BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,929,074	A→G	intergenic (+109/‑3)	sdaB → / → b2798	L‑serine dehydratase/Exo

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,929,074	0	A	G	99.3%	946.4 / ‑4.6	278	intergenic (+109/‑3)	sdaB/b2798	L‑serine dehydratase/Exo
Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (124/152); total (125/153)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 285 total aligned reads displayed.

GTTTTGCGAGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTATCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAACCTGC  >  NC_000913/2928984‑2929163

ttttgGCGGGCCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTc                                                                                         <  2:1165957/92‑1 (MQ=255)

gTTTTGCGAGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTc                                                                                         >  2:341923/1‑93 (MQ=255)

gTTTTGCGAGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTc                                                                                         <  2:385143/93‑1 (MQ=255)

 ttttGCGAGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCg                                                                                        >  2:5974479/1‑93 (MQ=255)

  tttGCGAGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGt                                                                                       <  1:4007243/93‑1 (MQ=255)

   tagCGAGGCATCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTg                                                                                      <  1:2916305/91‑1 (MQ=255)

       gAGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTg                                                                                  >  2:2363752/1‑93 (MQ=255)

        agcccTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGt                                                                                 <  1:1304761/90‑1 (MQ=255)

        aGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGt                                                                                 >  2:6260312/1‑93 (MQ=255)

        aGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGt                                                                                 >  1:2548535/1‑93 (MQ=255)

         ggCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGtt                                                                                <  2:3565872/93‑1 (MQ=255)

         gcccTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGtt                                                                                <  2:2915234/91‑1 (MQ=255)

         agCCTCTTCCCGATTTCCCATCCAACCGTAAGCCT‑TTCCGGCTACCAATGGTACCCTTAACGGCTGATCTTTAAGGGGGTTGTCGTGGCTGtt                                                                                <  2:916295/92‑1 (MQ=255)

          gCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTc                                                                               <  1:3384542/93‑1 (MQ=255)

              ctTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCAttt                                                                           <  2:3481273/93‑1 (MQ=255)

              ctTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCAttt                                                                           <  1:4420090/93‑1 (MQ=255)

              ctTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCAttt                                                                           >  2:502726/1‑93 (MQ=255)

              ctTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCAttt                                                                           <  2:4417869/93‑1 (MQ=255)

              ctTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCAttt                                                                           <  2:4299541/93‑1 (MQ=255)

              ctTCCCGATTGCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCAttt                                                                           <  2:2432096/93‑1 (MQ=255)

               ttCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTg                                                                          >  1:3550854/1‑93 (MQ=255)

                 cccGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCt                                                                        <  1:3772047/93‑1 (MQ=255)

                 cccGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCt                                                                        <  1:2251873/93‑1 (MQ=255)

                  ccGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCtt                                                                       >  1:5062246/1‑93 (MQ=255)

                  ccGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCtt                                                                       >  1:4871018/1‑93 (MQ=255)

                   cGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTa                                                                      <  2:6189409/93‑1 (MQ=255)

                     aTTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTAtt                                                                    <  2:5801930/93‑1 (MQ=255)

                     aTTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTAtt                                                                    <  1:1056898/93‑1 (MQ=255)

                     aTTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTAtt                                                                    <  1:6218224/93‑1 (MQ=255)

                     aTTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTAtt                                                                    <  2:1499056/93‑1 (MQ=255)

                        tctcATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTc                                                                 <  1:3072686/93‑1 (MQ=255)

                        tctcATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTc                                                                 >  2:4613732/1‑93 (MQ=255)

                         ctcATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGGCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCg                                                                <  2:212269/93‑1 (MQ=255)

                          tcATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGa                                                               >  2:3931230/1‑93 (MQ=255)

                           cATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGAt                                                              <  2:2664628/93‑1 (MQ=255)

                            aTCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTTGATg                                                             >  1:1146930/1‑93 (MQ=255)

                              ccAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCa                                                           >  2:5918382/1‑93 (MQ=255)

                               cAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCAc                                                          >  1:1447412/1‑93 (MQ=255)

                                aGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTATCGTGGCTGTTCATTTGCTTATTGTCGATGCACt                                                         >  1:943495/1‑93 (MQ=255)

                                 gCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTTGATGCACTg                                                        >  1:3579885/1‑93 (MQ=255)

                                  ccGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGa                                                       <  1:18541/93‑1 (MQ=255)

                                    gT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAAt                                                     <  1:3136397/93‑1 (MQ=255)

                                       aGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCt                                                   <  1:3859866/93‑1 (MQ=255)

                                       aGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCt                                                   >  2:1087427/1‑93 (MQ=255)

                                        gCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCtt                                                  >  2:4486693/1‑93 (MQ=255)

                                        gCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCtt                                                  <  2:740230/93‑1 (MQ=255)

                                        gCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGGTGTCGTGGCTGTTCATTTGCTTATTGTCTATGCACTGAATCtt                                                  >  1:5465496/1‑93 (MQ=255)

                                          cTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTAt                                                >  2:3314887/1‑93 (MQ=255)

                                           tGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTAtt                                               <  1:2027472/93‑1 (MQ=255)

                                            gTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATtc                                              <  2:6061633/93‑1 (MQ=255)

                                            gTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATtc                                              >  1:1158544/1‑93 (MQ=255)

                                              tCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATtcgt                                            <  1:5116250/93‑1 (MQ=255)

                                               ccGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATtcgtc                                           <  1:5936656/93‑1 (MQ=255)

                                               ccGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATtcgtc                                           >  1:4174314/1‑93 (MQ=255)

                                                cGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATtcgtcg                                          <  1:429899/93‑1 (MQ=255)

                                                cGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATtcgtcg                                          <  2:5209740/93‑1 (MQ=255)

                                                 ggCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGCTGCACTGAATCTTATTTGTCGc                                         >  1:5774570/1‑93 (MQ=255)

                                                  gCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCa                                        >  1:3450887/1‑93 (MQ=255)

                                                   cATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCAt                                       >  1:2489972/1‑93 (MQ=255)

                                                    aTCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCAtt                                      <  2:2240543/93‑1 (MQ=255)

                                                      cGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCa                                    >  1:804185/1‑93 (MQ=255)

                                                       gAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCAt                                   <  2:2022532/93‑1 (MQ=255)

                                                         aTGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGc                                 <  2:4550600/93‑1 (MQ=255)

                                                         aTGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGc                                 <  1:6011390/93‑1 (MQ=255)

                                                          tGTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGcc                                <  1:2397113/93‑1 (MQ=255)

                                                           gTTACCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCg                               >  2:258088/1‑93 (MQ=255)

                                                              aCCCTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTc                            >  2:3766654/1‑93 (MQ=255)

                                                               cccTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCa                           <  2:1836039/93‑1 (MQ=255)

                                                               cccTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCa                           >  1:525731/1‑93 (MQ=255)

                                                               cccTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGCCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCa                           <  1:2712430/93‑1 (MQ=255)

                                                                ccTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAg                          >  2:102358/1‑93 (MQ=255)

                                                                 cTTATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAgg                         <  2:2850785/93‑1 (MQ=255)

                                                                   tATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAgggg                       <  1:1271288/93‑1 (MQ=255)

                                                                   tATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAgggg                       <  2:3361429/93‑1 (MQ=255)

                                                                   tATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAgggg                       <  2:4064429/93‑1 (MQ=255)

                                                                   tATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAgggg                       >  2:6393825/1‑93 (MQ=255)

                                                                   tATCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAgggg                       <  2:1615993/93‑1 (MQ=255)

                                                                    aTCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGt                      <  2:4368944/93‑1 (MQ=255)

                                                                    aTCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGt                      >  1:5569503/1‑93 (MQ=255)

                                                                    aTCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGt                      <  2:819286/93‑1 (MQ=255)

                                                                    aTCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGt                      <  2:5658618/93‑1 (MQ=255)

                                                                    aTCGCCTGATCTTTAAGGGGGGTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGCTCAggcgc                      >  2:2415202/1‑90 (MQ=255)

                                                                    aTCGCCTGATCTTTAAGGGGGATGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAggggg                      >  2:6329802/1‑92 (MQ=255)

                                                                     tCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTc                     >  1:470997/1‑93 (MQ=255)

                                                                     tCGCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTc                     <  2:424092/93‑1 (MQ=255)

                                                                       gCCTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGc                   <  2:642862/93‑1 (MQ=255)

                                                                        ccTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGcc                  <  2:5350127/93‑1 (MQ=255)

                                                                         cTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGccc                 >  2:3207336/1‑93 (MQ=255)

                                                                         cTGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGccc                 <  2:3025664/93‑1 (MQ=255)

                                                                          tGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCt                <  1:654557/93‑1 (MQ=255)

                                                                          tGATCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTGCAGGGGGCGCCCt                >  1:5210694/1‑93 (MQ=255)

                                                                          tGATCTTTAAGGGGGTTGTCGTGGCTGGTCATTTGCTGATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCt                <  1:2116598/93‑1 (MQ=255)

                                                                             tCTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCtgcg             >  1:2625390/1‑91 (MQ=255)

                                                                              cTTTAAGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTgtgt            <  1:1374472/93‑1 (MQ=255)

                                                                                  aaGGGGGTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTAATGCCGTTCAGGGGTCGCCCTGTGTCGaa        >  2:4908324/1‑93 (MQ=255)

                                                                                    gggggTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAAc      >  1:4066286/1‑93 (MQ=255)

                                                                                    gggggTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAAc      <  2:368786/93‑1 (MQ=255)

                                                                                     ggggTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAAcc     <  2:4697814/93‑1 (MQ=255)

                                                                                     ggggTTGTCGTGCCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAAcc     <  1:874568/93‑1 (MQ=255)

                                                                                      gggTTGTCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAACCt    <  1:3237557/93‑1 (MQ=255)

GTTTTGCGAGGCCTCTTCCCGATTTCTCATCCAGCCGT‑AGCCTGTTCCGGCATCGAATGTTACCCTTATCGCCTGATCTTTAAGGGGGTTATCGTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAACCTGC  >  NC_000913/2928984‑2929163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`