BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,778,301	T→C	V283A (GTA→GCA)	lldD →	L‑lactate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,778,301	0	T	C	100.0%	896.0 / NA	259	V283A (GTA→GCA)	lldD	L‑lactate dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/132); total (127/132)

Only 100 of 269 total aligned reads displayed.

TCCTCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGC  >  NC_000913/3778211‑3778390

tCCTCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCAc                                                                                         <  1:6459387/93‑1 (MQ=255)

  cTCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActc                                                                                       <  2:924288/93‑1 (MQ=255)

   tCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActct                                                                                      >  2:3578996/1‑93 (MQ=255)

    cGATCCGGAAGATGCGCGCTATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActctc                                                                                     <  1:5733389/93‑1 (MQ=255)

    cGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActctc                                                                                     <  2:3707755/93‑1 (MQ=255)

     gATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActctct                                                                                    >  1:6216696/1‑93 (MQ=255)

     gATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActctct                                                                                    >  1:5557485/1‑93 (MQ=255)

     gATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActctct                                                                                    >  2:4462362/1‑93 (MQ=255)

     gATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCActctct                                                                                    >  1:2745472/1‑93 (MQ=255)

      aTCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCtt                                                                                   >  1:1050422/1‑93 (MQ=255)

      aTCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCtt                                                                                   >  1:3986769/1‑93 (MQ=255)

       tCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTc                                                                                  <  2:185598/93‑1 (MQ=255)

       tCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTc                                                                                  <  1:2115574/93‑1 (MQ=255)

       tCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGATGGACGGTGCACTCTCTTc                                                                                  >  1:6344244/1‑93 (MQ=255)

        ccGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTcc                                                                                 <  2:4718828/93‑1 (MQ=255)

         cGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCg                                                                                >  1:5353141/1‑93 (MQ=255)

          ggAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGc                                                                               >  2:2347252/1‑93 (MQ=255)

           gAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGcc                                                                              >  1:4614554/1‑93 (MQ=255)

           gAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGcc                                                                              >  2:6024644/1‑93 (MQ=255)

              gATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGt                                                                           >  1:5719129/1‑93 (MQ=255)

               aTGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTg                                                                          <  2:1368014/93‑1 (MQ=255)

                     gcgATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCActgc                                                                    <  2:1310264/93‑1 (MQ=255)

                       gATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCActgcct                                                                  <  2:4911274/93‑1 (MQ=255)

                       gATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCActgcct                                                                  >  1:5165284/1‑93 (MQ=255)

                       gATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCActgcct                                                                  <  2:5772245/93‑1 (MQ=255)

                        aTGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCActgcctg                                                                 <  2:5043610/93‑1 (MQ=255)

                         tGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCActggctgc                                                                >  1:2632494/1‑93 (MQ=255)

                            aGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTAt                                                             <  1:2367588/93‑1 (MQ=255)

                            aGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTAt                                                             >  2:3488928/1‑93 (MQ=255)

                            aGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTAt                                                             <  1:969224/93‑1 (MQ=255)

                             gTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTAtt                                                            <  1:5670386/93‑1 (MQ=255)

                              tACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTg                                                           >  1:469505/1‑93 (MQ=255)

                               aCGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGc                                                          <  1:4415967/93‑1 (MQ=255)

                                cGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGcg                                                         >  2:4224540/1‑92 (MQ=255)

                                cGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCa                                                         <  1:4746399/93‑1 (MQ=255)

                                 gTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAg                                                        >  1:1857201/1‑93 (MQ=255)

                                  ttttGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGa                                                       >  1:5008372/1‑93 (MQ=255)

                                   tttGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGAt                                                      <  2:2000013/93‑1 (MQ=255)

                                     tGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGc                                                    <  2:2559860/93‑1 (MQ=255)

                                     tGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGc                                                    <  2:5871153/93‑1 (MQ=255)

                                     tGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATGGCAGATGc                                                    <  1:6264191/93‑1 (MQ=255)

                                      ggTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCg                                                   <  2:5268595/93‑1 (MQ=255)

                                      ggTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCg                                                   <  1:5135479/93‑1 (MQ=255)

                                       gTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCgg                                                  <  1:2991861/93‑1 (MQ=255)

                                       gTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCgg                                                  >  1:1277624/1‑93 (MQ=255)

                                        tGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGt                                                 <  1:2834150/93‑1 (MQ=255)

                                           tGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGaa                                              >  1:2017520/1‑93 (MQ=255)

                                           tGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGaa                                              <  1:3209373/93‑1 (MQ=255)

                                            gATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCGCTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGaaa                                             <  2:3294848/93‑1 (MQ=255)

                                            gATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGaaa                                             <  2:570449/93‑1 (MQ=255)

                                            gATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGaaa                                             >  2:1626416/1‑93 (MQ=255)

                                             agggAATTGTGCTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAg                                            <  1:4920671/91‑1 (MQ=255)

                                             aTGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAg                                            >  1:3370356/1‑93 (MQ=255)

                                             aTGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAg                                            <  2:2593051/93‑1 (MQ=255)

                                              ttgAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAgg                                           <  2:6117133/91‑1 (MQ=255)

                                              tGGAATTGTGGTTTCTAACCACGGTGTCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAgg                                           <  1:4476831/93‑1 (MQ=255)

                                              tGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAgg                                           >  1:5575894/1‑93 (MQ=255)

                                                 aaTTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGa                                        >  2:2779768/1‑93 (MQ=255)

                                                 aaTTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGa                                        <  2:1555049/93‑1 (MQ=255)

                                                  aTTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGat                                       <  1:6122907/93‑1 (MQ=255)

                                                   ttGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGata                                      >  1:117050/1‑93 (MQ=255)

                                                   ttGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGata                                      <  2:1653614/93‑1 (MQ=255)

                                                     gtgGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGAtata                                    >  2:843131/1‑93 (MQ=255)

                                                          ttCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCAt                               <  2:2976721/93‑1 (MQ=255)

                                                          ttCTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCAt                               <  2:3863632/93‑1 (MQ=255)

                                                            cTAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTc                             <  1:3096445/93‑1 (MQ=255)

                                                             tAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCt                            >  2:2065068/1‑93 (MQ=255)

                                                             tAACCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCt                            <  2:2431357/93‑1 (MQ=255)

                                                              aaCCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTg                           >  2:125927/1‑93 (MQ=255)

                                                               aCCACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTgg                          >  1:3578430/1‑93 (MQ=255)

                                                                ccACGGTGGCCGCTAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGc                         <  2:2332959/93‑1 (MQ=255)

                                                                 cACGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCg                        <  2:3892373/93‑1 (MQ=255)

                                                                  aCGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCgg                       >  1:149905/1‑93 (MQ=255)

                                                                  aCGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCgg                       <  2:554201/93‑1 (MQ=255)

                                                                   cGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGa                      <  1:1681717/93‑1 (MQ=255)

                                                                   cGGTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGa                      <  1:4356832/93‑1 (MQ=255)

                                                                    ggTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGAt                     <  1:192040/93‑1 (MQ=255)

                                                                    ggTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGAt                     <  2:3014835/93‑1 (MQ=255)

                                                                     gTGGCCGCCAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATa                    >  1:5540093/1‑93 (MQ=255)

                                                                        gccgccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCg                 >  2:6321474/1‑93 (MQ=255)

                                                                         ccgccAGCTGGAGGGTGCGCTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCgg                <  2:4091279/93‑1 (MQ=255)

                                                                         ccgccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCgg                <  1:4031207/93‑1 (MQ=255)

                                                                          cgccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGa               >  1:218921/1‑93 (MQ=255)

                                                                           gccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCGTTCTGGCGGATAGCGGaa              <  1:841803/93‑1 (MQ=255)

                                                                           gccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGaa              <  2:4519358/93‑1 (MQ=255)

                                                                           gccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGaa              >  2:23097/1‑93 (MQ=255)

                                                                            ccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAAt             >  2:5437316/1‑93 (MQ=255)

                                                                            ccAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAAt             <  2:1236209/93‑1 (MQ=255)

                                                                             cAGCTGGGCGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAAtt            <  1:1581312/93‑1 (MQ=255)

                                                                             cAGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAAtt            >  1:3023243/1‑93 (MQ=255)

                                                                              aGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTc           <  1:4322779/93‑1 (MQ=255)

                                                                              aGCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTc           <  1:692478/93‑1 (MQ=255)

                                                                               gCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCg          >  1:3337857/1‑93 (MQ=255)

                                                                               gCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCg          >  2:112708/1‑93 (MQ=255)

                                                                               gCTGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCg          >  2:6392099/1‑93 (MQ=255)

                                                                                 tGGACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTa        >  1:5840760/1‑93 (MQ=255)

                                                                                   gACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAAc      <  2:4310119/93‑1 (MQ=255)

                                                                                   gACGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAAc      <  2:3104909/93‑1 (MQ=255)

                                                                                    aCGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACg     <  2:5937600/93‑1 (MQ=255)

                                                                                     cGGTGCACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACgg    >  1:5290048/1‑93 (MQ=255)

TCCTCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGC  >  NC_000913/3778211‑3778390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`