Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,852,569 T→C T104A (ACC→GCC)  b1770 ← putative DEOR‑type transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,852,5690TC99.5% 723.3 / NA 207T104A (ACC→GCC) b1770putative DEOR‑type transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (96/109);  total (97/110)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 218 total aligned reads displayed.

ACTGAGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGTACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATG  >  NC_000913/1852479‑1852658
                                                                                          |                                                                                         
actgaGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGcac                                                                                         >  1:2346385/1‑93 (MQ=255)
actgaGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGcac                                                                                         <  2:4669888/93‑1 (MQ=255)
 ctgaGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTGCGGcact                                                                                        <  1:4760035/93‑1 (MQ=255)
 ctgaGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGcact                                                                                        <  2:1363128/93‑1 (MQ=255)
 ctgaGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGcact                                                                                        >  2:4861049/1‑93 (MQ=255)
  tgaGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGcacta                                                                                       >  1:196895/1‑93 (MQ=255)
    aGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCactact                                                                                     >  1:1296319/1‑93 (MQ=255)
     gCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTg                                                                                    >  2:5381295/1‑93 (MQ=255)
     gCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTg                                                                                    <  2:2220913/93‑1 (MQ=255)
     gCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTg                                                                                    >  1:5935547/1‑93 (MQ=255)
      ccAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTgg                                                                                   <  2:4498797/93‑1 (MQ=255)
        aGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGaa                                                                                 <  2:3306473/93‑1 (MQ=255)
        aGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGaa                                                                                 <  1:5272953/93‑1 (MQ=255)
         gAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTAGTGGGAt                                                                                >  2:4904022/1‑93 (MQ=255)
         gAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAAt                                                                                <  2:6454766/93‑1 (MQ=255)
          aaCATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAAtg                                                                               >  2:271888/1‑92 (MQ=255)
           aCATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGTCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCg                                                                              <  2:811174/93‑1 (MQ=255)
             aTGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGc                                                                            <  1:2266370/93‑1 (MQ=255)
             aTGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGc                                                                            >  1:3378445/1‑93 (MQ=255)
             aTGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGc                                                                            <  1:5427617/93‑1 (MQ=255)
              tGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCt                                                                           >  2:2378646/1‑93 (MQ=255)
              tGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCt                                                                           <  1:4887904/93‑1 (MQ=255)
               gAATCTCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTg                                                                          <  2:493459/93‑1 (MQ=255)
                aaTCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGc                                                                         >  1:5051788/1‑93 (MQ=255)
                  tCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCa                                                                       <  1:560047/93‑1 (MQ=255)
                  tCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCa                                                                       <  2:5791552/93‑1 (MQ=255)
                    gCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCAtg                                                                     <  2:1845055/93‑1 (MQ=255)
                      ttCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCAtggt                                                                   <  2:3747805/93‑1 (MQ=255)
                      tgccgccgAGTTGGTTAGCAACGTCAGGCCACTGCGTTCCTGTAACAATTTGAGCAATTCCATTACGGTACTACTGGAATCGGCTGCCAtggt                                                                   <  1:2533123/91‑1 (MQ=255)
                         cgccgAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATggtggt                                                                <  2:5983379/93‑1 (MQ=255)
                         cgccgAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATggtggt                                                                <  1:1516373/93‑1 (MQ=255)
                          gccgAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCAtggtgggt                                                               >  2:5286585/1‑91 (MQ=255)
                          gccgAGTTGGTGAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGtt                                                               <  2:2887816/93‑1 (MQ=255)
                            cgAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGgttt                                                             >  1:3747916/1‑93 (MQ=255)
                             gAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGGGGttttt                                                            >  2:5848578/1‑92 (MQ=255)
                              aGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTAt                                                           <  2:5957989/93‑1 (MQ=255)
                              aGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTAt                                                           >  1:2621434/1‑93 (MQ=255)
                               gTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTAtt                                                          >  1:4500395/1‑93 (MQ=255)
                                  ggTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTc                                                       <  1:877782/93‑1 (MQ=255)
                                  ggTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTc                                                       >  2:2791347/1‑93 (MQ=255)
                                   gTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCg                                                      <  1:1680876/93‑1 (MQ=255)
                                   gTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCg                                                      >  1:2511290/1‑93 (MQ=255)
                                    ttAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGa                                                     <  1:3059370/93‑1 (MQ=255)
                                    ttAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGa                                                     >  2:6369839/1‑93 (MQ=255)
                                      aGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATa                                                   <  2:581244/93‑1 (MQ=255)
                                        cAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATaaa                                                 <  2:5554141/93‑1 (MQ=255)
                                          aCGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAgg                                               >  2:4447041/1‑93 (MQ=255)
                                          aCGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAgg                                               <  2:4828734/93‑1 (MQ=255)
                                          aCGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAgg                                               >  1:6450788/1‑93 (MQ=255)
                                            gTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGt                                             <  2:6255485/93‑1 (MQ=255)
                                            gTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGt                                             >  1:3903300/1‑93 (MQ=255)
                                             tCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTa                                            <  2:3363679/93‑1 (MQ=255)
                                               aGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGt                                          >  1:1589478/1‑93 (MQ=255)
                                                ggCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTg                                         >  1:1410226/1‑93 (MQ=255)
                                                ggCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTg                                         <  1:4715268/93‑1 (MQ=255)
                                                ggCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTg                                         >  2:1741273/1‑93 (MQ=255)
                                                  ccgcTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGcc                                       >  2:414971/4‑93 (MQ=255)
                                                  ccACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTggc                                       >  2:4112353/1‑91 (MQ=255)
                                                  ccACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGcc                                       <  2:3359414/93‑1 (MQ=255)
                                                  ccACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGcc                                       <  2:353757/93‑1 (MQ=255)
                                                   cACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCt                                      <  1:945686/93‑1 (MQ=255)
                                                   cACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCt                                      <  1:2840190/93‑1 (MQ=255)
                                                   cACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCt                                      <  1:4542908/93‑1 (MQ=255)
                                                   cACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCt                                      >  1:3458885/1‑93 (MQ=255)
                                                   cACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACGGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCt                                      <  1:3816269/93‑1 (MQ=255)
                                                    aCTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCtt                                     >  2:5753663/1‑93 (MQ=255)
                                                    aCTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCtt                                     <  1:296434/93‑1 (MQ=255)
                                                    aCTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCtt                                     <  2:1288288/93‑1 (MQ=255)
                                                      tACGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGc                                   >  2:5318145/1‑93 (MQ=255)
                                                       ccGGTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCg                                  <  2:4565658/92‑1 (MQ=255)
                                                          gTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGc                               >  1:4668789/1‑93 (MQ=255)
                                                          gTCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGc                               <  1:4029704/93‑1 (MQ=255)
                                                           tCCTGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCa                              >  2:4383762/1‑93 (MQ=255)
                                                              tGTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATa                           >  1:4208633/1‑93 (MQ=255)
                                                               gTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATaa                          >  1:5400941/1‑93 (MQ=255)
                                                               gTAACAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATaa                          <  1:3256255/93‑1 (MQ=255)
                                                                 aaCAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAgc                        >  2:3632585/1‑93 (MQ=255)
                                                                 aaCAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAgc                        <  2:1619012/93‑1 (MQ=255)
                                                                  aCAATTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAgct                       >  1:4339247/1‑93 (MQ=255)
                                                                     aTTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAgctgct                    <  2:5665322/93‑1 (MQ=255)
                                                                     aTTTGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAgctgct                    <  2:3668489/93‑1 (MQ=255)
                                                                       ttGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTtc                  >  1:2178725/1‑93 (MQ=255)
                                                                       ttGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTtc                  <  1:2923311/93‑1 (MQ=255)
                                                                       ttGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTtc                  <  2:4002315/93‑1 (MQ=255)
                                                                        tGAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTtct                 <  2:4615841/93‑1 (MQ=255)
                                                                         gAGCAATTCCATTGCGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTtctc                <  1:2792787/93‑1 (MQ=255)
                                                                         gAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTtctc                <  1:1151142/93‑1 (MQ=255)
                                                                         gAGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTtctc                >  1:2835090/1‑93 (MQ=255)
                                                                          aGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTctct               <  1:501691/93‑1 (MQ=255)
                                                                          aGCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTctct               >  1:2635046/1‑93 (MQ=255)
                                                                           gCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCtt              >  1:6020213/1‑93 (MQ=255)
                                                                           gCAATTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCtt              <  2:2006604/93‑1 (MQ=255)
                                                                             aaTTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCa            >  1:5817794/1‑93 (MQ=255)
                                                                             aaTTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCa            >  2:3899285/1‑93 (MQ=255)
                                                                              aTTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCAt           >  1:4909707/1‑93 (MQ=255)
                                                                              aTTCCATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCAt           >  2:6128346/1‑93 (MQ=255)
                                                                                 ccATTACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATaaa        >  2:4993519/1‑93 (MQ=255)
                                                                                    ttACGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACg     >  1:5651638/1‑93 (MQ=255)
                                                                                       cGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATg  <  1:3691025/93‑1 (MQ=255)
                                                                                       cGGCACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATg  <  2:2279635/93‑1 (MQ=255)
                                                                                          |                                                                                         
ACTGAGCCAGAACATGAATCGCTTCCGCCGAGTTGGTTAGCAACGTCAGGCCACTACGGTCCTGTAACAATTTGAGCAATTCCATTACGGTACTACTGGAATCGGCTGCCATGGTGGTTTTATTGTCGATAAAGGGTAGTGCCTTGCGTGCAATAAGCTGCTTCTCTTCATAAAACGATG  >  NC_000913/1852479‑1852658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑