=255)

                                                  gCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAATCCGCCCTTATATTCGCACCACCACCACCTGGtt                                       >  1:4539662/1‑93 (MQ=255)

                                                    tGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCg                                     >  2:3170476/1‑93 (MQ=255)

                                                    tGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCg                                     >  1:5511393/1‑93 (MQ=255)

                                                      tATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGtt                                   <  2:3911381/93‑1 (MQ=255)

                                                      tATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGtt                                   <  2:2590151/93‑1 (MQ=255)

                                                      tATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGtt                                   >  2:1927601/1‑93 (MQ=255)

                                                       aTGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTg                                  <  2:6070218/93‑1 (MQ=255)

                                                       aTGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTg                                  <  2:4468843/93‑1 (MQ=255)

                                                        tGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTgg                                 <  1:1013335/93‑1 (MQ=255)

                                                          cAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGc                               <  2:724645/93‑1 (MQ=255)

                                                           aGGCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACATGGTTCGTTGGGCa                              >  1:2047685/1‑93 (MQ=255)

                                                            ggCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAg                             >  1:867620/1‑93 (MQ=255)

                                                            ggCTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGGCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAg                             >  2:4836639/1‑93 (MQ=255)

                                                              cTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATTGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAggc                           <  1:3764553/93‑1 (MQ=255)

                                                              cTGGCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAggc                           <  1:41891/93‑1 (MQ=255)

                                                                ggCACAACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAggcgg                         >  2:5644195/1‑93 (MQ=255)

                                                                  cacaACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGgcggcg                       >  1:4396320/1‑93 (MQ=255)

                                                                    caACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGGCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCa                     >  1:362608/1‑93 (MQ=255)

                                                                    caACTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCa                     <  2:5005347/93‑1 (MQ=255)

                                                                       cTTGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCatat                  <  1:1174405/93‑1 (MQ=255)

                                                                        ttGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                 <  1:6289848/93‑1 (MQ=255)

                                                                        ttGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                 <  1:5793222/93‑1 (MQ=255)

                                                                        ttGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                 <  1:5122910/93‑1 (MQ=255)

                                                                        ttGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                 <  2:1153785/93‑1 (MQ=255)

                                                                        ttGCTGGATAT‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATc                 <  1:3820485/93‑1 (MQ=255)

                                                                               atat‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCt          <  2:1173505/93‑1 (MQ=255)

                                                                                tat‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCtt         >  2:604512/1‑93 (MQ=255)

                                                                                 at‑GGGGGGGGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCttt        >  1:4382131/1‑93 (MQ=255)

                                                                                     ggggggGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATg     <  1:2834149/93‑1 (MQ=255)

                                                                                       ggggGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATgct   <  2:2731113/93‑3 (MQ=255)

                                                                                       ggggGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGt   <  1:5425692/93‑1 (MQ=255)

                                                                                       ggggGCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGt   <  2:3245734/93‑1 (MQ=255)

                                                                                        ggggCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTg  >  1:5754554/1‑93 (MQ=255)

                                                                                        ggggCGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTg  >  2:4039197/1‑93 (MQ=255)

ACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATAT‑GGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTG  >  NC_000913/1767413‑1767592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`