Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,461,794 C→T T80I (ACA→ATA)  yheK → putative export protein K

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,461,7940CT99.6% 1018.2 / NA 260T80I (ACA→ATA) yheKputative export protein K
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (121/138);  minor base G (1/0);  total (122/138)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 268 total aligned reads displayed.

CCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGG  >  NC_000913/3461704‑3461883
                                                                                          |                                                                                         
ccGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAatat                                                                                         >  1:937744/1‑93 (MQ=255)
 cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt                                                                                        <  2:1713339/93‑1 (MQ=255)
 cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt                                                                                        >  2:5683906/1‑93 (MQ=255)
 cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt                                                                                        <  1:4789429/93‑1 (MQ=255)
 cGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATAtt                                                                                        <  2:6281795/93‑1 (MQ=255)
  ggAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTa                                                                                       >  2:1190179/1‑93 (MQ=255)
   gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc                                                                                      <  1:6251676/93‑1 (MQ=255)
   gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc                                                                                      >  2:3416636/1‑93 (MQ=255)
   gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc                                                                                      >  1:5468075/1‑93 (MQ=255)
   gAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTAACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTAc                                                                                      >  1:5289978/1‑93 (MQ=255)
    aaaTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACa                                                                                     <  1:4734737/93‑1 (MQ=255)
      aTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAt                                                                                   <  2:1368148/93‑1 (MQ=255)
      aTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAt                                                                                   <  1:5810241/93‑1 (MQ=255)
      aTGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAt                                                                                   <  2:1226565/93‑1 (MQ=255)
       tGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtg                                                                                  <  1:3276695/93‑1 (MQ=255)
       tGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCAAGCTGCCCAACGCCAAATACACACTCACCGCACAAATATTACAAtg                                                                                  >  1:6342533/1‑93 (MQ=255)
         ttCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggc                                                                                >  2:3873918/1‑93 (MQ=255)
          tCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggct                                                                               <  1:4097969/93‑1 (MQ=255)
          tCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggct                                                                               <  2:199369/93‑1 (MQ=255)
           cATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAAtggctg                                                                              >  2:2497197/1‑93 (MQ=255)
              cTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCa                                                                           <  2:2643915/93‑1 (MQ=255)
                tttGAGCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAACCTCTCCGCACAAATATTACAATCGCTGGCaga                                                                         <  1:2617523/93‑1 (MQ=255)
                  tGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAgagg                                                                       >  1:2890772/1‑93 (MQ=255)
                    aTCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAgaggag                                                                     >  1:6115868/1‑93 (MQ=255)
                    aTCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAgaggag                                                                     <  1:3813909/93‑1 (MQ=255)
                     tCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGgaga                                                                    >  2:5295902/1‑93 (MQ=255)
                      cccACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAc                                                                   >  1:2088808/1‑93 (MQ=255)
                        caccaGAGGGCCTTTTATATCTTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGt                                                                 <  1:4591595/93‑1 (MQ=255)
                         accaGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGtt                                                                >  2:4999242/1‑93 (MQ=255)
                         accaGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGtt                                                                >  1:2587518/1‑93 (MQ=255)
                           caGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAc                                                              <  1:3490179/93‑1 (MQ=255)
                             gagGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAccc                                                            >  1:2511306/1‑93 (MQ=255)
                             gagGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAccc                                                            >  2:6075194/1‑93 (MQ=255)
                             gagGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTAccc                                                            >  1:2467554/1‑93 (MQ=255)
                              agGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACACg                                                           >  1:2258623/1‑93 (MQ=255)
                                 gCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGaca                                                        >  2:610781/1‑93 (MQ=255)
                                  ccTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaa                                                       >  1:5987078/1‑93 (MQ=255)
                                   cTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaac                                                      <  2:2260213/93‑1 (MQ=255)
                                   cTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaac                                                      >  2:3016307/1‑93 (MQ=255)
                                    ttttATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGacaaca                                                     >  2:2063631/1‑93 (MQ=255)
                                    ttttATATCGTTCCCTCACGCTGCCCAACGCCAAACACAAACACACCGCACAAAGACTACAATGGCAGGCAGAGGAGACGTTACCCGacaaca                                                     >  2:6472485/1‑93 (MQ=255)
                                         tatCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAg                                                >  1:4211119/1‑93 (MQ=255)
                                          atCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAgg                                               >  1:535915/1‑93 (MQ=255)
                                          atCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAgg                                               >  1:5711535/1‑93 (MQ=255)
                                           tCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGa                                              <  2:54230/93‑1 (MQ=255)
                                            cGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGAc                                             <  2:2967420/93‑1 (MQ=255)
                                             gTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACt                                            <  2:5224151/93‑1 (MQ=255)
                                              ttCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGAAGTTACCCGACAACACCCAGGACTg                                           >  1:4492764/1‑93 (MQ=255)
                                               tCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTgg                                          <  2:1485034/93‑1 (MQ=255)
                                               tCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTgg                                          >  2:5640562/1‑93 (MQ=255)
                                                 ccTCGCGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGCCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCa                                        >  1:996607/1‑93 (MQ=255)
                                                  cTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCAc                                       <  1:6439318/93‑1 (MQ=255)
                                                  cTCACGCTGCCCAACGCAAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCAc                                       <  1:1117558/93‑1 (MQ=255)
                                                   tCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACt                                      <  1:847304/93‑1 (MQ=255)
                                                   tCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACt                                      >  2:4288386/1‑93 (MQ=255)
                                                   tCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACt                                      >  2:702748/1‑93 (MQ=255)
                                                    cACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACGCCCAGGACTGGCACTg                                     <  1:2383561/93‑1 (MQ=255)
                                                    cACGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTg                                     >  2:158389/1‑93 (MQ=255)
                                                     aCGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTgg                                    <  2:1090044/93‑1 (MQ=255)
                                                     aCGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTgg                                    >  1:2130769/1‑93 (MQ=255)
                                                      cGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGa                                   >  2:4919631/1‑93 (MQ=255)
                                                      cGCTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGa                                   >  1:3654426/1‑93 (MQ=255)
                                                        cTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACg                                 >  1:4353772/1‑93 (MQ=255)
                                                        cTGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACg                                 <  1:3211248/93‑1 (MQ=255)
                                                         tGCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACgg                                <  2:5131520/93‑1 (MQ=255)
                                                          gCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGt                               <  1:560769/93‑1 (MQ=255)
                                                          gCCCAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGt                               <  2:443240/93‑1 (MQ=255)
                                                           cccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt                              <  1:4930400/93‑1 (MQ=255)
                                                           cccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt                              <  1:5228723/93‑1 (MQ=255)
                                                           cccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt                              <  2:1116677/93‑1 (MQ=255)
                                                           cccAACGCAAAATACAACCTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGtt                              <  1:5495918/93‑1 (MQ=255)
                                                            ccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTg                             <  2:3709295/93‑1 (MQ=255)
                                                            ccAACGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACCGGACGGTTg                             >  1:3977832/1‑93 (MQ=255)
                                                              aaCGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTc                           <  2:5872378/93‑1 (MQ=255)
                                                              aaCGCCAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTc                           <  2:2770338/93‑1 (MQ=255)
                                                                  ccAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATa                       <  2:1650205/93‑1 (MQ=255)
                                                                  ccAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATa                       <  1:4462741/93‑1 (MQ=255)
                                                                  ccAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATa                       >  1:1705703/1‑93 (MQ=255)
                                                                   cAAATACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATaa                      >  2:843674/1‑93 (MQ=255)
                                                                     aaTACAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAAc                    >  1:794333/1‑93 (MQ=255)
                                                                        aCAAACTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACaaa                 >  1:1403579/1‑93 (MQ=255)
                                                                            aCTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGa             >  2:4326741/1‑93 (MQ=255)
                                                                             cTCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGaa            <  1:1903700/93‑1 (MQ=255)
                                                                              tCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGaaa           >  1:1967902/1‑93 (MQ=255)
                                                                              tCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTCGTCGATAAACAAAACGaaa           >  2:4619898/1‑93 (MQ=255)
                                                                              tCACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGGTGTCGATAAACAAAACGaaa           >  1:102522/1‑93 (MQ=255)
                                                                               cACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAg          <  2:2614508/93‑1 (MQ=255)
                                                                               cACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAg          >  1:892921/1‑93 (MQ=255)
                                                                               cACCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAg          >  2:5319174/1‑93 (MQ=255)
                                                                                aCCGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgt         <  1:4855096/93‑1 (MQ=255)
                                                                                 ccGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgtg        >  2:3953357/1‑93 (MQ=255)
                                                                                 ccGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgtg        >  1:1205802/1‑93 (MQ=255)
                                                                                 ccGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgag        >  1:3941663/1‑91 (MQ=255)
                                                                                  cGCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAgtgt       <  2:914584/93‑1 (MQ=255)
                                                                                  cGCACAAATATGACAATGGCTGTCAGAGGAGACGTTACCCGACAACTCCCAGGACTGGCACTGGACGTTTGTCGATAAACAAAACGAAAgtgt       <  1:1438404/93‑1 (MQ=255)
                                                                                   gCACAAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTc      >  1:357127/1‑93 (MQ=255)
                                                                                     acaAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa    <  1:1860739/93‑1 (MQ=255)
                                                                                     acaAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa    >  2:5076693/1‑93 (MQ=255)
                                                                                     acaAATATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa    >  2:4194794/1‑93 (MQ=255)
                                                                                     acaAAGATGACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGa    <  1:4419295/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGG  >  NC_000913/3461704‑3461883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: