Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,571,889 C→T G146D (GGC→GAC)  b2459 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,571,8890CT99.6% 862.8 / NA 237G146D (GGC→GAC) b2459hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (138/98);  total (138/99)
Fisher's exact test for biased strand distribution p-value = 4.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 274 total aligned reads displayed.

TGAGAAAGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGCCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTGTCGAGA  >  NC_000913/2571799‑2571981
                                                                                          |                                                                                            
 gagaAAGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCaa                                                                                           <  1:5311641/93‑1 (MQ=255)
 gagaAAGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCaa                                                                                           <  1:2220975/93‑1 (MQ=255)
    aaaGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGAc                                                                                        <  2:4969740/93‑1 (MQ=255)
    aaaGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGAc                                                                                        <  2:3056081/93‑1 (MQ=255)
     aaGCCGATTCAGATCGTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGAcg                                                                                       <  1:3392723/93‑1 (MQ=255)
     aaGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGAcg                                                                                       >  2:4513715/1‑93 (MQ=255)
      aGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGAcgc                                                                                      >  1:4735595/1‑93 (MQ=255)
      aGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGAcgc                                                                                      <  1:1988612/93‑1 (MQ=255)
       gCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGAcgcg                                                                                     <  1:5675191/93‑1 (MQ=255)
         cGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGaa                                                                                   <  1:1447740/93‑1 (MQ=255)
         cGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGaa                                                                                   >  2:5786645/1‑93 (MQ=255)
          gATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAAc                                                                                  >  1:407880/1‑93 (MQ=255)
          gATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAAc                                                                                  <  1:274674/93‑1 (MQ=255)
           aTGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACg                                                                                 <  1:2173546/93‑1 (MQ=255)
           aTGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACg                                                                                 <  1:5688807/93‑1 (MQ=255)
           aTGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACg                                                                                 >  1:1947341/1‑93 (MQ=255)
            tGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTCGCAGACCAGCGGTTACCCCAGCGCATAGGCGCGCATAATGTTGTCAAGACGCGAACgg                                                                                >  2:386133/1‑93 (MQ=255)
             gCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGa                                                                               >  2:6218738/1‑93 (MQ=255)
             gCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGa                                                                               <  2:3377007/93‑1 (MQ=255)
             gCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGa                                                                               >  2:801526/1‑93 (MQ=255)
               aGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGatc                                                                             >  1:5881535/1‑92 (MQ=255)
               aGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGata                                                                             <  1:1065828/93‑1 (MQ=255)
                gATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGatat                                                                            >  2:1140982/1‑93 (MQ=255)
                gATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGatat                                                                            <  1:5537951/93‑1 (MQ=255)
                 aTCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATc                                                                           >  2:74451/1‑93 (MQ=255)
                  tCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGatatac                                                                          >  1:3919882/1‑91 (MQ=255)
                  tCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATcc                                                                          >  1:4346263/1‑93 (MQ=255)
                   cTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCg                                                                         >  1:4114541/1‑93 (MQ=255)
                      cGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCgcca                                                                      <  1:928881/93‑1 (MQ=255)
                      cGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTACCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCgcca                                                                      >  2:5490903/1‑93 (MQ=255)
                        tCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTCCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCgccagc                                                                    <  1:4308066/93‑1 (MQ=255)
                          aGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCgccagcca                                                                  >  1:657576/1‑93 (MQ=255)
                          aGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCgccagcca                                                                  >  2:4432203/1‑93 (MQ=255)
                           gAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCAc                                                                 >  2:4791031/1‑93 (MQ=255)
                           gAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCAc                                                                 >  2:6118957/1‑93 (MQ=255)
                              aGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGc                                                              >  1:1590199/1‑93 (MQ=255)
                              aGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGc                                                              <  1:4444335/93‑1 (MQ=255)
                              aGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGc                                                              >  1:3463165/1‑93 (MQ=255)
                              aGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGc                                                              <  2:1322732/93‑1 (MQ=255)
                               gCCCGCCAATCGCCTGGCAGCCCCGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGCCGCGAACGTATATCCGCCAGCCACGGCt                                                             <  2:2100564/93‑1 (MQ=255)
                                 ccGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGc                                                           >  1:4828080/1‑93 (MQ=255)
                                 ccGACAATCGCCGGGCACCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGc                                                           <  1:1338557/93‑1 (MQ=255)
                                   gACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCa                                                         <  2:357622/93‑1 (MQ=255)
                                   gACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCa                                                         >  2:3302533/1‑93 (MQ=255)
                                   gACAATCGCCTGCCAGCCCAGCGGTCCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCa                                                         <  2:2776724/93‑1 (MQ=255)
                                   caCAATCGCCTGGCACCCCAGCGGTTCCCCCAGCGCATCGGCGCCCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCa                                                         <  2:1710330/92‑1 (MQ=255)
                                      aaTCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACgg                                                      >  2:2384622/1‑93 (MQ=255)
                                       aTCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCTCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGt                                                     >  1:2578537/1‑93 (MQ=255)
                                       aTCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGt                                                     <  1:3993741/93‑1 (MQ=255)
                                       aTCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGt                                                     >  1:5153617/1‑93 (MQ=255)
                                       aTCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGt                                                     <  1:352373/93‑1 (MQ=255)
                                       aTCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGt                                                     >  1:359089/1‑93 (MQ=255)
                                              ggCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCa                                              >  2:1450715/1‑93 (MQ=255)
                                                 aGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGtt                                           >  2:666670/1‑93 (MQ=255)
                                                  gCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTc                                          >  2:5938779/1‑93 (MQ=255)
                                                    ccAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCaa                                        >  2:5563230/1‑93 (MQ=255)
                                                    ccAGCGGTCCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCaa                                        <  1:5744381/93‑1 (MQ=255)
                                                     cAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAAt                                       >  1:417129/1‑93 (MQ=255)
                                                      aGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAAtt                                      >  2:4408293/1‑93 (MQ=255)
                                                      aGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAAtt                                      >  1:6241033/1‑93 (MQ=255)
                                                      aGCGGTCCCCCCAGCGCATGGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAAtt                                      <  1:5327769/93‑1 (MQ=255)
                                                       gCGGTGCCCCCAGCGCATCGGCGCGCATAATGTGGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAAttt                                     <  2:1415515/93‑1 (MQ=255)
                                                         ggTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGc                                   >  2:2657710/1‑93 (MQ=255)
                                                         ggTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGc                                   >  1:5233766/1‑93 (MQ=255)
                                                         ggTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGc                                   >  1:1507126/1‑93 (MQ=255)
                                                          gTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCa                                  >  1:3138587/1‑93 (MQ=255)
                                                          gTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCa                                  >  2:5021141/1‑93 (MQ=255)
                                                          gTTCCCCCAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCa                                  >  1:6068700/1‑93 (MQ=255)
                                                           tccccccAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAg                                 <  2:5546599/91‑1 (MQ=255)
                                                              ccccAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCca                              >  2:5390731/1‑93 (MQ=255)
                                                               cccAGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCcac                             >  1:6360269/1‑93 (MQ=255)
                                                               cccAGCGCATCGGCGCGCATAATGTTGTAAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCcac                             <  2:5646060/93‑1 (MQ=255)
                                                                  aGCGCATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACt                          >  2:5975880/1‑93 (MQ=255)
                                                                   gcgcATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTg                         <  2:4696213/93‑1 (MQ=255)
                                                                     gcATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGcc                       >  1:4229977/1‑93 (MQ=255)
                                                                     gcATCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGcc                       <  1:2660580/93‑1 (MQ=255)
                                                                        tCGGCGCGCATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAgc                    >  1:3087125/1‑93 (MQ=255)
                                                                             gcgcATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAAt               >  1:5603316/1‑93 (MQ=255)
                                                                              cgcATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATg              <  1:1701636/93‑1 (MQ=255)
                                                                              cgcATAATGTTGTCAAGACGCGAACGAATACCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATg              <  1:860055/93‑1 (MQ=255)
                                                                               gcATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATgg             >  1:2258512/1‑93 (MQ=255)
                                                                               gcATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATgg             <  2:3484257/93‑1 (MQ=255)
                                                                               gcATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATgg             >  2:2847562/1‑93 (MQ=255)
                                                                               ccATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATgg             <  2:3190270/92‑1 (MQ=255)
                                                                                cATAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGt            >  2:2079572/1‑93 (MQ=255)
                                                                                aaTAATGTGGTCAAGACGCGAACGGATACCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGt            <  2:3174379/92‑1 (MQ=255)
                                                                                 aTAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTg           >  1:1196351/1‑93 (MQ=255)
                                                                                 aTAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTg           >  2:6319870/1‑93 (MQ=255)
                                                                                 aTAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTg           >  2:3233337/1‑93 (MQ=255)
                                                                                 aTAAGGTGGTCAAGACGCAAACGGATACCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTg           <  1:4952001/93‑1 (MQ=255)
                                                                                  tAATGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGc          >  2:3916686/1‑93 (MQ=255)
                                                                                  tAATGTTGCAAAGACGCGAACGGATACCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGc          <  2:5177818/93‑1 (MQ=255)
                                                                                  aaaTGTTGTCAAGCCGCGAACGAATACCCCCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGc          <  2:5231508/92‑1 (MQ=255)
                                                                                   aaTGTTGTCAAGACACGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCt         <  2:1925933/93‑1 (MQ=255)
                                                                                    aTGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTg        >  2:4804701/1‑93 (MQ=255)
                                                                                    aTGTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGGTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTg        >  2:3259356/1‑93 (MQ=255)
                                                                                    aTGTTGCAAAGACGCGAAGGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTg        <  1:229597/93‑1 (MQ=255)
                                                                                     ttttGTCAACACGCAAACGGATACCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTGt       <  1:3851959/91‑1 (MQ=255)
                                                                                     tgttgtCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTGt       >  2:4333562/1‑93 (MQ=255)
                                                                                      gTTGTCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTGTc      <  1:24949/93‑1 (MQ=255)
                                                                                          |                                                                                            
TGAGAAAGCCGATGCAGATCTTCGTCAGAAAGCCCGACAATCGCCTGGCAGCCCAGCGGTTCCCCCAGCGCATCGGCGCGCATAATGTTGCCAAGACGCGAACGGATATCCGCCAGCCACGGCTGCCACGGTTCCGCCAGTTCAATTTGCAGCCACACTGCCAGCGCAATGGTGCTGTCGAGA  >  NC_000913/2571799‑2571981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: