BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,441,613	T→C	F610F (TTT→TTC)	b2324 →	putative peptidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,441,613	0	T	C	100.0%	860.2 / NA	243	F610F (TTT→TTC)	b2324	putative peptidase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (125/118); total (125/118)

Only 100 of 248 total aligned reads displayed.

TCCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCC  >  NC_000913/2441523‑2441702

tCCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCAt                                                                                         >  2:405443/1‑93 (MQ=255)

tCCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGCTTTTGACGATCTCTTCAt                                                                                         >  1:2231033/1‑93 (MQ=255)

 cccGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATg                                                                                        <  2:560232/93‑1 (MQ=255)

  ccGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGt                                                                                       <  1:1389095/93‑1 (MQ=255)

  ccGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGt                                                                                       <  2:4025414/93‑1 (MQ=255)

   cGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGtt                                                                                      >  1:5758673/1‑93 (MQ=255)

   cGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGtt                                                                                      >  2:2671551/1‑93 (MQ=255)

    gATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGttt                                                                                     <  2:4198713/93‑1 (MQ=255)

    gATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGAAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGttt                                                                                     >  2:3437922/1‑93 (MQ=255)

     aTTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTg                                                                                    >  2:3277211/1‑93 (MQ=255)

     aTTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTg                                                                                    >  1:6222350/1‑93 (MQ=255)

      ttATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGc                                                                                   <  2:5356757/93‑1 (MQ=255)

      ttATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGc                                                                                   >  1:770702/1‑93 (MQ=255)

           aGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCtt                                                                              <  1:5570798/93‑1 (MQ=255)

           aGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCtt                                                                              >  1:4309238/1‑93 (MQ=255)

             gCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTa                                                                            <  1:282974/93‑1 (MQ=255)

             gCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTa                                                                            >  2:2043597/1‑93 (MQ=255)

               aaCACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAgg                                                                          <  1:5095136/93‑1 (MQ=255)

               aaCACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAgg                                                                          >  2:355988/1‑93 (MQ=255)

                acacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGt                                                                         >  2:4367212/1‑93 (MQ=255)

                acacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGt                                                                         <  1:1538748/93‑1 (MQ=255)

                acacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGAAGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGt                                                                         >  1:4655437/1‑93 (MQ=255)

                acacTCGTGGAATATGCGGCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGt                                                                         <  1:4183264/93‑1 (MQ=255)

                 cacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGtt                                                                        >  2:4786217/1‑93 (MQ=255)

                 cacTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGtt                                                                        <  2:517695/93‑1 (MQ=255)

                  acTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtc                                                                       <  2:4952008/93‑1 (MQ=255)

                  acTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtc                                                                       >  2:6376310/1‑93 (MQ=255)

                  acTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtc                                                                       >  2:778911/1‑93 (MQ=255)

                  acTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtc                                                                       <  1:1350498/93‑1 (MQ=255)

                   cTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtct                                                                      >  1:5588167/1‑93 (MQ=255)

                    tCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtctc                                                                     <  1:6161726/93‑1 (MQ=255)

                    gcGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTtctc                                                                     <  2:4813814/92‑1 (MQ=255)

                     cGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTcg                                                                    >  1:1172681/1‑93 (MQ=255)

                       tGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTcgcg                                                                  <  2:6443943/93‑1 (MQ=255)

                         gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                <  2:5462022/93‑1 (MQ=255)

                         gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                >  2:5100856/1‑93 (MQ=255)

                         gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                <  2:531123/93‑1 (MQ=255)

                         gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                >  2:3851655/1‑93 (MQ=255)

                         gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                <  1:4957892/93‑1 (MQ=255)

                         gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                <  2:3773608/93‑1 (MQ=255)

                         gAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGt                                                                <  1:1100118/93‑1 (MQ=255)

                          aagatGCGTCGTTGGCGTAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGtt                                                               <  1:4854652/90‑1 (MQ=255)

                          aaTATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCggct                                                               >  2:59982/1‑91 (MQ=255)

                          aaTATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGtt                                                               <  1:4708806/93‑1 (MQ=255)

                          aaTATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGtt                                                               >  1:1655278/1‑93 (MQ=255)

                           atatGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGttt                                                              >  1:3397664/1‑93 (MQ=255)

                           atatGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGttt                                                              <  2:2862753/93‑1 (MQ=255)

                           atatGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGttt                                                              <  1:5195381/93‑1 (MQ=255)

                            tatGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGCGTTTAGATTCTCGCGGTTtg                                                             >  2:4156799/1‑93 (MQ=255)

                             atGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTtgt                                                            >  2:2591014/1‑93 (MQ=255)

                             atGCGTCGTTGGCGGAGCAGAAAGATGAGGAGGTAAGCGCGCCGGCTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGGTtgt                                                            >  1:3753640/1‑93 (MQ=255)

                              tGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTtgtg                                                           >  1:885124/1‑93 (MQ=255)

                                cgtcgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGtt                                                         >  1:3220177/1‑93 (MQ=255)

                                 gtcgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCTGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTc                                                        <  2:5413367/93‑1 (MQ=255)

                                 gtcgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTc                                                        <  2:141358/93‑1 (MQ=255)

                                 gtcgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTc                                                        >  2:2801450/1‑93 (MQ=255)

                                   cgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTg                                                      <  1:144778/93‑1 (MQ=255)

                                   cgtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGGTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCtc                                                      >  2:5834237/1‑92 (MQ=255)

                                    gtTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGc                                                     >  1:6016231/1‑93 (MQ=255)

                                     ttGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGcc                                                    >  1:1059867/1‑93 (MQ=255)

                                       ggCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGcccc                                                  >  2:164860/1‑93 (MQ=255)

                                       ggCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGcccc                                                  >  1:3497816/1‑93 (MQ=255)

                                       ggCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGcccc                                                  >  2:4988022/1‑93 (MQ=255)

                                          ggAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCt                                               >  2:4634041/1‑93 (MQ=255)

                                           gAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtg                                              >  2:4259941/1‑93 (MQ=255)

                                            accAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgt                                             >  2:6246556/3‑93 (MQ=255)

                                              cAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgtgt                                           <  1:4480923/93‑1 (MQ=255)

                                               aGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCtgtgtg                                          >  1:4806597/1‑93 (MQ=255)

                                                gAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGc                                         >  1:3584650/1‑93 (MQ=255)

                                                gAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGCTTGTGTTCTGCCCCGCTGTGTGc                                         >  2:2313759/1‑93 (MQ=255)

                                                 aaaGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGcc                                        >  2:1227725/1‑93 (MQ=255)

                                                  aaGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCg                                       <  1:6053923/93‑1 (MQ=255)

                                                   aGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATTTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCga                                      >  1:3062183/1‑93 (MQ=255)

                                                    gATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCgag                                     >  1:355925/1‑93 (MQ=255)

                                                    gATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCgag                                     >  1:2401265/1‑93 (MQ=255)

                                                       gAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGAtt                                  <  1:1976241/93‑1 (MQ=255)

                                                         ggCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCt                                >  2:2983414/1‑93 (MQ=255)

                                                          gCGGTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTg                               <  2:303988/93‑1 (MQ=255)

                                                            ggTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTggc                             >  1:4589714/1‑93 (MQ=255)

                                                             gTAAGCGCGCCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTggcg                            >  1:3939745/1‑93 (MQ=255)

                                                                 gcgcgcCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGgcgc                        <  2:2093490/93‑1 (MQ=255)

                                                                     gcCGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGAt                    >  2:1503358/1‑93 (MQ=255)

                                                                      ccGGTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATg                   <  2:1880752/93‑1 (MQ=255)

                                                                       cgtgttttGACGATCTCTTCATGGTTGCGGCTTTAGGTGCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTAGCGGCGCAGATGa                  <  1:3443049/89‑1 (MQ=255)

                                                                        ggTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAg                 <  1:2556087/93‑1 (MQ=255)

                                                                        ggTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAg                 <  2:2173723/93‑1 (MQ=255)

                                                                         gTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGc                <  2:1119446/93‑1 (MQ=255)

                                                                         gTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGc                <  1:4885544/93‑1 (MQ=255)

                                                                         gTTTTTGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGc                <  2:575459/93‑1 (MQ=255)

                                                                          tttttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcg               >  1:578434/1‑93 (MQ=255)

                                                                           ttttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcga              >  1:372326/1‑93 (MQ=255)

                                                                             ttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcgacg            <  2:4305639/93‑1 (MQ=255)

                                                                             ttGACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGcgacg            <  1:5274940/93‑1 (MQ=255)

                                                                               taCGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGaa          <  1:291037/92‑1 (MQ=255)

                                                                               gACGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGaa          >  1:1744742/1‑93 (MQ=255)

                                                                                aCGATCTCTTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAAc         <  1:2352851/93‑1 (MQ=255)

                                                                                     ctctTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGAtt    >  1:858277/1‑93 (MQ=255)

                                                                                      tctTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTc   <  1:2631354/93‑1 (MQ=255)

                                                                                       ctTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTcc  <  1:3624592/93‑1 (MQ=255)

                                                                                       ctTCATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTcc  <  1:376255/93‑1 (MQ=255)

TCCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCC  >  NC_000913/2441523‑2441702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`