Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 253,831 T→C Y44H (TAT→CAT)  prfH → putative peptide chain release factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913253,8310TC99.6% 773.8 / ‑4.7 223Y44H (TAT→CAT) prfHputative peptide chain release factor
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (103/119);  total (104/119)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01

Only 100 of 229 total aligned reads displayed.

CGTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTAT  >  NC_000913/253741‑253920
                                                                                          |                                                                                         
cGTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCAt                                                                                         >  1:1250199/1‑93 (MQ=255)
     ggCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGcc                                                                                    <  2:2048695/93‑1 (MQ=255)
     ggCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGcc                                                                                    <  1:1990265/93‑1 (MQ=255)
     ggCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGcc                                                                                    <  2:3367327/93‑1 (MQ=255)
      gcgcTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCt                                                                                   >  2:2683662/1‑93 (MQ=255)
       ctcTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtc                                                                                  <  1:4620737/91‑1 (MQ=255)
            gTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTcatcat                                                                             <  1:6136997/93‑1 (MQ=255)
            gTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTcatcat                                                                             <  2:6195882/93‑1 (MQ=255)
             tttCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATg                                                                            >  1:5375721/1‑93 (MQ=255)
              ttCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATgg                                                                           <  1:1201278/93‑1 (MQ=255)
              ttCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATgg                                                                           <  2:3044120/93‑1 (MQ=255)
              ttCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATgg                                                                           <  2:3989343/93‑1 (MQ=255)
              ttCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATgg                                                                           <  2:851556/93‑1 (MQ=255)
               tctctcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATggg                                                                          <  2:3867926/93‑1 (MQ=255)
               tctctcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATggg                                                                          >  1:416316/1‑93 (MQ=255)
                ctctcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGgc                                                                         >  2:4232736/1‑93 (MQ=255)
                ctctcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGgc                                                                         <  2:5791751/93‑1 (MQ=255)
                ctctcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGgc                                                                         <  2:1691294/93‑1 (MQ=255)
                ctctcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGgc                                                                         <  2:2666983/93‑1 (MQ=255)
                   tcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCa                                                                      >  1:4442549/1‑93 (MQ=255)
                     gATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCaaa                                                                    >  1:633477/1‑93 (MQ=255)
                      aTGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCaaga                                                                   >  1:1641966/1‑91 (MQ=255)
                      aTGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCaaaa                                                                   >  1:837119/1‑93 (MQ=255)
                       tGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCaaaaa                                                                  >  1:2840501/1‑93 (MQ=255)
                       tGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCaaaaa                                                                  >  1:2278051/1‑93 (MQ=255)
                        ggCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAAc                                                                 <  2:1817033/93‑1 (MQ=255)
                        ggCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAAc                                                                 >  1:3699000/1‑93 (MQ=255)
                           gATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTgg                                                              >  1:3395212/1‑93 (MQ=255)
                              aaCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGttt                                                           <  2:6020091/93‑1 (MQ=255)
                              aaCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGttt                                                           >  1:772429/1‑93 (MQ=255)
                              aaCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGttt                                                           >  2:5916402/1‑93 (MQ=255)
                               aCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTc                                                          >  1:3495225/1‑93 (MQ=255)
                               aCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTc                                                          <  2:6401792/93‑1 (MQ=255)
                               aCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTc                                                          <  1:5843044/93‑1 (MQ=255)
                                 gCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTg                                                        <  1:4285341/93‑1 (MQ=255)
                                  cATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTgg                                                       <  1:4106667/93‑1 (MQ=255)
                                    tGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGc                                                     <  1:1560257/93‑1 (MQ=255)
                                       gCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCAtt                                                  <  2:4125085/93‑1 (MQ=255)
                                         aTTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTgg                                                >  1:2956697/1‑93 (MQ=255)
                                          ttAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTggg                                               <  2:1058421/93‑1 (MQ=255)
                                          ttAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGGCCGCATCGTCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTggg                                               >  2:3499260/1‑93 (MQ=255)
                                           tAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGc                                              <  2:4408286/93‑1 (MQ=255)
                                           tAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGc                                              <  2:4435143/93‑1 (MQ=255)
                                            aaGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCg                                             >  1:5717155/1‑93 (MQ=255)
                                            aaGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCg                                             >  2:5865207/1‑93 (MQ=255)
                                            aaGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCg                                             <  2:1611115/93‑1 (MQ=255)
                                             aGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGt                                            <  1:4913996/93‑1 (MQ=255)
                                              gCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGtt                                           >  2:515744/1‑93 (MQ=255)
                                               cGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGttt                                          <  1:2573940/93‑1 (MQ=255)
                                               cGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGttt                                          <  1:1312272/93‑1 (MQ=255)
                                                gAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGtttt                                         >  1:4055840/1‑93 (MQ=255)
                                                gAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGtttt                                         >  2:1183846/1‑93 (MQ=255)
                                                gAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGtttt                                         <  2:3099875/93‑1 (MQ=255)
                                                  aaGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTAc                                       <  2:4935479/93‑1 (MQ=255)
                                                  aaGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCCGGGCATTGGGCGTTTTAc                                       <  1:4732266/93‑1 (MQ=255)
                                                   aGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTAcc                                      >  2:5675751/1‑93 (MQ=255)
                                                    gCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCg                                     >  2:4700880/1‑93 (MQ=255)
                                                      tGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCt                                   <  1:2618547/93‑1 (MQ=255)
                                                       ggTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtg                                  <  2:5066960/93‑1 (MQ=255)
                                                       ggTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtg                                  >  1:3554613/1‑93 (MQ=255)
                                                       ggTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtg                                  <  2:432123/93‑1 (MQ=255)
                                                       ggTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtg                                  >  1:805567/1‑93 (MQ=255)
                                                       ggTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtg                                  <  1:5322098/93‑1 (MQ=255)
                                                         tgtgGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtgat                                >  1:2498096/1‑93 (MQ=255)
                                                         tgtgGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtgat                                <  2:961803/93‑1 (MQ=255)
                                                          gtgGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtgatg                               <  1:5874740/93‑1 (MQ=255)
                                                           tgGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtgatga                              <  1:3936704/93‑1 (MQ=255)
                                                           tgGCACTATTCAGCGGATTGGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtgatga                              <  2:4783912/93‑1 (MQ=255)
                                                            ggCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAg                             >  1:5250776/1‑93 (MQ=255)
                                                            ggCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAg                             <  1:1662420/93‑1 (MQ=255)
                                                              cACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCa                           >  2:917423/1‑93 (MQ=255)
                                                              cACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCa                           >  2:4085062/1‑93 (MQ=255)
                                                              cACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCa                           <  2:2498770/93‑1 (MQ=255)
                                                                cTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAgg                         >  2:1550078/1‑93 (MQ=255)
                                                                  tttCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                       <  2:1528571/92‑1 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                       >  1:4959445/1‑93 (MQ=255)
                                                                   ttCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAAc                      <  1:2325947/93‑1 (MQ=255)
                                                                      aGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAAt                   <  2:3811466/93‑1 (MQ=255)
                                                                       gTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATc                  <  1:1442023/93‑1 (MQ=255)
                                                                       gTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATc                  <  1:5085726/93‑1 (MQ=255)
                                                                       gTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATc                  >  1:2259084/1‑93 (MQ=255)
                                                                        tGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATTAGCAGGAACAATCg                 <  2:1820106/93‑1 (MQ=255)
                                                                         ggATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCgg                >  1:2699167/1‑93 (MQ=255)
                                                                           aTTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGAt              <  2:760883/93‑1 (MQ=255)
                                                                           aTTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGAt              >  1:3379167/1‑93 (MQ=255)
                                                                           aTTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGAt              <  2:5723565/93‑1 (MQ=255)
                                                                            tttGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATg             >  2:3197999/1‑93 (MQ=255)
                                                                              tGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCa           >  2:1839444/1‑93 (MQ=255)
                                                                               ttCCGAGCCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCaa          <  1:1854872/92‑1 (MQ=255)
                                                                               gTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCaa          >  1:3637692/1‑93 (MQ=255)
                                                                                 ccGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATc        >  2:447806/1‑93 (MQ=255)
                                                                                 ccGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATc        <  1:3514379/93‑1 (MQ=255)
                                                                                   gAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCg      <  2:5486636/93‑1 (MQ=255)
                                                                                    aGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGt     >  2:655226/1‑93 (MQ=255)
                                                                                     gTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGtt    <  1:1031221/93‑1 (MQ=255)
                                                                                       ccGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTAt  <  2:4800841/93‑1 (MQ=255)
                                                                                       ccGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTAt  >  1:2144735/1‑93 (MQ=255)
                                                                                       ccGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTAt  <  2:2911957/93‑1 (MQ=255)
                                                                                       ccGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTAt  <  1:2795652/93‑1 (MQ=255)
                                                                                       ccGCATCGGCCTCATCATGGGCGCAAAAACTGGTGTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTAt  >  2:3972556/1‑93 (MQ=255)
                                                                                          |                                                                                         
CGTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTAT  >  NC_000913/253741‑253920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: