BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,973,565	C→T	V239I (GTC→ATC)	motB ←	MotB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,973,565	0	C	T	100.0%	746.1 / NA	191	V239I (GTC→ATC)	motB	MotB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (90/101); total (90/101)

Only 100 of 201 total aligned reads displayed.

CTTGTTTGTTCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGACGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAGTTGC  >  NC_000913/1973475‑1973654

cTTGTTTGTTCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCcgatga                                                                                         >  2:2749398/1‑93 (MQ=255)

cTTGTTTGTTCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCcgatga                                                                                         >  1:3028489/1‑93 (MQ=255)

  tgtttgttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGaca                                                                                       >  2:6059058/1‑93 (MQ=255)

  tgtttgttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGaca                                                                                       <  2:4434787/93‑1 (MQ=255)

   ttttgttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGacac                                                                                      <  2:4282020/92‑1 (MQ=255)

   gtttgttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGacac                                                                                      <  1:2194280/93‑1 (MQ=255)

      tgttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTa                                                                                   >  2:3890148/1‑93 (MQ=255)

      tgttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTa                                                                                   <  1:5604801/93‑1 (MQ=255)

       gttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTaa                                                                                  >  2:2075223/1‑93 (MQ=255)

       gttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTaa                                                                                  <  1:5448616/93‑1 (MQ=255)

        ttCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAac                                                                                 >  2:1291501/1‑93 (MQ=255)

          cAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAacac                                                                               >  2:4968191/1‑93 (MQ=255)

            gTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACtt                                                                             <  1:1066595/93‑1 (MQ=255)

            gTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACtt                                                                             <  2:2520233/93‑1 (MQ=255)

            gTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACtt                                                                             <  1:951560/93‑1 (MQ=255)

             tACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACttt                                                                            >  1:6044390/1‑93 (MQ=255)

              aCCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTg                                                                           <  2:3047887/93‑1 (MQ=255)

                 agcagGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCg                                                                        >  1:5728413/1‑93 (MQ=255)

                 agcagGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCg                                                                        <  1:4412271/93‑1 (MQ=255)

                  gtagGCTGATTTGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTTTCGCCTTGCCGACGACACGTAAAACTTTGTCGc                                                                       >  1:17192/3‑93 (MQ=255)

                  gcagGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGc                                                                       <  1:2447461/93‑1 (MQ=255)

                  gcagGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGc                                                                       >  2:1815315/1‑93 (MQ=255)

                  gcagGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGc                                                                       >  2:6291629/1‑93 (MQ=255)

                  gcagGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGc                                                                       <  1:3669435/93‑1 (MQ=255)

                   cagGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCt                                                                      <  1:3995594/93‑1 (MQ=255)

                    agGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTa                                                                     >  1:3385943/1‑93 (MQ=255)

                    agGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTa                                                                     >  1:3649387/1‑93 (MQ=255)

                    agGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTa                                                                     >  2:3549690/1‑93 (MQ=255)

                     ggCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTAt                                                                    <  2:757078/93‑1 (MQ=255)

                        tGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCa                                                                 >  2:5023360/1‑93 (MQ=255)

                        tGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCa                                                                 >  2:1787447/1‑93 (MQ=255)

                        tGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCa                                                                 >  2:13602/1‑93 (MQ=255)

                            gCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAAccc                                                             <  2:3628895/93‑1 (MQ=255)

                             ggACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCt                                                            <  1:5647570/92‑1 (MQ=255)

                             cGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCt                                                            >  1:1292425/1‑93 (MQ=255)

                              gACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTc                                                           <  2:6367008/93‑1 (MQ=255)

                              gACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTc                                                           <  1:5561751/93‑1 (MQ=255)

                                  gTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGAc                                                       <  1:4036818/93‑1 (MQ=255)

                                  gTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGAc                                                       <  1:2865626/93‑1 (MQ=255)

                                     gACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCAt                                                    >  1:4521424/1‑93 (MQ=255)

                                     gACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCAt                                                    >  1:1931291/1‑93 (MQ=255)

                                      aCGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATc                                                   <  1:515146/93‑1 (MQ=255)

                                       cGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCa                                                  <  1:2823393/93‑1 (MQ=255)

                                       cGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCa                                                  <  1:2304527/93‑1 (MQ=255)

                                       cGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCa                                                  <  1:3812547/93‑1 (MQ=255)

                                        ggCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAg                                                 <  2:4335584/93‑1 (MQ=255)

                                        ggCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAg                                                 <  1:1604773/93‑1 (MQ=255)

                                           atcatcAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTc                                              >  2:5853990/1‑93 (MQ=255)

                                           atcatcAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTc                                              >  1:4894116/1‑93 (MQ=255)

                                           atcatcAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTc                                              <  1:1744945/93‑1 (MQ=255)

                                            tcatcaGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTcg                                             <  2:5508086/93‑1 (MQ=255)

                                             catcaGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTcgc                                            <  2:4409186/93‑1 (MQ=255)

                                               tcaGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCgcgg                                          >  2:6274460/1‑93 (MQ=255)

                                                     ccGCGCTCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGAt                                    <  1:4147237/93‑1 (MQ=255)

                                                     ccGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGAt                                    <  1:148740/93‑1 (MQ=255)

                                                      cgcgATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATg                                   <  1:6031093/93‑1 (MQ=255)

                                                        cgATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCa                                 >  2:2875812/1‑93 (MQ=255)

                                                        cgATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCa                                 <  2:1514938/93‑1 (MQ=255)

                                                        cgATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCa                                 >  2:2164734/1‑93 (MQ=255)

                                                         gATCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCAt                                >  2:4594233/1‑93 (MQ=255)

                                                          aTCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCAtt                               <  2:5442033/93‑1 (MQ=255)

                                                          aTCGCTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCAtt                               <  2:1174651/93‑1 (MQ=255)

                                                              cTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGcc                           <  1:6142947/93‑1 (MQ=255)

                                                              cTTAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGcc                           >  1:1924811/1‑93 (MQ=255)

                                                               ttAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGccc                          >  2:4718672/1‑93 (MQ=255)

                                                               ttAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGccc                          <  2:4875479/93‑1 (MQ=255)

                                                                tAAGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCg                         <  2:3170241/93‑1 (MQ=255)

                                                                 aaGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGa                        <  2:5675372/93‑1 (MQ=255)

                                                                  agggcATCGTTGCCGCCATGCGGATGACACGTACCACTTTGCCGCTATCCAGCCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGAt                       <  2:5146132/90‑1 (MQ=255)

                                                                  aGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGAt                       >  1:1097495/1‑93 (MQ=255)

                                                                  aGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGAt                       >  2:1126700/1‑93 (MQ=255)

                                                                  aGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGAt                       >  1:3601424/1‑93 (MQ=255)

                                                                  aGCGCATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGAt                       <  2:5226846/93‑1 (MQ=255)

                                                                   gcgcATCGTGCCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATc                      <  1:4687701/93‑1 (MQ=255)

                                                                    cgcATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCg                     >  1:85146/1‑93 (MQ=255)

                                                                      cATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGc                   <  2:824097/93‑1 (MQ=255)

                                                                      cATCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGc                   >  1:5936642/1‑93 (MQ=255)

                                                                       aTCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCa                  <  1:4062667/93‑1 (MQ=255)

                                                                       aTCGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCa                  <  1:6392215/93‑1 (MQ=255)

                                                                         cGTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGa                >  2:480580/1‑93 (MQ=255)

                                                                          gTTGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGaa               >  1:4570476/1‑93 (MQ=255)

                                                                           ttGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGaaa              <  2:5618764/93‑1 (MQ=255)

                                                                           ttGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGaaa              <  2:5754190/93‑1 (MQ=255)

                                                                            tGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAg             >  2:3790905/1‑93 (MQ=255)

                                                                            tGCCGCCATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAg             <  2:6205679/93‑1 (MQ=255)

                                                                             gccgccATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGc            >  2:6003084/1‑93 (MQ=255)

                                                                               cgccATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTc          <  2:1921493/93‑1 (MQ=255)

                                                                               cgccATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTc          >  2:578035/1‑93 (MQ=255)

                                                                                gccATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTcc         <  1:1027520/93‑1 (MQ=255)

                                                                                 ccATGCTGATGACACGTAACGCTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTccc        <  1:4819279/93‑1 (MQ=255)

                                                                                 ccATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGCCCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTccc        <  2:1594705/93‑1 (MQ=255)

                                                                                  cATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCa       >  1:1580179/1‑93 (MQ=255)

                                                                                  cATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCa       >  1:3125977/1‑93 (MQ=255)

                                                                                  cATGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCa       >  1:5068038/1‑93 (MQ=255)

                                                                                   aTGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAg      >  2:3384046/1‑93 (MQ=255)

                                                                                    tGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAGt     <  2:2651510/93‑1 (MQ=255)

                                                                                    tGCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAGt     <  1:2649166/93‑1 (MQ=255)

                                                                                     gCCGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAGtt    <  1:1210339/93‑1 (MQ=255)

                                                                                      ccGATGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAGTTg   >  1:47691/1‑93 (MQ=255)

                                                                                       cgatgaCACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAGTTGc  <  1:3545450/93‑1 (MQ=255)

CTTGTTTGTTCAGTACCAGCAGGCTGATGCGACGGTTGACGGCATCATCAGGTCCGCGATCGCTTAAGCGCATCGTTGCCGCCATGCCGACGACACGTAACACTTTGCCGCTATCCAACCCTCCGACCATCAGTTCGCGGCGGGATGCATTGGCCCGATCGGCAGAAAGCTCCCAGTTGC  >  NC_000913/1973475‑1973654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`