BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	269,425	A→G	intergenic (‑19/‑41)	perR ← / → yi91a	putative transcriptional regulator LYSR‑type/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	269,425	0	A	G	100.0%	765.1 / NA	215	intergenic (‑19/‑41)	perR/yi91a	putative transcriptional regulator LYSR‑type/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (100/115); total (100/115)

Only 100 of 222 total aligned reads displayed.

AAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAA  >  NC_000913/269335‑269514

   aGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGAt                                                                                      <  1:2771385/93‑1 (MQ=255)

   aGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGAt                                                                                      <  1:4332814/93‑1 (MQ=255)

     cTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGa                                                                                    <  2:5320875/93‑1 (MQ=255)

     cTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGa                                                                                    <  1:3906011/93‑1 (MQ=255)

     cTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGa                                                                                    <  2:3723093/93‑1 (MQ=255)

     cTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACGGGGGATGa                                                                                    <  1:6265122/93‑1 (MQ=255)

      tCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGaa                                                                                   <  2:1276908/93‑1 (MQ=255)

      tCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGaa                                                                                   >  1:4172140/1‑93 (MQ=255)

       ccGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAg                                                                                  <  1:3668142/93‑1 (MQ=255)

        cGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGt                                                                                 <  2:4447148/93‑1 (MQ=255)

         ggTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTg                                                                                <  1:6032343/93‑1 (MQ=255)

         ggTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTg                                                                                <  1:4985772/93‑1 (MQ=255)

          gTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTgg                                                                               <  2:3141172/93‑1 (MQ=255)

           tACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGt                                                                              <  2:1436526/93‑1 (MQ=255)

            aCGCCCAGCCACTTCAAAGGCGCGTAACACATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGtt                                                                             <  1:1265022/93‑1 (MQ=255)

            aCGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTACGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGtt                                                                             <  2:3440812/93‑1 (MQ=255)

            aCGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGtt                                                                             <  1:2368222/93‑1 (MQ=255)

            aCGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGtt                                                                             <  2:5137454/93‑1 (MQ=255)

               aCCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTAc                                                                          >  1:5768701/1‑93 (MQ=255)

                ccAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGGTGTAGTGGTTTACt                                                                         >  1:1785965/1‑93 (MQ=255)

                ccAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACt                                                                         <  2:507796/93‑1 (MQ=255)

                ccAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACt                                                                         <  2:3510360/93‑1 (MQ=255)

                 cAGACGCTTCAAAGGCGCGTAACAGATTTAGAGGCGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTCACTg                                                                        >  1:2705421/1‑93 (MQ=255)

                  aGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGa                                                                       >  2:4793846/1‑93 (MQ=255)

                  aGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGCGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGa                                                                       >  2:4499588/1‑93 (MQ=255)

                   gCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGaa                                                                      <  1:4194330/93‑1 (MQ=255)

                    ccGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAt                                                                     <  1:1065983/93‑1 (MQ=255)

                    ccGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAt                                                                     <  1:1986671/93‑1 (MQ=255)

                    ccGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAt                                                                     <  1:2107512/93‑1 (MQ=255)

                    ccGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAt                                                                     >  1:1964536/1‑93 (MQ=255)

                      gCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAttt                                                                   <  2:5222882/93‑1 (MQ=255)

                      gCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAttt                                                                   >  2:3027840/1‑93 (MQ=255)

                      gCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAAttt                                                                   <  1:952844/93‑1 (MQ=255)

                       cTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTg                                                                  <  2:4424941/93‑1 (MQ=255)

                        ttCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTgg                                                                 <  1:5551703/93‑1 (MQ=255)

                          cAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGcc                                                               >  1:5205662/1‑93 (MQ=255)

                           aaaGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCa                                                              >  1:3335815/1‑93 (MQ=255)

                            aaGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCAc                                                             <  1:3511231/93‑1 (MQ=255)

                            aaGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCAc                                                             >  1:5475716/1‑93 (MQ=255)

                             aGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCAcc                                                            <  1:2659841/93‑1 (MQ=255)

                             aGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCAcc                                                            <  1:3150943/93‑1 (MQ=255)

                             aGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCAcc                                                            <  2:606870/93‑1 (MQ=255)

                             aGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCAcc                                                            >  2:1325872/1‑93 (MQ=255)

                              ggCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCt                                                           <  1:6462238/93‑1 (MQ=255)

                                cgcgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGa                                                         <  2:2326160/93‑1 (MQ=255)

                                cgcgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGa                                                         <  1:4633933/93‑1 (MQ=255)

                                 gcgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGaa                                                        >  1:5178803/1‑93 (MQ=255)

                                 gcgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGaa                                                        >  2:2233728/1‑93 (MQ=255)

                                  cgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAAc                                                       <  2:1974432/93‑1 (MQ=255)

                                  cgTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAAc                                                       <  1:1335787/93‑1 (MQ=255)

                                   gTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACa                                                      <  2:1012053/93‑1 (MQ=255)

                                   gTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACa                                                      <  2:4274260/93‑1 (MQ=255)

                                      aCAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACagag                                                   >  2:5707683/1‑93 (MQ=255)

                                       cAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAgg                                                  <  1:1094557/93‑1 (MQ=255)

                                        aGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGt                                                 <  1:5324251/93‑1 (MQ=255)

                                        aGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGt                                                 <  1:1003990/93‑1 (MQ=255)

                                         gATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTg                                                >  2:5428788/1‑93 (MQ=255)

                                          aTTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGa                                               <  2:4693087/93‑1 (MQ=255)

                                          aTTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGa                                               <  1:4749450/93‑1 (MQ=255)

                                            ttAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGata                                             <  2:1699029/93‑1 (MQ=255)

                                              agagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATg                                           >  2:4903462/1‑93 (MQ=255)

                                               gagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGc                                          >  1:1680415/1‑93 (MQ=255)

                                               gagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGc                                          >  1:4015354/1‑93 (MQ=255)

                                               gagGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGc                                          >  1:5889285/1‑93 (MQ=255)

                                                   tGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCAc                                      >  1:5393381/1‑93 (MQ=255)

                                                     cTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCt                                    <  2:1547508/93‑1 (MQ=255)

                                                     cTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCt                                    <  1:3851532/93‑1 (MQ=255)

                                                     cTTATGCTCAGAGTGTCATTCATGAATCTTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTAAACAGAGCTGATATGCTCACCt                                    <  1:1881537/93‑1 (MQ=21)

                                                      ttttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTc                                   >  2:2077234/1‑93 (MQ=255)

                                                      ttttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTc                                   <  1:3784909/93‑1 (MQ=255)

                                                      ttttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTc                                   >  1:1862270/1‑93 (MQ=255)

                                                      ttttGCTAAGAGCCTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTc                                   <  2:6435571/93‑1 (MQ=255)

                                                       tttGCTAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCa                                  >  1:6314193/1‑93 (MQ=255)

                                                            tAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaaca                             >  1:4790872/1‑93 (MQ=255)

                                                            tAAGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaaca                             >  2:5197812/1‑93 (MQ=255)

                                                             aaGAGCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaa                            >  2:355787/1‑93 (MQ=255)

                                                              agagCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaac                           >  2:5616744/1‑93 (MQ=255)

                                                              agagCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaac                           >  2:2684902/1‑93 (MQ=255)

                                                               gagCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAacaaca                          >  1:2933948/1‑93 (MQ=255)

                                                                agCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGATTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAacac                         >  1:527452/1‑93 (MQ=255)

                                                                 gCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCGCCTCAGAACAAcaca                        <  1:5977376/93‑1 (MQ=255)

                                                                 gCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAAcaca                        <  1:4877113/93‑1 (MQ=255)

                                                                 gCTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAAcaca                        >  2:1234823/1‑93 (MQ=255)

                                                                  cTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAg                       >  2:760137/1‑93 (MQ=255)

                                                                  cTTCATTCATGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAg                       <  2:5969011/93‑1 (MQ=255)

                                                                    tcattcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgt                     <  2:2876885/93‑1 (MQ=255)

                                                                      attcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGgtgt                   >  2:5802803/1‑93 (MQ=255)

                                                                       ttcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTc                  >  1:1543435/1‑93 (MQ=255)

                                                                        tcatGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCa                 >  1:614095/1‑93 (MQ=255)

                                                                         catGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCAt                >  1:657025/1‑93 (MQ=255)

                                                                         catGAATCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCAt                >  2:5960852/1‑93 (MQ=255)

                                                                            gAATCCCTTTCACTGGGGATGAAGTGGTTTACTGCATTTGGACACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGACATAAt             >  1:4982418/1‑93 (MQ=18)

                                                                              aTCCTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACATGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGa           <  1:6374597/93‑1 (MQ=255)

                                                                                ccTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaa         >  2:1597462/1‑93 (MQ=255)

                                                                                ccTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaa         >  1:3412297/1‑93 (MQ=255)

                                                                                ccTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaa         <  1:3261429/93‑1 (MQ=255)

                                                                                 cTTTTCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaa        >  1:4125351/1‑93 (MQ=255)

                                                                                  ttttCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaaa       >  2:6079329/1‑93 (MQ=255)

                                                                                  ttttCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGaaaaa       <  1:2207186/93‑1 (MQ=255)

                                                                                    ttCACTGGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCCCCTCAGAACAACACAGGTGTCATAATGaaaaaaa     <  2:4001141/93‑1 (MQ=255)

AAAAGCTCCGGTACGACCAGCCGCTTCAAAGGCGCGTAACAGATTTAGAGGTGCTTTTGCTAAGAGCTTCATTCATGAATCCTTTTCACTAGGGATGAAGTGGTTTACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGTCATAATGAAAAAAAGAA  >  NC_000913/269335‑269514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`