BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,522,805	A→G	Y774C (TAC→TGC)	mrcA →	penicillin‑binding protein 1A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,522,805	0	A	G	100.0%	888.4 / NA	253	Y774C (TAC→TGC)	mrcA	penicillin‑binding protein 1A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (124/129); total (124/129)

Only 100 of 262 total aligned reads displayed.

TGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGC  >  NC_000913/3522715‑3522894

  aCCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGaa                                                                                       <  2:4221055/93‑1 (MQ=255)

   ccTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAg                                                                                      <  2:6277479/93‑1 (MQ=255)

   ccTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAg                                                                                      <  1:3568766/93‑1 (MQ=255)

    cTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAgg                                                                                     >  2:2376641/1‑93 (MQ=255)

     tCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGc                                                                                    >  2:5429624/1‑93 (MQ=255)

     tCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGc                                                                                    >  1:2413327/1‑93 (MQ=255)

      cGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCg                                                                                   <  1:1271825/93‑1 (MQ=255)

       ggTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCgg                                                                                  <  1:3817043/93‑1 (MQ=255)

       ggTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGATGCGAaggagg                                                                                  >  2:186667/1‑93 (MQ=255)

         tCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTg                                                                                >  2:5119347/1‑93 (MQ=255)

         tCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGATg                                                                                <  1:1514132/93‑1 (MQ=255)

           tGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGcc                                                                              <  2:5223993/93‑1 (MQ=255)

            ggATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCa                                                                             >  2:644845/1‑93 (MQ=255)

              aTTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAag                                                                           <  1:3485630/93‑1 (MQ=255)

               ttGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAaga                                                                          <  2:2512391/93‑1 (MQ=255)

               ttGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAaga                                                                          <  1:1158096/93‑1 (MQ=255)

                 ggCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGt                                                                        <  2:4868086/93‑1 (MQ=255)

                 ggCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGt                                                                        <  2:3011714/93‑1 (MQ=255)

                   cTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGc                                                                      <  1:3308953/93‑1 (MQ=255)

                     ttGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGccc                                                                    <  2:574758/93‑1 (MQ=255)

                     ttGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGccc                                                                    >  2:4409850/1‑93 (MQ=255)

                     ttGATGATCACCGTCGTAATCTCGGTCATACAACGGCTGCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGccc                                                                    <  2:1900133/93‑1 (MQ=255)

                      tgatgaTCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCa                                                                   <  1:2566051/93‑1 (MQ=255)

                          gatCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCt                                                               >  1:1670117/1‑93 (MQ=255)

                           atCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTg                                                              >  1:4124294/1‑93 (MQ=255)

                            tCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGc                                                             <  2:6081635/93‑1 (MQ=255)

                            tCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGc                                                             >  2:3555906/1‑93 (MQ=255)

                             cACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCa                                                            >  1:1107993/1‑93 (MQ=255)

                             cACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCa                                                            >  1:435801/1‑93 (MQ=255)

                              aCCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCAt                                                           <  2:5815567/93‑1 (MQ=255)

                              aCCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCAt                                                           <  2:138158/93‑1 (MQ=255)

                               ccGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATg                                                          <  1:2542120/93‑1 (MQ=255)

                               ccGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATg                                                          <  2:1110600/93‑1 (MQ=255)

                               ccGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATg                                                          <  1:2493383/93‑1 (MQ=255)

                                cgtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATgg                                                         >  2:1449213/1‑93 (MQ=255)

                                cgtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATgg                                                         <  2:708010/93‑1 (MQ=255)

                                 gtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATggg                                                        <  1:4746655/93‑1 (MQ=255)

                                 gtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATggg                                                        >  2:2775604/1‑93 (MQ=255)

                                 gtcgtAATCTCGGTCATACAACCGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATggg                                                        >  2:6172365/1‑93 (MQ=255)

                                   cgtAATCTCGGTCATACAACGGCGTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTCCCAAGAGTGCCCAGCCTGCATGGGAc                                                      <  2:2053780/93‑1 (MQ=255)

                                    gtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACg                                                     >  1:5350589/1‑93 (MQ=255)

                                       aTCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCtt                                                  <  1:5162887/93‑1 (MQ=255)

                                         ctcGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTtat                                                <  2:1714372/93‑1 (MQ=255)

                                           cGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTatat                                              >  2:5885580/1‑93 (MQ=255)

                                            ggTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATg                                             >  1:554407/1‑93 (MQ=255)

                                               cATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGaaa                                          >  2:113585/1‑93 (MQ=255)

                                               cATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGaaa                                          >  2:4007077/1‑93 (MQ=255)

                                                aTACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAg                                         >  2:1508231/1‑93 (MQ=255)

                                                 tACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGc                                        <  2:2155919/93‑1 (MQ=255)

                                                    aaCGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGCCGCTTATATGAAAGCCGt                                     >  1:6389373/1‑93 (MQ=255)

                                                    aaCGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGt                                     <  1:2341816/93‑1 (MQ=255)

                                                    aaCGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGt                                     <  1:6059723/93‑1 (MQ=255)

                                                        gCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCtt                                 >  2:2456145/1‑93 (MQ=255)

                                                        gCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCtt                                 <  1:5905715/93‑1 (MQ=255)

                                                         cTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTg                                <  2:6384893/93‑1 (MQ=255)

                                                          ttCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGa                               <  1:4266407/93‑1 (MQ=255)

                                                          ttCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGa                               <  2:4942828/93‑1 (MQ=255)

                                                          ttCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGa                               <  1:5745919/93‑1 (MQ=255)

                                                            ccGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAg                             <  2:457837/93‑1 (MQ=255)

                                                             cGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAgg                            >  1:6339948/1‑93 (MQ=255)

                                                             cGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAgg                            <  2:2231594/93‑1 (MQ=255)

                                                              ggAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGgt                           <  2:3485364/93‑1 (MQ=255)

                                                               gAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGgtg                          <  1:6372358/93‑1 (MQ=255)

                                                               gAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGgtg                          >  2:403786/1‑93 (MQ=255)

                                                               gAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGgtg                          >  1:2032436/1‑93 (MQ=255)

                                                                 gCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGtgtg                        >  1:4511594/1‑93 (MQ=255)

                                                                   gATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGcc                      >  1:2824081/1‑93 (MQ=255)

                                                                   gATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGcc                      <  1:3346571/93‑1 (MQ=255)

                                                                   gATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGcc                      >  2:586912/1‑93 (MQ=255)

                                                                   gATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGcc                      <  1:2164424/93‑1 (MQ=255)

                                                                    aTTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCg                     >  1:5296022/1‑93 (MQ=255)

                                                                    aTTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCg                     <  2:2859015/93‑1 (MQ=255)

                                                                        aaGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagc                 >  1:5009637/1‑93 (MQ=255)

                                                                        aaGATCAGATCTCAGGTGGCGAAGGCGGTGCCAGGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagc                 <  1:5791685/93‑1 (MQ=255)

                                                                          gatcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGCGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagcag               >  1:4595837/1‑93 (MQ=255)

                                                                           atcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagcagc              <  1:2949671/93‑1 (MQ=255)

                                                                           atcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagcagc              <  2:3626528/93‑1 (MQ=255)

                                                                            tcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGcc             <  1:6188522/93‑1 (MQ=255)

                                                                            tcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGcc             >  1:3609101/1‑93 (MQ=255)

                                                                            tcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTCATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGcc             >  1:5383418/1‑93 (MQ=255)

                                                                             cagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCg            >  1:2313668/1‑93 (MQ=255)

                                                                              agatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGc           >  1:1857843/1‑93 (MQ=255)

                                                                              agatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGc           >  2:5632983/1‑93 (MQ=255)

                                                                               gatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCt          >  1:3945991/1‑93 (MQ=255)

                                                                               gatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCt          <  1:5066380/93‑1 (MQ=255)

                                                                               gatcTCAGGTTGCGAACGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCt          >  1:3010193/1‑93 (MQ=255)

                                                                                 tctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGa        <  1:1137723/93‑1 (MQ=255)

                                                                                 tctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGa        >  1:5079949/1‑93 (MQ=255)

                                                                                 tctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGa        <  2:3533089/93‑1 (MQ=255)

                                                                                  ctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAc       <  2:5605695/93‑1 (MQ=255)

                                                                                  ctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAc       >  1:3104940/1‑93 (MQ=255)

                                                                                  ctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAc       >  1:1439687/1‑93 (MQ=255)

                                                                                   tcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcg      >  2:4771180/1‑93 (MQ=255)

                                                                                    cAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgc     >  1:4814953/1‑93 (MQ=255)

                                                                                    cAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgc     <  2:1288846/93‑1 (MQ=255)

                                                                                     aGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgcc    >  1:5715404/1‑93 (MQ=255)

                                                                                     aGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgcc    <  2:1786722/93‑1 (MQ=255)

                                                                                      ggTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgccg   >  1:265177/1‑93 (MQ=255)

                                                                                      ggTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgccg   >  2:3242837/1‑93 (MQ=255)

                                                                                       gTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgccgc  <  2:5363470/93‑1 (MQ=255)

TGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGC  >  NC_000913/3522715‑3522894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`