BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,497,463	T→C	V258A (GTG→GCG)	b2380 →	putative sensor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,497,463	0	T	C	100.0%	841.1 / NA	241	V258A (GTG→GCG)	b2380	putative sensor protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/125); total (116/125)

Only 100 of 244 total aligned reads displayed.

TACGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGTGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACA  >  NC_000913/2497373‑2497552

 aCGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCggg                                                                                        <  2:857921/93‑1 (MQ=255)

 aCGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCggg                                                                                        <  1:3144598/93‑1 (MQ=255)

  cGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGt                                                                                       >  1:1572917/1‑93 (MQ=255)

   gCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTg                                                                                      >  1:461624/1‑93 (MQ=255)

   gCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTg                                                                                      <  1:5253795/93‑1 (MQ=255)

   gCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTg                                                                                      >  2:3870709/1‑93 (MQ=255)

    cAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGa                                                                                     >  1:4003167/1‑93 (MQ=255)

      aGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAAc                                                                                   >  1:5116459/1‑93 (MQ=255)

      aGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAAc                                                                                   >  1:5936018/1‑93 (MQ=255)

       ggTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACa                                                                                  <  2:5240154/93‑1 (MQ=255)

       ggTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACa                                                                                  <  2:4667327/93‑1 (MQ=255)

        gTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACAt                                                                                 >  2:1378990/1‑93 (MQ=255)

          cTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATaa                                                                               <  1:108868/93‑1 (MQ=255)

           tGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAAc                                                                              >  1:4825937/1‑93 (MQ=255)

           tGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAAc                                                                              >  1:2337437/1‑93 (MQ=255)

             cGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTa                                                                            <  2:6097366/93‑1 (MQ=255)

               aaaTTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATc                                                                          >  1:4725/1‑93 (MQ=255)

               aaaTTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATc                                                                          >  2:4990996/1‑93 (MQ=255)

               aaaTTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATc                                                                          <  2:5521488/93‑1 (MQ=255)

                 aTTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAg                                                                        <  2:785962/93‑1 (MQ=255)

                        gcgATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCg                                                                 <  1:1358745/93‑1 (MQ=255)

                        gcgATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCg                                                                 <  1:2054772/93‑1 (MQ=255)

                         cgATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGa                                                                <  2:4318534/93‑1 (MQ=255)

                           aTGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATg                                                              >  1:2990363/1‑93 (MQ=255)

                            tGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGa                                                             >  1:331860/1‑93 (MQ=255)

                               cATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACtt                                                          >  1:1993812/1‑93 (MQ=255)

                               cATGCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACtt                                                          <  1:3681770/93‑1 (MQ=255)

                                 ttCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCa                                                        <  1:6310978/93‑1 (MQ=255)

                                 ttCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCa                                                        <  1:5764869/93‑1 (MQ=255)

                                  tCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCAt                                                       >  2:2727335/1‑93 (MQ=255)

                                  tCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCAt                                                       <  1:4196474/93‑1 (MQ=255)

                                   cACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCAtt                                                      <  2:2195692/93‑1 (MQ=255)

                                    aCGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTa                                                     >  1:6257574/1‑93 (MQ=255)

                                     cGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAg                                                    >  2:6315924/1‑93 (MQ=255)

                                      gCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGc                                                   <  1:6049085/93‑1 (MQ=255)

                                      gCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGc                                                   <  2:2339484/93‑1 (MQ=255)

                                       ccGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGcc                                                  <  1:663822/93‑1 (MQ=255)

                                       ccGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGcc                                                  >  1:1431640/1‑93 (MQ=255)

                                       ccGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGcc                                                  <  1:2294351/93‑1 (MQ=255)

                                        cGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGccc                                                 >  1:5611920/1‑93 (MQ=255)

                                         gATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCg                                                >  1:2770354/1‑93 (MQ=255)

                                         gATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCg                                                >  1:844267/1‑93 (MQ=255)

                                          aTGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGa                                               >  2:1449452/1‑93 (MQ=255)

                                          aTGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGa                                               >  2:5162537/1‑93 (MQ=255)

                                           tGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGAc                                              <  2:2969502/93‑1 (MQ=255)

                                              ggTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTAc                                           >  1:71270/1‑93 (MQ=255)

                                               gTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTAcc                                          >  2:5075596/1‑93 (MQ=255)

                                                tagCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTAccc                                         <  2:4255280/91‑1 (MQ=255)

                                                 ggCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCg                                        <  2:6037698/93‑1 (MQ=255)

                                                 ggCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCg                                        >  2:3779457/1‑93 (MQ=255)

                                                  gCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGt                                       <  2:1752857/93‑1 (MQ=255)

                                                   cGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTc                                      <  2:4679590/93‑1 (MQ=255)

                                                   cGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTc                                      >  1:2806604/1‑93 (MQ=255)

                                                    gATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCa                                     <  2:3013284/93‑1 (MQ=255)

                                                    gATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCa                                     >  2:4190875/1‑93 (MQ=255)

                                                    gATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCa                                     <  2:1514474/93‑1 (MQ=255)

                                                    gATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCa                                     >  2:4369163/1‑93 (MQ=255)

                                                        aCTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGTCTTCATTAGCCCGACTACCCGTCAGGCg                                 >  2:3208753/1‑93 (MQ=255)

                                                        aCTAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCg                                 <  1:2260355/93‑1 (MQ=255)

                                                          tAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGAt                               <  2:374478/93‑1 (MQ=255)

                                                          tAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGAt                               >  1:1094024/1‑93 (MQ=255)

                                                          tAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGAt                               <  1:2558976/93‑1 (MQ=255)

                                                          tAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGAt                               <  2:2525784/93‑1 (MQ=255)

                                                          tAATACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGAt                               <  1:1121410/93‑1 (MQ=255)

                                                           aaTACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATg                              <  1:3967031/93‑1 (MQ=255)

                                                           aaTACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATg                              >  1:6155409/1‑93 (MQ=255)

                                                           aaTACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAAATATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATg                              >  1:3439525/1‑93 (MQ=255)

                                                             tACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGaa                            >  1:4588810/1‑93 (MQ=255)

                                                             tACCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGaa                            <  1:3766247/93‑1 (MQ=255)

                                                              aCCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAAt                           <  2:1726338/93‑1 (MQ=255)

                                                              aCCGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAAt                           <  2:696263/93‑1 (MQ=255)

                                                               ccGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAAtt                          >  2:5439454/1‑93 (MQ=255)

                                                               ccGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAAtt                          >  1:5636461/1‑93 (MQ=255)

                                                               ccGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAAtt                          >  2:4620898/1‑93 (MQ=255)

                                                                cGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGTCTTCATTAGCCCGACTACCCGTCAGGCGATGAATTa                         <  2:1633659/93‑1 (MQ=255)

                                                                cGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTa                         <  1:446265/93‑1 (MQ=255)

                                                                cGATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTa                         >  1:4169838/1‑93 (MQ=255)

                                                                 gATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTAc                        >  1:5048947/1‑93 (MQ=255)

                                                                 gATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTAc                        >  1:364386/1‑93 (MQ=255)

                                                                 gATCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTAc                        <  2:1040673/93‑1 (MQ=255)

                                                                   tCATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACgg                      <  1:5319383/93‑1 (MQ=255)

                                                                    cATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGa                     >  2:4816466/1‑93 (MQ=255)

                                                                    cATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGa                     <  2:21050/93‑1 (MQ=255)

                                                                    cATGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGa                     >  2:3567011/1‑93 (MQ=255)

                                                                     aTGTGCTGGCCTATGTTGGCGCGGGTGAACATAACTACCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGaa                    <  1:285150/93‑1 (MQ=255)

                                                                       gtgCTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGaaaa                  <  1:212402/93‑1 (MQ=255)

                                                                       gtgCTGGCCCATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGaaaa                  >  2:3958165/1‑93 (MQ=255)

                                                                          cTGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAatc               <  2:3694421/93‑1 (MQ=255)

                                                                           tGGCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAatca              >  2:3147386/1‑93 (MQ=255)

                                                                            ggCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAatcat             >  1:2355805/1‑93 (MQ=255)

                                                                             gCCTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAatcatc            >  1:1332255/1‑93 (MQ=255)

                                                                               cTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATcatcat          >  2:1549343/1‑93 (MQ=255)

                                                                               cTATGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATcatcat          <  1:3555606/93‑1 (MQ=255)

                                                                                  tGTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTaa       >  2:1154561/1‑93 (MQ=255)

                                                                                   gTTGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTaaa      >  2:5621397/1‑93 (MQ=255)

                                                                                    ttGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTaaaa     <  2:398337/93‑1 (MQ=255)

                                                                                     tGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTaaaaa    <  2:5727993/93‑1 (MQ=255)

                                                                                     tGGCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTaaaaa    <  1:2918514/93‑1 (MQ=255)

                                                                                      ggCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAAc   >  1:5554683/1‑93 (MQ=255)

                                                                                      ggCGCGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAAc   >  1:2601731/1‑93 (MQ=255)

TACGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGTGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACA  >  NC_000913/2497373‑2497552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`