Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,963,770 T→C D97G (GAC→GGC)  lgt ← phosphatidylglycerol‑prolipoprotein diacylglyceryl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,963,7700TC99.3% 507.3 / ‑4.6 150D97G (GAC→GGC) lgtphosphatidylglycerol‑prolipoprotein diacylglyceryl transferase
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (59/90);  total (60/90)
Fisher's exact test for biased strand distribution p-value = 4.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.84e-01

Only 100 of 163 total aligned reads displayed.

CCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGAC  >  NC_000913/2963681‑2963858
                                                                                         |                                                                                        
  tGGAAGAAGGAACGTTTAGTACGGCGGGCGGAGAAAATAATCACCACGATAAAACCAATCAGGCCGCCGCGGGAAGAGATGGCGCCGcccccc                                                                                     >  2:5516332/1‑91 (MQ=255)
   ggAAGAAGGAACGTTTAGTACGGCGGGGGGAGATAAATATCACCACCATAAAACCAATCAAGCCGCCCCGGGAAGAAAAACCGCCGcccccca                                                                                    >  2:4988226/1‑90 (MQ=255)
    gaagaaGGAACGTTTAGTACGGCGGGGGGAGAGAATCATCACCACAATAACGACAATCAGGACGCCGTGGAAAAAGATGCCGCCGccccccac                                                                                   >  2:5294002/1‑89 (MQ=255)
    gaagaaGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGac                                                                                   <  1:2203133/93‑1 (MQ=255)
      agaagGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGacac                                                                                 <  1:1559346/93‑1 (MQ=255)
          ggAACGTTTAGTACGGCGGGGGGAGAAAATTATCACCACCCTAACACCAACCAAGCCGCCGCGGGAAAAAAAGCCGCCGCCCCCGCCACggca                                                                             >  2:659244/1‑91 (MQ=255)
           gAACGTTTAGGCCGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAAc                                                                            <  1:3872078/93‑1 (MQ=255)
            aaCGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACa                                                                           <  1:3614821/93‑1 (MQ=255)
              cGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGa                                                                         <  1:3615586/93‑1 (MQ=255)
              cGTTTAGTACGGCGAGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGa                                                                         <  1:6292821/93‑1 (MQ=255)
               gTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAGCGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGAt                                                                        <  1:2917784/93‑1 (MQ=255)
               gTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGAt                                                                        <  2:4390270/93‑1 (MQ=255)
                tttAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATa                                                                       <  2:402532/93‑1 (MQ=255)
                  tAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACa                                                                     <  1:5642660/93‑1 (MQ=255)
                  tAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCACCGCCCCAGACACGGAACAGATACa                                                                     <  2:2222125/93‑1 (MQ=255)
                   aGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAg                                                                    <  2:2101710/93‑1 (MQ=255)
                     tACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCg                                                                  <  1:5905762/93‑1 (MQ=255)
                      aCGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCgg                                                                 <  2:3650870/93‑1 (MQ=255)
                        ggcgggcgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGAt                                                               <  2:6025670/93‑1 (MQ=255)
                         gcgggcgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATc                                                              <  2:1506992/93‑1 (MQ=255)
                          cgggcgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCg                                                             <  1:5329352/93‑1 (MQ=255)
                          cgggcgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCg                                                             >  1:2003673/1‑93 (MQ=255)
                           gggcgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCgg                                                            >  1:212537/1‑93 (MQ=255)
                            ggcgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGc                                                           >  2:742455/1‑93 (MQ=255)
                             gcgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGcc                                                          >  2:1395334/1‑93 (MQ=255)
                              cgAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCa                                                         >  1:3368937/1‑93 (MQ=255)
                               gAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCAt                                                        <  2:5366776/93‑1 (MQ=255)
                                aaGATAGTCATCACCACGATAACGCCATTCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGACCAGATACAGCGGATCGGCCATa                                                       <  1:728459/93‑1 (MQ=255)
                                aaGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATa                                                       >  2:1759761/1‑93 (MQ=255)
                                aaGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATa                                                       >  1:1217154/1‑93 (MQ=255)
                                aaGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATa                                                       <  2:1875658/93‑1 (MQ=255)
                                aaGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTCGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATa                                                       <  1:3481845/93‑1 (MQ=255)
                                 aGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATaa                                                      >  2:5121943/1‑93 (MQ=255)
                                 aGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATaa                                                      <  1:3633011/93‑1 (MQ=255)
                                  gATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATaaa                                                     <  2:6436402/93‑1 (MQ=255)
                                   aTAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGTCATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAAc                                                    <  2:4480338/93‑1 (MQ=255)
                                   aTAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAAc                                                    <  1:1317278/93‑1 (MQ=255)
                                    tAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACt                                                   <  1:1542909/93‑1 (MQ=255)
                                    tAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACt                                                   >  1:742132/1‑93 (MQ=255)
                                    tAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACt                                                   <  1:3029521/93‑1 (MQ=255)
                                     aaTCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTg                                                  >  2:4645934/1‑93 (MQ=255)
                                        catcaCCACGATAACGCCAATCAGGCCGCGGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCgg                                               <  2:6011288/93‑1 (MQ=255)
                                        catcaCCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCgg                                               <  1:1853575/93‑1 (MQ=255)
                                        catcaCCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCgg                                               >  2:5714119/1‑93 (MQ=255)
                                         atcaCCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCggg                                              >  2:5942035/1‑93 (MQ=255)
                                          tcaCCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGa                                             >  2:4939278/1‑93 (MQ=255)
                                            accacGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGaaa                                           >  2:3362177/1‑93 (MQ=255)
                                            accacGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGaaa                                           >  2:1559298/1‑93 (MQ=255)
                                            accacGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGAATCGGCCATAAACTGCGGGaaa                                           >  2:5628201/1‑93 (MQ=255)
                                             ccacGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAAt                                          >  1:1283591/1‑93 (MQ=255)
                                                cGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGt                                       <  1:1190828/93‑1 (MQ=255)
                                                 gATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTa                                      >  2:4135606/1‑93 (MQ=255)
                                                 gATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTa                                      <  1:2101954/93‑1 (MQ=255)
                                                   tAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTaga                                    <  2:1119884/93‑1 (MQ=255)
                                                    accGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaa                                   <  1:230791/91‑1 (MQ=255)
                                                     aCGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaac                                  >  2:4899167/1‑93 (MQ=255)
                                                      cGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaaca                                 <  2:6131411/93‑1 (MQ=255)
                                                      cGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaaca                                 <  1:4388215/93‑1 (MQ=255)
                                                        ccAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacaga                               >  2:1098338/1‑93 (MQ=255)
                                                        ccAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacaga                               >  2:5868387/1‑93 (MQ=255)
                                                        ccAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaaaaga                               >  1:4036284/1‑93 (MQ=255)
                                                         cAATCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacagaa                              >  1:4350214/1‑93 (MQ=255)
                                                          aaTCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacagaac                             >  1:6457373/1‑93 (MQ=255)
                                                          aaTCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTagaacagaac                             >  2:4193366/1‑93 (MQ=255)
                                                           aTCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAgaacagaaca                            <  1:5865521/93‑1 (MQ=255)
                                                           aTCAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAgaacagaaca                            >  1:2112085/1‑93 (MQ=255)
                                                             cAGGCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATa                          >  2:2932072/1‑93 (MQ=255)
                                                               ggCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAAc                        <  2:6206264/93‑1 (MQ=255)
                                                               ggCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAAc                        <  1:3269844/93‑1 (MQ=255)
                                                               ggCCGCCGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAAc                        <  1:484993/93‑1 (MQ=255)
                                                                gccgccGTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAAcc                       >  1:2485917/1‑93 (MQ=255)
                                                                 ccgccgTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAGTTGTAGAACAGAACATAACCa                      <  1:4090793/93‑1 (MQ=255)
                                                                 ccgccgTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCa                      >  2:5814058/1‑93 (MQ=255)
                                                                 ccgccgTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCa                      >  2:5737359/1‑93 (MQ=255)
                                                                   gccgTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAAt                    <  2:2999566/93‑1 (MQ=255)
                                                                   cccgTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAAt                    <  2:738110/92‑1 (MQ=255)
                                                                   cccgTGAAAAGACATACCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAAt                    <  1:1287685/92‑1 (MQ=255)
                                                                    ccgTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATa                   <  2:2616445/93‑1 (MQ=255)
                                                                      gTGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACg                 >  1:2221779/1‑93 (MQ=255)
                                                                       tGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGt                >  2:3492125/1‑93 (MQ=255)
                                                                       tGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGt                >  1:3814681/1‑93 (MQ=255)
                                                                       tGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGt                <  2:84789/93‑1 (MQ=255)
                                                                       tGGAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGt                <  1:1758218/93‑1 (MQ=255)
                                                                       tGGAAAGACATGCCGCCCCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGt                <  1:4811106/93‑1 (MQ=255)
                                                                        ggAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGGTCGGCCATAAACTGCGGGAAAATGTAGAACAGAACATAACCAATACgcc               >  1:4498209/1‑91 (MQ=255)
                                                                        ggAAAGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTc               <  2:2924014/93‑1 (MQ=255)
                                                                         gAAAGACATGCCACCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTcc              <  2:41406/93‑1 (MQ=255)
                                                                          aaaGACATCCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTccc             <  1:4385050/93‑1 (MQ=255)
                                                                           aaGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTcccc            <  2:3983774/93‑1 (MQ=255)
                                                                           aaGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTcccc            <  2:2447448/93‑1 (MQ=255)
                                                                            aGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTccccc           >  2:1807762/1‑93 (MQ=255)
                                                                            aGACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTccccc           >  1:5263019/1‑93 (MQ=255)
                                                                             gACATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCg          >  1:97609/1‑93 (MQ=255)
                                                                               cATGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAg        >  1:6143340/1‑93 (MQ=255)
                                                                                aTGCCGCCGCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAgg       <  1:1430556/93‑1 (MQ=255)
                                                                                   ccgccgCCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAg    >  1:1004992/1‑93 (MQ=255)
                                                                                     gccgccCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGAc  >  1:3756970/1‑93 (MQ=255)
                                                                                     gccgccCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGAc  <  1:3153010/93‑1 (MQ=255)
                                                                                     gccgccCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGAc  >  1:1121686/1‑93 (MQ=255)
                                                                                     gccgccCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGAGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGAc  <  2:2731659/93‑1 (MQ=255)
                                                                                         |                                                                                        
CCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGCGGGAAATTGTAGAACAGAACATAACCAATACGTCCCCCGAGGAAGAC  >  NC_000913/2963681‑2963858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑