BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,206,988	A→G	T442A (ACC→GCC)	ygjE →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,206,988	0	A	G	99.1%	710.3 / ‑3.1	212	T442A (ACC→GCC)	ygjE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (92/118); total (94/118)
Fisher's exact test for biased strand distribution p-value = 1.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.87e-01

Only 100 of 223 total aligned reads displayed.

GCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCT  >  NC_000913/3206898‑3207076

gcgcTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACgccgcc                                                                                        <  1:1685935/93‑1 (MQ=255)

  gcTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCgg                                                                                      >  2:5456846/1‑93 (MQ=255)

  gcTGGCGAGGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACCCCATACGCCGCCgg                                                                                      <  1:4759618/93‑1 (MQ=255)

   cTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGc                                                                                     >  2:6373836/1‑93 (MQ=255)

    tGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGcc                                                                                    >  2:5006606/1‑93 (MQ=255)

     ggCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGccc                                                                                   <  1:4098983/93‑1 (MQ=255)

     ggCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGccc                                                                                   <  2:4748787/93‑1 (MQ=255)

      gCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGcccc                                                                                  <  1:5929633/93‑1 (MQ=255)

       cGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCa                                                                                 <  2:4105495/93‑1 (MQ=255)

       cGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCa                                                                                 >  1:3761921/1‑93 (MQ=255)

        gATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAg                                                                                >  1:793031/1‑93 (MQ=255)

         aTGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGt                                                                               >  1:6386369/1‑93 (MQ=255)

         aTGCCGGAAACCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGt                                                                               <  1:2903211/93‑1 (MQ=255)

          tGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTc                                                                              <  2:4411077/93‑1 (MQ=255)

          tGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTc                                                                              >  1:3048791/1‑93 (MQ=255)

          tGCCGGAAATCCCGCTGCCGCTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTc                                                                              <  1:3427343/93‑1 (MQ=255)

           gCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTcc                                                                             >  2:6045860/1‑93 (MQ=255)

              ggAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGAt                                                                          >  2:1356901/1‑93 (MQ=255)

              ggAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGAt                                                                          <  2:1928096/93‑1 (MQ=255)

              ggAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGAt                                                                          >  2:131875/1‑93 (MQ=255)

                 aaTCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTta                                                                       >  2:4871759/1‑93 (MQ=255)

                 aaTCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTta                                                                       >  2:3766843/1‑93 (MQ=255)

                 aaTCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTta                                                                       >  2:2680748/1‑93 (MQ=255)

                   tCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTtact                                                                     >  2:3854122/1‑93 (MQ=255)

                   tCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTtact                                                                     >  2:3188723/1‑93 (MQ=255)

                     ccGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTtactac                                                                   <  2:1236/93‑1 (MQ=255)

                      cGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACg                                                                  <  1:5814616/93‑1 (MQ=255)

                       gCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACgg                                                                 >  2:4308134/1‑93 (MQ=255)

                       gCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACgg                                                                 >  1:1880890/1‑93 (MQ=255)

                       gCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACgg                                                                 <  1:284234/93‑1 (MQ=255)

                       gCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACgg                                                                 >  2:2921768/1‑93 (MQ=255)

                          gCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAg                                                              <  1:852085/93‑1 (MQ=255)

                           ccGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAgg                                                             >  1:5396747/1‑92 (MQ=255)

                            cGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTg                                                            <  1:710975/93‑1 (MQ=255)

                            cGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTg                                                            >  2:1778018/1‑93 (MQ=255)

                             ggTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTgg                                                           <  2:4264882/93‑1 (MQ=255)

                              gtgtTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGt                                                          <  1:5131196/93‑1 (MQ=255)

                              gtgtTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGt                                                          >  2:1698395/1‑93 (MQ=255)

                              gtgtTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGt                                                          <  2:4935078/93‑1 (MQ=255)

                                   cTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCt                                                     <  1:6469819/93‑1 (MQ=255)

                                   cTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCt                                                     <  2:1426663/93‑1 (MQ=255)

                                   cTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCt                                                     >  2:3981555/1‑93 (MQ=255)

                                   cTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCt                                                     <  1:2564865/93‑1 (MQ=255)

                                     gCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGc                                                   <  1:1389018/93‑1 (MQ=255)

                                         gATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAAc                                               <  1:1500039/93‑1 (MQ=255)

                                         gATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAAc                                               <  1:1510007/93‑1 (MQ=255)

                                           tggttggtGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAAcgg                                             >  1:6125370/1‑93 (MQ=255)

                                           tggttggtGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAAcgg                                             >  1:2952674/1‑93 (MQ=255)

                                            ggttggtGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAAcggc                                            >  1:1970824/1‑93 (MQ=255)

                                            ggttggtGCGGCAACTGGTCTGGGAATCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAAcggc                                            <  1:960069/93‑1 (MQ=255)

                                              ttggtGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAAcggcgg                                          >  1:3336386/1‑93 (MQ=255)

                                                ggtGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGAt                                        <  1:4785953/93‑1 (MQ=255)

                                                ggtGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGAt                                        <  1:3172009/93‑1 (MQ=255)

                                                ggtGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGAt                                        <  1:206020/93‑1 (MQ=255)

                                                  tGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTa                                      >  2:5267280/1‑93 (MQ=255)

                                                   gCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTAc                                     <  2:1581115/93‑1 (MQ=255)

                                                      gCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTgg                                  <  1:1304120/93‑1 (MQ=255)

                                                      gCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGACAACGGCGGATTACTgg                                  >  2:1032807/1‑93 (MQ=255)

                                                       cAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGc                                 >  1:2503822/1‑93 (MQ=255)

                                                       cAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGc                                 <  2:239800/93‑1 (MQ=255)

                                                        aaTTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCg                                <  2:3223203/93‑1 (MQ=255)

                                                         aTTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGa                               >  2:2829213/1‑93 (MQ=255)

                                                          ttGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGAc                              <  1:4296162/93‑1 (MQ=255)

                                                           tGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACt                             <  2:2145508/93‑1 (MQ=255)

                                                           tGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCAGCCAACGGCGGATTACTGGCGACt                             <  1:5266103/93‑1 (MQ=255)

                                                            ggTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTg                            <  2:3414872/93‑1 (MQ=255)

                                                             gTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTgg                           <  1:6131944/93‑1 (MQ=255)

                                                              tCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggg                          <  1:5217979/93‑1 (MQ=255)

                                                              tCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggg                          >  2:350176/1‑93 (MQ=255)

                                                                tGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggagg                        <  1:4063175/93‑1 (MQ=255)

                                                                 ggggAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGc                       <  2:1546766/93‑1 (MQ=255)

                                                                  gggAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCg                      >  2:864804/1‑93 (MQ=255)

                                                                  gggAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCg                      <  1:2025614/93‑1 (MQ=255)

                                                                   ggAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGa                     <  1:2103157/93‑1 (MQ=255)

                                                                   ggAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGa                     <  1:984943/93‑1 (MQ=255)

                                                                   ggAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGa                     >  1:1791440/1‑93 (MQ=255)

                                                                    gAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGAt                    >  2:3260275/1‑93 (MQ=255)

                                                                    gAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGAt                    >  1:5597953/1‑93 (MQ=255)

                                                                     aGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGAtt                   <  2:830857/93‑1 (MQ=255)

                                                                     aGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGAtt                   >  2:5766905/1‑93 (MQ=255)

                                                                      gCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGAttt                  <  2:5979596/93‑1 (MQ=255)

                                                                       cATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGAtttt                 <  2:2531899/93‑1 (MQ=255)

                                                                       cATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGAtttt                 <  1:6358853/93‑1 (MQ=255)

                                                                         ttCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTg               <  2:5677263/93‑1 (MQ=255)

                                                                         ttCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTg               >  1:1044871/1‑93 (MQ=255)

                                                                          tCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTgg              <  1:5709254/93‑1 (MQ=255)

                                                                            ttACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGc            <  1:5089808/93‑1 (MQ=255)

                                                                             tACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCt           >  1:2961207/1‑93 (MQ=255)

                                                                              acacCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTg          >  2:616761/1‑93 (MQ=255)

                                                                              acacCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTg          >  2:1739263/1‑93 (MQ=255)

                                                                               cacCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGa         <  1:226724/93‑1 (MQ=255)

                                                                               cacCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGa         <  2:2900041/93‑1 (MQ=255)

                                                                                 ccATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGata       >  2:5717241/1‑93 (MQ=255)

                                                                                 ccATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGata       <  2:6084704/93‑1 (MQ=255)

                                                                                  cATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGatat      >  1:3394927/1‑93 (MQ=255)

                                                                                  cATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGatat      <  2:3947818/93‑1 (MQ=255)

                                                                                   aTACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATAtt     >  1:3704660/1‑93 (MQ=255)

                                                                                   aTACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATAtt     <  1:3994916/93‑1 (MQ=255)

                                                                                     aCGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTcc   <  1:3583125/93‑1 (MQ=255)

                                                                                     aCGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTcc   <  2:705238/93‑1 (MQ=255)

GCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCT  >  NC_000913/3206898‑3207076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`