BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,768,131	T→C	V345A (GTG→GCG)	b1688 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,768,131	0	T	C	100.0%	454.5 / NA	136	V345A (GTG→GCG)	b1688	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (61/75); total (61/75)

Only 100 of 149 total aligned reads displayed.

TTATTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCA  >  NC_000913/1768041‑1768220

ttATTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCgtgggcgg                                                                                         >  2:1966890/1‑93 (MQ=255)

 tATTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGga                                                                                        <  2:5921572/93‑1 (MQ=255)

 tATTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGga                                                                                        <  2:3287188/93‑1 (MQ=255)

  aTTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGgaa                                                                                       <  1:5863074/93‑1 (MQ=255)

   ttGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGgaag                                                                                      <  1:4570605/93‑1 (MQ=255)

    tggtggTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGCTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGgaaga                                                                                     >  2:3870565/1‑93 (MQ=255)

     ggtggtTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGgaagaa                                                                                    <  2:2728115/93‑1 (MQ=255)

      gtggtTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGaagaag                                                                                   <  1:6157599/93‑1 (MQ=255)

       tggtTTGATTGTTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGt                                                                                  <  1:3160746/93‑1 (MQ=255)

       tggtTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGCGCGGAAGAAGt                                                                                  >  1:472337/1‑93 (MQ=255)

        ggtTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTc                                                                                 >  2:4370560/1‑93 (MQ=255)

        ggtTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTc                                                                                 >  2:1445043/1‑93 (MQ=255)

        ggtTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTc                                                                                 <  2:1990145/93‑1 (MQ=255)

         gtTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCATGGGCGGAAGAAGTcc                                                                                >  1:221677/1‑93 (MQ=255)

          tttGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTccc                                                                               >  2:5493897/1‑93 (MQ=255)

             gATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCccgcc                                                                            >  2:6244212/1‑93 (MQ=255)

              aTTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCccgccg                                                                           >  1:5832957/1‑93 (MQ=255)

               ttGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCccgccgc                                                                          <  1:804022/93‑1 (MQ=255)

                tGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCccgccgcc                                                                         >  1:159366/1‑93 (MQ=255)

                 gCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCccgccgccg                                                                        >  1:2889868/1‑93 (MQ=255)

                  cTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGa                                                                       <  1:3583225/93‑1 (MQ=255)

                    ttCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACg                                                                     <  2:3167422/93‑1 (MQ=255)

                     tCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACgg                                                                    <  1:3885641/93‑1 (MQ=255)

                      cGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGa                                                                   <  1:153101/93‑1 (MQ=255)

                      cGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGa                                                                   <  2:5193387/93‑1 (MQ=255)

                       gggATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGAc                                                                  <  1:4658341/93‑1 (MQ=255)

                       gggATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGAc                                                                  >  1:1295955/1‑93 (MQ=255)

                        ggATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGAcc                                                                 >  2:5426164/1‑93 (MQ=255)

                         gatgatCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCa                                                                >  2:5760793/1‑93 (MQ=255)

                         gatgatCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCa                                                                >  1:1057590/1‑93 (MQ=255)

                           tgatCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAAc                                                              <  1:3318540/93‑1 (MQ=255)

                           tgatCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAAc                                                              >  1:2349628/1‑93 (MQ=255)

                           tgatCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAAc                                                              >  2:3553320/1‑93 (MQ=255)

                            gatCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAAcc                                                             >  1:4485067/1‑93 (MQ=255)

                             atCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCg                                                            >  2:388566/1‑93 (MQ=255)

                             atCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCg                                                            >  2:2594463/1‑93 (MQ=255)

                               cGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGga                                                          <  1:1216344/93‑1 (MQ=255)

                                ggTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGgaa                                                         >  1:1331294/1‑93 (MQ=255)

                                 gTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGgaag                                                        <  1:1543464/93‑1 (MQ=255)

                                  tCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGgaaga                                                       >  2:3599014/1‑93 (MQ=255)

                                   cTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGgaagaa                                                      >  2:4402520/1‑93 (MQ=255)

                                   cTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGgaagaa                                                      >  1:6017472/1‑93 (MQ=255)

                                    tGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGaaa                                                     >  1:5210394/1‑93 (MQ=255)

                                    tGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGaaa                                                     >  2:4177480/1‑93 (MQ=255)

                                     gTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAAt                                                    <  2:3164566/93‑1 (MQ=255)

                                     gTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAAt                                                    <  1:2753764/93‑1 (MQ=255)

                                     gTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAAt                                                    <  1:3419627/93‑1 (MQ=255)

                                     gTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAAt                                                    >  2:5413852/1‑93 (MQ=255)

                                      tttATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAAtt                                                   <  1:160297/93‑1 (MQ=255)

                                        tATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATtct                                                 <  1:3835378/93‑1 (MQ=255)

                                        tATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATtct                                                 <  1:46791/93‑1 (MQ=255)

                                        tATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATtct                                                 <  2:4587886/93‑1 (MQ=255)

                                           tGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCga                                              >  2:4878154/1‑93 (MQ=255)

                                             gTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCgaag                                            >  1:5625314/1‑93 (MQ=255)

                                              tCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCgaaga                                           <  2:3128283/93‑1 (MQ=255)

                                               ccGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGCAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCgaagaa                                          <  2:6454607/93‑1 (MQ=255)

                                               ccGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCgaagaa                                          >  2:1115039/1‑93 (MQ=255)

                                                  gTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACtt                                       >  2:1233762/1‑93 (MQ=255)

                                                  gTTCTGTTAGCCGTTTCCGGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACtt                                       <  2:4532961/93‑1 (MQ=255)

                                                  gTTCTGTGAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACtt                                       <  2:5854251/93‑1 (MQ=255)

                                                   ttCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGTCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTg                                      >  1:6476159/1‑93 (MQ=255)

                                                   ttCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTg                                      <  2:410635/93‑1 (MQ=255)

                                                   ttCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTg                                      <  2:1622095/93‑1 (MQ=255)

                                                   ttCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTg                                      <  2:6066876/93‑1 (MQ=255)

                                                   ttCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTg                                      <  2:2903066/93‑1 (MQ=255)

                                                    tCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTgg                                     <  2:2226299/93‑1 (MQ=255)

                                                    tCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTgg                                     <  1:2358830/93‑1 (MQ=255)

                                                      tGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCg                                   >  2:2872754/1‑93 (MQ=255)

                                                      tGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCg                                   <  2:5709999/93‑1 (MQ=255)

                                                      tGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCg                                   >  1:585103/1‑93 (MQ=255)

                                                       gTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGa                                  <  1:2404871/93‑1 (MQ=255)

                                                           gCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATc                              >  1:6241888/1‑93 (MQ=255)

                                                             cGTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCga                            <  1:5979496/93‑1 (MQ=255)

                                                              gTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCgag                           >  2:793704/1‑93 (MQ=255)

                                                              gTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCgag                           >  1:227305/1‑93 (MQ=255)

                                                              gTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCgag                           >  1:4090024/1‑93 (MQ=255)

                                                              gTTTCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCgag                           <  1:4359616/93‑1 (MQ=255)

                                                                ttCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGaa                         >  2:5960700/1‑93 (MQ=255)

                                                                 tCCTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGaaa                        <  1:3391658/93‑1 (MQ=255)

                                                                 tCCTGGCGTCGGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGaaa                        <  2:480752/93‑1 (MQ=255)

                                                                  ccTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAAc                       >  1:1109906/1‑93 (MQ=255)

                                                                  ccTGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAAc                       <  1:1817943/93‑1 (MQ=255)

                                                                    tGGCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCg                     <  1:472241/93‑1 (MQ=255)

                                                                     ggCGTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGa                    <  1:4862105/93‑1 (MQ=255)

                                                                      gCGTCTGTTGGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGaa                   <  2:3610117/93‑1 (MQ=255)

                                                                        gTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATa                 >  2:52186/1‑93 (MQ=255)

                                                                        gTCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATa                 >  1:6317576/1‑93 (MQ=255)

                                                                         tCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATaa                <  1:5369257/93‑1 (MQ=255)

                                                                         tCTGTTTGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATaa                <  2:3820402/93‑1 (MQ=255)

                                                                             tttGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTaa            >  1:3638667/1‑93 (MQ=255)

                                                                             tttGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTaa            >  2:1619368/1‑93 (MQ=255)

                                                                               tGCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAAtt          <  1:2410335/93‑1 (MQ=255)

                                                                                gCCGCGTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAAttt         <  1:3006910/93‑1 (MQ=255)

                                                                                 ccGCGTGGAAGGAAAAAGTCCCGCCGCCGACGGACGAACCGGAAGAAATTCTCGAAGAGCTTGGCGAAATCGAGAAACCGAATAAGTAATTtc        <  1:2498281/93‑1 (MQ=255)

                                                                                   gcgTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTtctc      <  1:4596653/93‑1 (MQ=255)

                                                                                   gcgTGGGCGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTtctc      >  1:4750070/1‑93 (MQ=255)

                                                                                      tgggcggAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCtcatc   >  2:1413766/1‑93 (MQ=255)

                                                                                       gggcggAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCtcatca  <  1:4138032/93‑1 (MQ=255)

                                                                                       gggcggAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCtcatca  >  2:2351524/1‑93 (MQ=255)

                                                                                       gggcggAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCtcatca  <  1:1739691/93‑1 (MQ=255)

TTATTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCA  >  NC_000913/1768041‑1768220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`