Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,782,304 A→T D417V (GAT→GTT)  ydiD → putative ligase/synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,782,3040AT99.4% 610.0 / ‑3.6 159D417V (GAT→GTT) ydiDputative ligase/synthetase
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (92/66);  total (92/67)
Fisher's exact test for biased strand distribution p-value = 4.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01

Only 100 of 162 total aligned reads displayed.

CGCGTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGATCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGCCG  >  NC_000913/1782214‑1782394
                                                                                          |                                                                                          
cgcgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtc                                                                                          >  1:2497233/1‑93 (MQ=255)
cgcgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtc                                                                                          <  1:4221795/93‑1 (MQ=255)
cgcgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtc                                                                                          >  1:3314872/1‑93 (MQ=255)
cgcgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtc                                                                                          <  2:168507/93‑1 (MQ=255)
cgcgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtc                                                                                          <  1:1493611/93‑1 (MQ=255)
 gcgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtct                                                                                         >  1:4490728/1‑93 (MQ=255)
  cgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtctc                                                                                        <  2:694725/93‑1 (MQ=255)
  cgTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTtctc                                                                                        >  2:5955258/1‑93 (MQ=255)
   gTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTctct                                                                                       >  2:4705872/1‑93 (MQ=255)
    tGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTg                                                                                      >  1:4600766/1‑93 (MQ=255)
     ggCCGCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGc                                                                                     <  2:3265514/93‑1 (MQ=255)
     ggCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGc                                                                                     >  1:5288965/1‑93 (MQ=255)
      gCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGCAGAAGGCTGGTATTACAGCGGCGTTCTCTGcc                                                                                    >  2:2277485/1‑93 (MQ=255)
      gCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGcc                                                                                    <  2:4927391/93‑1 (MQ=255)
      gCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGcc                                                                                    >  1:1878867/1‑93 (MQ=255)
       ccccAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCg                                                                                   >  2:3502409/1‑93 (MQ=255)
         ccAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTa                                                                                 >  1:2054998/1‑93 (MQ=255)
         ccAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTa                                                                                 >  2:3541720/1‑93 (MQ=255)
         ccAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTa                                                                                 >  2:5345710/1‑93 (MQ=255)
           aaTGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATg                                                                               >  1:400699/1‑93 (MQ=255)
            aTGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATgg                                                                              >  2:4120003/1‑93 (MQ=255)
             tgtgTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGa                                                                             >  2:5461373/1‑93 (MQ=255)
             tgtgTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGa                                                                             <  1:4869636/93‑1 (MQ=255)
              gtgtTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGAt                                                                            <  2:300129/93‑1 (MQ=255)
              gtgtTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGAt                                                                            <  1:1243338/93‑1 (MQ=255)
               tgtTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATg                                                                           <  1:5582286/93‑1 (MQ=255)
                gtTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGa                                                                          >  2:4842292/1‑93 (MQ=255)
                gtTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGa                                                                          <  1:1127709/93‑1 (MQ=255)
                 tttATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAg                                                                         <  1:2912850/93‑1 (MQ=255)
                 tttATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAg                                                                         <  2:1677714/93‑1 (MQ=255)
                   tATGGGGTATTTTGATGAACCTGAATTAGCCGCACGTTCTCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAggc                                                                       <  1:1076450/93‑1 (MQ=255)
                         gTATTTTGATGAACCTGAATTAACCGCCCGTGCCGTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCta                                                                 <  1:5855919/93‑1 (MQ=255)
                          tATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCtat                                                                >  1:5263751/1‑93 (MQ=255)
                           aTTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCtata                                                               >  2:4386451/1‑93 (MQ=255)
                           aTTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCtata                                                               <  1:1162969/93‑1 (MQ=255)
                            ttttGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCtatat                                                              >  2:2961727/1‑93 (MQ=255)
                              ttGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATaa                                                            <  2:3321608/93‑1 (MQ=255)
                                gatgaACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATaaaa                                                          <  1:1632991/93‑1 (MQ=255)
                                  tgaACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAAt                                                        <  1:2765241/93‑1 (MQ=255)
                                  tgaACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAAt                                                        >  2:6270716/1‑93 (MQ=255)
                                     aCCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTAc                                                     >  1:4753262/1‑93 (MQ=255)
                                     aCCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTAc                                                     >  2:2400185/1‑93 (MQ=255)
                                     aCCTGAATTAACCGCCCGTGCACTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTAc                                                     >  1:4090235/1‑93 (MQ=255)
                                      ccTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTAcc                                                    <  2:4745720/93‑1 (MQ=255)
                                      ccTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTAcc                                                    >  2:2483652/1‑93 (MQ=255)
                                        tGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCgg                                                  >  1:3279756/1‑93 (MQ=255)
                                        tGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCgg                                                  >  1:3656305/1‑93 (MQ=255)
                                         gAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGa                                                 >  2:4085352/1‑93 (MQ=255)
                                          aaTTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGAc                                                >  2:1107254/1‑93 (MQ=255)
                                          aaTTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGAc                                                <  2:5557506/93‑1 (MQ=255)
                                          aaTTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGAc                                                >  2:2151775/1‑93 (MQ=255)
                                           aTTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACg                                               <  2:4581103/93‑1 (MQ=255)
                                            ttAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGc                                              >  1:940737/1‑93 (MQ=255)
                                             tAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCa                                             <  1:956296/93‑1 (MQ=255)
                                              aaCCGCCCGTGCCTTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCaa                                            <  1:1630396/93‑1 (MQ=255)
                                               aCCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCaaa                                           >  1:541511/1‑93 (MQ=255)
                                               aCCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCaaa                                           >  1:6085775/1‑93 (MQ=255)
                                               aCCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCaaa                                           >  2:3365647/1‑93 (MQ=255)
                                                ccGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCaaaa                                          <  2:639842/93‑1 (MQ=255)
                                                  gCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCaaaaaa                                        >  2:3832046/1‑93 (MQ=255)
                                                   cccGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAg                                       >  2:1918302/1‑93 (MQ=255)
                                                   cccGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAg                                       <  2:2013840/93‑1 (MQ=255)
                                                     cGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGat                                     <  2:1515665/93‑1 (MQ=255)
                                                       tGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGatat                                   <  1:5397090/93‑1 (MQ=255)
                                                           cTGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATattatt                               >  1:661040/1‑93 (MQ=255)
                                                            tGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTg                              >  1:5780006/1‑93 (MQ=255)
                                                            tGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTg                              >  1:2462808/1‑93 (MQ=255)
                                                            tGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTg                              >  1:5445009/1‑93 (MQ=255)
                                                            tGGATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTg                              >  2:4579425/1‑93 (MQ=255)
                                                             ggATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGt                             >  2:3101120/1‑93 (MQ=255)
                                                             ggATGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGt                             <  1:2737820/93‑1 (MQ=255)
                                                               aTGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTcc                           <  2:4249554/93‑1 (MQ=255)
                                                               aTGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTcc                           <  1:6117076/93‑1 (MQ=255)
                                                                tGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCcg                          >  1:2928524/1‑93 (MQ=255)
                                                                tGAAGAAGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCcg                          >  1:226136/1‑93 (MQ=255)
                                                                 gaagaaGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCcgc                         <  1:2023355/93‑1 (MQ=255)
                                                                 gaagaaGGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCcgc                         >  2:4051474/1‑93 (MQ=255)
                                                                  aagaagGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCcgcg                        <  1:2710786/93‑1 (MQ=255)
                                                                    gaagGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCgcggc                      >  2:5263960/1‑93 (MQ=255)
                                                                    gaagGCTGGTATGACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCgcggc                      >  2:3463564/1‑93 (MQ=255)
                                                                      agGCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCgcggcgg                    >  2:2012543/1‑93 (MQ=255)
                                                                       ggCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCgcggcggc                   >  2:2565211/1‑93 (MQ=255)
                                                                       ggCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCgcggcggc                   >  2:6078102/1‑93 (MQ=255)
                                                                       ggCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCgcggcggc                   >  1:3006194/1‑93 (MQ=255)
                                                                        gCTGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCgcggcggcg                  <  1:4531764/93‑1 (MQ=255)
                                                                          tGGTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGaa                >  1:5479149/1‑93 (MQ=255)
                                                                            gTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGaaaa              <  2:463519/93‑1 (MQ=255)
                                                                            gTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGaaaa              <  2:1127993/93‑1 (MQ=255)
                                                                            gTATTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGaaaa              <  1:1495724/93‑1 (MQ=255)
                                                                              aTTACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAata            <  1:1189812/93‑1 (MQ=255)
                                                                               ttACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAatat           <  2:2575932/93‑1 (MQ=255)
                                                                               ttACAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAatat           <  1:3584301/93‑1 (MQ=255)
                                                                                 aCAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTa         >  1:565389/1‑93 (MQ=255)
                                                                                  cAGCGGCGTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTag        <  2:5385663/93‑1 (MQ=255)
                                                                                      ggcgTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTagcagc    <  2:5259996/93‑1 (MQ=255)
                                                                                       gcgTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGcc   >  2:321971/1‑93 (MQ=255)
                                                                                       gcgTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGcc   <  2:2458394/93‑1 (MQ=255)
                                                                                       gcgTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGcc   >  2:2085481/1‑93 (MQ=255)
                                                                                       gcgTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGcc   >  1:3812274/1‑93 (MQ=255)
                                                                                       gcgTTCTCTGCCGTATGGATGAGGCTGGCTATATAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGCCg  >  2:468649/1‑93 (MQ=255)
                                                                                          |                                                                                          
CGCGTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGATCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGCCG  >  NC_000913/1782214‑1782394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: