BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,923,951	T→C	H194H (CAT→CAC)	yqcD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,923,951	0	T	C	99.6%	833.2 / NA	238	H194H (CAT→CAC)	yqcD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (130/107); total (131/107)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 249 total aligned reads displayed.

GACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCA  >  NC_000913/2923862‑2924040

gACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCaa                                                                                        >  1:1681709/1‑93 (MQ=255)

 aCTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAAc                                                                                       <  1:6345473/93‑1 (MQ=255)

 aCTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAAc                                                                                       <  2:2845171/93‑1 (MQ=255)

   tATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCACCCa                                                                                     >  2:919714/1‑93 (MQ=255)

    aTCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAg                                                                                    >  1:2845560/1‑93 (MQ=255)

    aTCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAg                                                                                    >  1:253880/1‑93 (MQ=255)

     tCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGa                                                                                   <  2:2702951/93‑1 (MQ=255)

        ggAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTg                                                                                >  1:73273/1‑93 (MQ=255)

        ggAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTg                                                                                <  1:1141276/93‑1 (MQ=255)

          agaATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTggg                                                                              <  2:5815214/93‑1 (MQ=255)

          agaATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTggg                                                                              >  2:707805/1‑93 (MQ=255)

           gaATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCCGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTgggg                                                                             >  2:2934659/1‑93 (MQ=255)

           gaATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTgggg                                                                             >  2:3823921/1‑93 (MQ=255)

           gaATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTgggg                                                                             >  2:5265206/1‑93 (MQ=255)

            aaTGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGt                                                                            <  2:3427692/93‑1 (MQ=255)

            aaTGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGt                                                                            <  1:5024995/93‑1 (MQ=255)

            aaTGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGt                                                                            <  1:4796887/93‑1 (MQ=255)

                 cACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCt                                                                       >  1:4139791/1‑93 (MQ=255)

                  aCCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTc                                                                      <  2:3979813/93‑1 (MQ=255)

                  aCCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTc                                                                      >  2:5108531/1‑93 (MQ=255)

                    cTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCa                                                                    >  1:3924643/1‑93 (MQ=255)

                     tgtgGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCaa                                                                   >  2:5886343/1‑93 (MQ=255)

                      gtggtgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCaaa                                                                  <  1:5781357/93‑1 (MQ=255)

                       tggtgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAAt                                                                 <  1:4438135/93‑1 (MQ=255)

                       tggtgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAAt                                                                 <  1:5231304/93‑1 (MQ=255)

                       tggtgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAAt                                                                 >  2:266262/1‑93 (MQ=255)

                        ggtgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAAtt                                                                >  1:3245407/1‑93 (MQ=255)

                        ggtgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAAtt                                                                <  1:4544169/93‑1 (MQ=255)

                         gtgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTc                                                               >  2:5563665/1‑93 (MQ=255)

                          tgAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCa                                                              <  2:5497027/93‑1 (MQ=255)

                             aaaaGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTa                                                           <  2:3367/93‑1 (MQ=255)

                              aaaGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCCCCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTAt                                                          <  1:4558817/93‑1 (MQ=255)

                              aaaGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTAt                                                          <  1:1216754/93‑1 (MQ=255)

                              aaaGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTAt                                                          >  2:2034765/1‑93 (MQ=255)

                               aaGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATc                                                         >  1:3210473/1‑93 (MQ=255)

                                agtagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCg                                                        >  1:2303719/1‑93 (MQ=255)

                                agtagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCg                                                        <  1:4023144/93‑1 (MQ=255)

                                agtagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCg                                                        <  1:600288/93‑1 (MQ=255)

                                 gtagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGt                                                       <  1:5827371/93‑1 (MQ=255)

                                 gtagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGt                                                       >  1:1178423/1‑93 (MQ=255)

                                 gtagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGt                                                       <  1:3087258/93‑1 (MQ=255)

                                 gtagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGt                                                       >  1:3948794/1‑93 (MQ=255)

                                  tagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTg                                                      <  2:4230175/93‑1 (MQ=255)

                                  tagtGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTg                                                      <  1:5523696/93‑1 (MQ=255)

                                     tGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGAc                                                   <  1:4000464/93‑1 (MQ=255)

                                       gAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGc                                                 <  2:4517457/93‑1 (MQ=255)

                                        aaGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGcc                                                <  1:6150374/93‑1 (MQ=255)

                                         agagACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCa                                               >  2:6135236/1‑93 (MQ=255)

                                          gagaCGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCaa                                              >  2:2735008/1‑93 (MQ=255)

                                          gagaCGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCaa                                              >  1:1633103/1‑93 (MQ=255)

                                           agaCGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCaaa                                             >  2:4929691/1‑93 (MQ=255)

                                            gaCGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAAt                                            >  1:1412199/1‑93 (MQ=255)

                                            gaCGCTTGACAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAAt                                            >  1:6279984/1‑93 (MQ=255)

                                             aCGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAAtt                                           >  1:17680/1‑93 (MQ=255)

                                             aCGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAAtt                                           <  2:2336762/93‑1 (MQ=255)

                                              cGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTg                                          >  2:5978931/1‑93 (MQ=255)

                                              cGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTg                                          <  2:1794399/93‑1 (MQ=255)

                                                cTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGAc                                        >  1:5054777/1‑93 (MQ=255)

                                                   gTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACaga                                     <  1:8227/93‑1 (MQ=255)

                                                   gTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACaga                                     <  2:873010/93‑1 (MQ=255)

                                                      aGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGaa                                  >  1:1050297/1‑93 (MQ=255)

                                                      aGCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGaa                                  >  1:5474042/1‑93 (MQ=255)

                                                       gCCACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGaaa                                 <  2:3785095/93‑1 (MQ=255)

                                                        ccACCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGaaaa                                <  2:46880/93‑1 (MQ=255)

                                                          aCCTGCTGAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAAc                              <  1:2691556/93‑1 (MQ=255)

                                                             tgctgAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAActgc                           >  2:3988768/1‑93 (MQ=255)

                                                              gctgAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAActgct                          <  2:2429081/93‑1 (MQ=255)

                                                              gctgAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAActgct                          <  2:5757072/93‑1 (MQ=255)

                                                              gctgAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAActgct                          <  2:4861636/93‑1 (MQ=255)

                                                              gctgAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAActgct                          >  1:1843221/1‑93 (MQ=255)

                                                                tgAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACtgctgc                        <  2:6381036/93‑1 (MQ=255)

                                                                tgAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACtgctgc                        >  2:4995643/1‑93 (MQ=255)

                                                                 gAAATCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCg                       >  1:4244485/1‑93 (MQ=255)

                                                                  aaaTCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGt                      <  1:3397960/93‑1 (MQ=255)

                                                                   aaTCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGtt                     >  1:5963753/1‑93 (MQ=255)

                                                                    aTCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTa                    >  1:2390552/1‑93 (MQ=255)

                                                                    aTCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTa                    <  1:3686798/93‑1 (MQ=255)

                                                                     tCAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTAc                   >  2:1358979/1‑93 (MQ=255)

                                                                      cAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTAcc                  >  2:3199772/1‑93 (MQ=255)

                                                                      cAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTAcc                  <  2:1436629/93‑1 (MQ=255)

                                                                      cAAACTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTAcc                  >  2:1149003/1‑93 (MQ=255)

                                                                       aaaCTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCt                 >  2:2569015/1‑93 (MQ=255)

                                                                        aaCTGCCTGCTCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTg                <  1:5157242/93‑1 (MQ=255)

                                                                        aaCTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTg                <  1:3447782/93‑1 (MQ=255)

                                                                         aCTGCCTTATCACCCACCAACCAGATTGGGGTTCTCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTgg               <  2:1614615/93‑1 (MQ=255)

                                                                          cTGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGt              >  1:2205017/1‑93 (MQ=255)

                                                                           tGCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGtc             <  1:2820091/93‑1 (MQ=255)

                                                                            gCCTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGtct            >  1:2581070/1‑93 (MQ=255)

                                                                              cTGATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCa          >  1:3621225/1‑93 (MQ=255)

                                                                                gATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCAtt        >  2:4274604/1‑93 (MQ=255)

                                                                                gATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCAtt        <  1:1976834/93‑1 (MQ=255)

                                                                                gATCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCAtt        >  2:6250404/1‑93 (MQ=255)

                                                                                 aTCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTGATTc       >  2:3176385/1‑93 (MQ=255)

                                                                                 aTCACCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTc       >  2:5378054/1‑93 (MQ=255)

                                                                                 aTCACCCACCAACCAGATGGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTc       <  1:1282955/93‑1 (MQ=255)

                                                                                    aCCCACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGt    <  1:946497/93‑1 (MQ=255)

                                                                                     cccACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGtc   >  1:4359842/1‑93 (MQ=255)

                                                                                     cccACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGtc   >  1:4881774/1‑93 (MQ=255)

                                                                                     cccACCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGtc   >  2:1970053/1‑93 (MQ=255)

                                                                                      ccaccaACCGGATTGGTGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGCCAGAGAAAAACTGCTGCGTTACCTCGCCTCATTCCGtcc  >  1:1036618/1‑92 (MQ=255)

GACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCA  >  NC_000913/2923862‑2924040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`