BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,973,920	A→G	G120G (GGT→GGC)	motB ←	MotB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,973,920	0	A	G	99.2%	809.7 / ‑4.1	239	G120G (GGT→GGC)	motB	MotB
Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (105/131); total (108/131)
Fisher's exact test for biased strand distribution p-value = 2.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.33e-01

Only 100 of 242 total aligned reads displayed.

AATACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTGGGTGT  >  NC_000913/1973830‑1974011

aaTACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGcc                                                                                           <  2:6275299/93‑1 (MQ=255)

  tACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGcccc                                                                                         >  1:895935/1‑93 (MQ=255)

  tACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGcccc                                                                                         <  2:3161469/93‑1 (MQ=255)

  tACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGcccc                                                                                         <  1:6129161/93‑1 (MQ=255)

  tACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGcccc                                                                                         <  1:6117699/93‑1 (MQ=255)

  tACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGcccc                                                                                         >  2:1721194/1‑93 (MQ=255)

    cGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGc                                                                                       <  1:3488778/93‑1 (MQ=255)

      tAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGGCTCTATCAACTGGTCGAGATCCCCCCGCaa                                                                                     >  2:3334929/1‑93 (MQ=255)

      tAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCaa                                                                                     <  2:1848004/93‑1 (MQ=255)

       aGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAAt                                                                                    <  2:55740/93‑1 (MQ=255)

        gACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAAtt                                                                                   >  1:1600911/1‑93 (MQ=255)

        gACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAAtt                                                                                   >  1:5577638/1‑93 (MQ=255)

        gACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAAtt                                                                                   >  2:2430803/1‑93 (MQ=255)

           cTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTcc                                                                                >  2:3726807/1‑93 (MQ=255)

             tCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGc                                                                              <  2:3910267/93‑1 (MQ=255)

             tCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGc                                                                              >  1:2587948/1‑93 (MQ=255)

               cTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCaa                                                                            <  1:50579/93‑1 (MQ=255)

               cTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCaa                                                                            <  2:71610/93‑1 (MQ=255)

               cTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGACCGCCCCGCAATTTCCGCaa                                                                            <  1:6236146/93‑1 (MQ=255)

                tGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAAt                                                                           <  1:2520685/93‑1 (MQ=255)

                 ggACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATc                                                                          >  1:3307872/1‑93 (MQ=255)

                 ggACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATc                                                                          <  2:1717907/93‑1 (MQ=255)

                  gACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCg                                                                         >  2:5994814/1‑93 (MQ=255)

                   aCCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGa                                                                        >  1:1493485/1‑93 (MQ=255)

                     cAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACt                                                                      <  2:4676505/93‑1 (MQ=255)

                      aGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACtt                                                                     <  1:4524785/93‑1 (MQ=255)

                      aGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACtt                                                                     <  2:1399930/93‑1 (MQ=255)

                       gATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACttt                                                                    <  2:1115216/93‑1 (MQ=255)

                       gATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACttt                                                                    >  2:5462707/1‑93 (MQ=255)

                        aTCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACtttt                                                                   >  1:399868/1‑92 (MQ=255)

                         tCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGc                                                                  >  1:6388535/1‑93 (MQ=255)

                          cGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCt                                                                 <  2:2521311/93‑1 (MQ=255)

                          cGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCt                                                                 <  2:5290155/93‑1 (MQ=255)

                           gATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTc                                                                <  1:3258887/93‑1 (MQ=255)

                           gATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTc                                                                <  1:5977222/93‑1 (MQ=255)

                            aTTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTcc                                                               <  1:4594233/93‑1 (MQ=255)

                            aTTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTcc                                                               >  1:2982762/1‑93 (MQ=255)

                              tttGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCAt                                                             <  1:984053/93‑1 (MQ=255)

                                  agaTGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGt                                                         >  1:2151911/1‑93 (MQ=255)

                                  agaTGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGt                                                         >  2:6311427/1‑93 (MQ=255)

                                   gaTGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGtt                                                        >  2:2673161/1‑93 (MQ=255)

                                   gaTGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGtt                                                        >  2:2383460/1‑93 (MQ=255)

                                    aTGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGttt                                                       <  2:5397930/93‑1 (MQ=255)

                                         gACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCa                                                  <  2:4951643/93‑1 (MQ=255)

                                         gACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCa                                                  <  1:4805078/93‑1 (MQ=255)

                                            gTAACGCCCGCAGTTTCGTATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGct                                               <  2:5202502/93‑1 (MQ=255)

                                            gTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGct                                               <  1:4125184/93‑1 (MQ=255)

                                             tAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGctc                                              >  1:3096961/1‑93 (MQ=255)

                                             tAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGctc                                              <  2:5672320/93‑1 (MQ=255)

                                              aaCGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGctct                                             <  1:3848254/93‑1 (MQ=255)

                                               aCGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCtt                                            <  1:1822090/93‑1 (MQ=255)

                                               aCGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCtt                                            >  2:4806325/1‑93 (MQ=255)

                                                cGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTc                                           <  2:448649/93‑1 (MQ=255)

                                                  cccGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGa                                         <  2:5748509/93‑1 (MQ=255)

                                                  cccGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGa                                         >  2:3527313/1‑93 (MQ=255)

                                                   ccGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGAt                                        >  1:6446644/1‑93 (MQ=255)

                                                   ccGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGAt                                        >  2:6205597/1‑93 (MQ=255)

                                                     gCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGt                                      <  2:2534089/93‑1 (MQ=255)

                                                     gCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGt                                      >  2:735784/1‑93 (MQ=255)

                                                     gCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAACTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGt                                      >  1:2854647/1‑93 (MQ=255)

                                                       aGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTc                                    >  1:3547829/1‑93 (MQ=255)

                                                       aGTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTc                                    <  1:3888292/93‑1 (MQ=255)

                                                        gTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCg                                   <  1:4437820/93‑1 (MQ=255)

                                                        gTTTCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTACGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCg                                   >  1:3432358/1‑93 (MQ=255)

                                                          ttCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGgc                                 <  1:1195129/93‑1 (MQ=255)

                                                          ttCGGATCGGACTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGgc                                 <  1:489029/93‑1 (MQ=255)

                                                           tcggatcggaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGgct                                <  1:6048332/93‑1 (MQ=255)

                                                           tcggatcggaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCAATGCGTTTTTTCAGCTCTTCGATGTTCGgct                                >  2:1984694/1‑93 (MQ=255)

                                                            cggatcggaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGgctg                               <  2:3601424/93‑1 (MQ=255)

                                                            cggatcggaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGgctg                               <  1:2992202/93‑1 (MQ=255)

                                                             ggatcggaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGgctgc                              <  1:4459789/93‑1 (MQ=255)

                                                               atcggaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCGATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCtt                            >  1:2193218/1‑93 (MQ=255)

                                                                tcggaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTACGCAATCGACTTTGCTCCATGCGCTTTTTCAGCTCTTCGATGTTCGGCTGCTTa                           >  1:842755/1‑93 (MQ=255)

                                                                   gaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTc                        <  1:4705858/93‑1 (MQ=255)

                                                                   gaCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTc                        >  1:1591792/1‑93 (MQ=255)

                                                                    aCTCTATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCa                       >  1:5364111/1‑93 (MQ=255)

                                                                     ctctATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCAc                      <  1:2305618/93‑1 (MQ=255)

                                                                     ctctATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCAc                      <  1:5107335/93‑1 (MQ=255)

                                                                       ctATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACtt                    <  2:3322107/93‑1 (MQ=255)

                                                                        tATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTc                   >  1:2057648/1‑93 (MQ=255)

                                                                        tATCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTc                   >  2:6389027/1‑93 (MQ=255)

                                                                         aTCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTcc                  >  2:4858130/1‑93 (MQ=255)

                                                                         aTCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTcc                  >  2:1017505/1‑93 (MQ=255)

                                                                          tCAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTccc                 >  2:394348/1‑93 (MQ=255)

                                                                           cAACTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTcccc                <  1:5350176/93‑1 (MQ=255)

                                                                            aaCTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTccccc               >  1:1744443/1‑93 (MQ=255)

                                                                             aCTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCt              <  1:1095397/93‑1 (MQ=255)

                                                                             aCTGGTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCt              <  2:311184/93‑1 (MQ=255)

                                                                                ggTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGc           <  2:1313633/93‑1 (MQ=255)

                                                                                ggTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGc           >  2:11679/1‑93 (MQ=255)

                                                                                ggTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCCGCTTATTCACTTCCCCCTGGc           <  2:6417485/93‑1 (MQ=255)

                                                                                 gTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCt          >  2:5872928/1‑93 (MQ=255)

                                                                                 gTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCt          <  2:2268371/93‑1 (MQ=255)

                                                                                 gTCGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCt          >  2:4215225/1‑93 (MQ=255)

                                                                                   cGAGATCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCttt        <  1:1980978/93‑1 (MQ=255)

                                                                                    gagaTCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTg       <  1:3684273/93‑1 (MQ=255)

                                                                                    gagaTCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTg       >  1:3798279/1‑93 (MQ=255)

                                                                                    gagaTCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTg       <  1:5233457/93‑1 (MQ=255)

                                                                                     agaTCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTgg      >  2:4276145/1‑93 (MQ=255)

                                                                                       aTCGCCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTGGgt    >  1:6283263/1‑93 (MQ=255)

AATACGTAGACCTTCCTGGACCAGATCGATTTTGAGATGGGGACGTAACGCCCGCAGTTTCGGATCGGACTCTATCAACTGGTCGAGATCACCCCGCAATTTCCGCAATCGACTTTGCTCCATGCGTTTTTTCAGCTCTTCGATGTTCGGCTGCTTATTCACTTCCCCCTGGCTTTGGGTGT  >  NC_000913/1973830‑1974011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`