Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,255,425 T→C Y58C (TAC→TGC)  yhaO ← putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,255,4250TC99.5% 728.3 / NA 211Y58C (TAC→TGC) yhaOputative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (114/96);  minor base G (1/0);  total (115/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 211 total aligned reads displayed.

AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGTAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATC  >  NC_000913/3255336‑3255514
                                                                                         |                                                                                         
aaCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAc                                                                                        >  2:469547/1‑93 (MQ=255)
 aCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAcc                                                                                       >  1:1305041/1‑93 (MQ=255)
 aCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAcc                                                                                       <  1:6059582/93‑1 (MQ=255)
 aCCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAAcc                                                                                       <  2:5322398/93‑1 (MQ=255)
  ccGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCa                                                                                      <  2:3231839/93‑1 (MQ=255)
  ccGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCa                                                                                      >  1:2674534/1‑93 (MQ=255)
   cGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCaa                                                                                     >  1:4392457/1‑93 (MQ=255)
   cGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCaa                                                                                     >  2:3801090/1‑93 (MQ=255)
     cTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATc                                                                                   <  2:3358288/93‑1 (MQ=255)
      tAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCa                                                                                  >  1:1494953/1‑93 (MQ=255)
       aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc                                                                                 >  2:4242178/1‑93 (MQ=255)
       aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc                                                                                 <  2:6190893/93‑1 (MQ=255)
       aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc                                                                                 <  2:2437923/93‑1 (MQ=255)
       aaTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAc                                                                                 >  2:6317090/1‑93 (MQ=255)
        aTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAcc                                                                                >  1:1363004/1‑93 (MQ=255)
        aTGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCAcc                                                                                <  2:2613041/93‑1 (MQ=255)
         tGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCg                                                                               <  1:772391/93‑1 (MQ=255)
          gACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGa                                                                              <  2:289283/93‑1 (MQ=255)
           aCGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGAt                                                                             <  1:2343698/93‑1 (MQ=255)
            cGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATg                                                                            <  2:6095782/93‑1 (MQ=255)
             gCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATga                                                                           >  2:4278583/1‑93 (MQ=255)
              cTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATgag                                                                          <  1:3094350/93‑1 (MQ=255)
                 gggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGc                                                                       <  1:2261368/93‑1 (MQ=255)
                 gggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGc                                                                       >  1:2520051/1‑93 (MQ=255)
                 gggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGc                                                                       <  2:2878551/93‑1 (MQ=255)
                  ggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCa                                                                      <  1:910170/93‑1 (MQ=255)
                  ggTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCa                                                                      >  1:5570567/1‑93 (MQ=255)
                     aaTCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCaaaa                                                                   >  1:5871400/1‑93 (MQ=255)
                      aTCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCaaaaa                                                                  >  1:3992482/1‑93 (MQ=255)
                         tttACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATAc                                                               >  2:4920902/1‑93 (MQ=255)
                          ttACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATAcc                                                              >  1:5944855/1‑93 (MQ=255)
                           tACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATAccc                                                             <  2:2062809/93‑1 (MQ=255)
                             cATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGAGGAACCAATCACCGATGAGAGCAAAAATACCcac                                                           >  2:6368678/1‑93 (MQ=255)
                              aTTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCcaca                                                          >  2:6004529/1‑93 (MQ=255)
                               ttCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAACATACCCACaa                                                         >  1:1039851/1‑93 (MQ=255)
                               ttCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCAGGGCACCCAATCACCGATGAGAGCAAAAATACACACaa                                                         >  1:2075696/1‑93 (MQ=255)
                                  tGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATcc                                                      <  2:1575752/93‑1 (MQ=255)
                                  tGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATcc                                                      <  2:1440025/93‑1 (MQ=255)
                                   ggTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATccc                                                     >  2:2496593/1‑93 (MQ=255)
                                   ggTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATccc                                                     >  1:307418/1‑93 (MQ=255)
                                    gTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCa                                                    >  2:1271355/1‑93 (MQ=255)
                                    gTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCa                                                    >  1:4145890/1‑93 (MQ=255)
                                     tGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCAt                                                   <  2:4575331/93‑1 (MQ=255)
                                      gATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATc                                                  <  2:3424784/93‑1 (MQ=255)
                                          cTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAAc                                              <  2:4215156/93‑1 (MQ=255)
                                           tGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAAcc                                             <  1:5515783/93‑1 (MQ=255)
                                           tGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAAcc                                             <  1:1610222/93‑1 (MQ=255)
                                            gCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCg                                            <  2:5546443/93‑1 (MQ=255)
                                              cAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGAc                                          <  2:744134/93‑1 (MQ=255)
                                                gCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCt                                        >  1:351498/1‑93 (MQ=255)
                                                 cGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTg                                       <  2:5034516/93‑1 (MQ=255)
                                                  ctATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCACCCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGc                                      <  2:4022813/92‑1 (MQ=255)
                                                   tATTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCa                                     >  1:5392680/1‑93 (MQ=255)
                                                    aTTAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATAAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAc                                    <  2:2203349/93‑1 (MQ=255)
                                                     ttAATAAACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAcc                                   >  2:1802363/1‑93 (MQ=255)
                                                      taataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCg                                  <  2:2455351/93‑1 (MQ=255)
                                                       aataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCAcccg                                 >  2:787922/1‑91 (MQ=255)
                                                       aataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCgg                                 <  1:3114194/93‑1 (MQ=255)
                                                        ataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCggg                                <  1:4974502/93‑1 (MQ=255)
                                                        ataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCggg                                <  2:2841718/93‑1 (MQ=255)
                                                        ataaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCggg                                <  2:5409145/93‑1 (MQ=255)
                                                         taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga                               <  2:4387228/93‑1 (MQ=255)
                                                         taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga                               <  1:10856/93‑1 (MQ=255)
                                                         taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga                               >  1:4229008/1‑93 (MQ=255)
                                                         taaACAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGga                               >  1:2476114/1‑93 (MQ=255)
                                                          aaaCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGgag                              >  1:3296245/1‑93 (MQ=255)
                                                          aaaCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGgag                              >  1:5534402/1‑93 (MQ=255)
                                                           aaCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGgaga                             >  1:689821/1‑93 (MQ=255)
                                                            aCAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaa                            >  2:3073308/1‑93 (MQ=255)
                                                             cAATCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaaa                           <  2:4491436/93‑1 (MQ=255)
                                                              aaTCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaaaa                          >  1:4692181/1‑93 (MQ=255)
                                                               aTCGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGaaaaa                         >  1:1699502/1‑93 (MQ=255)
                                                                 cGCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACa                       <  1:2288718/93‑1 (MQ=255)
                                                                  gCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACaa                      >  1:3646994/1‑93 (MQ=255)
                                                                  gCTGAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACaa                      >  1:2709344/1‑93 (MQ=255)
                                                                     gAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcc                   <  2:2638215/93‑1 (MQ=255)
                                                                     gAAACAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcc                   >  1:1986644/1‑93 (MQ=255)
                                                                      aaaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATccc                  <  2:5606380/93‑1 (MQ=255)
                                                                       aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc                 >  1:3226455/1‑93 (MQ=255)
                                                                       aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc                 >  2:2305952/1‑93 (MQ=255)
                                                                       aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc                 >  1:4526035/1‑93 (MQ=255)
                                                                       aaCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATcccc                 <  1:6337398/93‑1 (MQ=255)
                                                                        aCAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCcg                >  1:46220/1‑93 (MQ=255)
                                                                         cAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACTGGGAGAAAAACAATCCCcgc               >  2:6427024/1‑93 (MQ=255)
                                                                         cAGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCcgc               >  1:1765003/1‑93 (MQ=255)
                                                                          aGATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCcgcg              >  1:6145996/1‑93 (MQ=255)
                                                                           gATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCgcgc             <  1:2443459/93‑1 (MQ=255)
                                                                           gATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCgcgc             >  1:2303070/1‑93 (MQ=255)
                                                                           gATACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCgcgc             >  1:3643633/1‑93 (MQ=255)
                                                                            aTACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATGCCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGcc            <  2:5780823/93‑1 (MQ=255)
                                                                            aTACATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGcc            >  2:91295/1‑93 (MQ=255)
                                                                              aCATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCaa          <  2:6194790/93‑1 (MQ=255)
                                                                               cATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAAt         <  1:6209137/93‑1 (MQ=255)
                                                                               cATTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAAt         <  2:3497958/93‑1 (MQ=255)
                                                                                aTTGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATc        <  1:4356137/93‑1 (MQ=255)
                                                                                 ttGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCg       >  2:5276080/1‑93 (MQ=255)
                                                                                 ttGCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCg       <  2:2112144/93‑1 (MQ=255)
                                                                                   gCCGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGcc     >  2:3250023/1‑93 (MQ=255)
                                                                                    ccGGGCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCa    >  2:166722/1‑93 (MQ=255)
                                                                                      gggCAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATc  <  1:3010331/93‑1 (MQ=255)
                                                                                         |                                                                                         
AACCGCTAATGACGCTCGGGTAATCTTTACATTCTGGTGATTCTGCCAGCGTATTAATAAACAATCGCTGAAACAGATACATTGCCGGGTAACCAATCACCGATGAGAGCAAAAATACCCACAATCCCATCAAACCGACCTGCACCGGGAGAAAAACAATCCCCGCGCCAATCGCCATC  >  NC_000913/3255336‑3255514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: