BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,840,766	G→A	C243C (TGC→TGT)	yicO ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,840,766	0	G	A	100.0%	805.9 / NA	206	C243C (TGC→TGT)	yicO	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (112/94); total (112/94)

Only 100 of 220 total aligned reads displayed.

GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA  >  NC_000913/3840676‑3840855

gcTCAAATCTACTTCACCAATGACGCCGCTAATTTCAGGCGGAATGGAATAGACGCCGCTAAAATGAAAATCACCGAAAAATAATCAacaaca                                                                                         >  2:1004450/1‑93 (MQ=255)

gcTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCacaaca                                                                                         >  2:1279155/1‑93 (MQ=255)

gcTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATACacaaca                                                                                         >  1:1552144/1‑93 (MQ=255)

 cTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCAcaacaa                                                                                        >  1:5513789/1‑93 (MQ=255)

   cAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGa                                                                                      <  1:2911113/93‑1 (MQ=255)

    aaaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAc                                                                                     >  2:4400354/1‑93 (MQ=255)

    aaaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAc                                                                                     >  2:5264128/1‑93 (MQ=255)

    aaaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGAc                                                                                     >  2:3078976/1‑93 (MQ=255)

     aaTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACg                                                                                    >  1:6042676/1‑93 (MQ=255)

      aTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGt                                                                                   <  1:4594799/93‑1 (MQ=255)

      aTCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGt                                                                                   <  2:2962002/93‑1 (MQ=255)

       tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc                                                                                  <  1:4558812/93‑1 (MQ=255)

       tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc                                                                                  <  2:1457788/93‑1 (MQ=255)

       tCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTc                                                                                  <  2:2732814/93‑1 (MQ=255)

         tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac                                                                                >  1:3854995/1‑93 (MQ=255)

         tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac                                                                                >  2:4693738/1‑93 (MQ=255)

         tACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcac                                                                                <  1:4364856/93‑1 (MQ=255)

          aCTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacc                                                                               <  2:711215/93‑1 (MQ=255)

          aCTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacc                                                                               <  1:3473727/93‑1 (MQ=255)

           cTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTcacca                                                                              >  2:5774390/1‑93 (MQ=255)

              cACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACaa                                                                           <  1:141288/93‑1 (MQ=255)

               aCCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAAt                                                                          >  2:5065746/1‑93 (MQ=255)

                ccAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATa                                                                         <  2:192812/93‑1 (MQ=255)

                ccAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCAAAATa                                                                         >  2:1810344/1‑93 (MQ=255)

                 cAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAg                                                                        >  1:2365910/1‑93 (MQ=255)

                 cAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAg                                                                        >  1:187655/1‑93 (MQ=255)

                  aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa                                                                       >  2:5665145/1‑93 (MQ=255)

                  aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa                                                                       >  1:496707/1‑93 (MQ=255)

                  aaTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGa                                                                       >  1:1652493/1‑93 (MQ=255)

                   aTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGaa                                                                      <  1:3958948/93‑1 (MQ=255)

                   aTGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGaa                                                                      >  1:4526564/1‑93 (MQ=255)

                     gACGCCGCTAATATCAGGCGGAATGGAATAGCCGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAAc                                                                    <  2:1585443/93‑1 (MQ=255)

                     gACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAAc                                                                    <  1:238041/93‑1 (MQ=255)

                       cgccgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCa                                                                  >  1:1526480/1‑93 (MQ=255)

                         ccgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGc                                                                <  1:6432753/93‑1 (MQ=255)

                         ccgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGc                                                                >  1:1461257/1‑93 (MQ=255)

                          cgcTAATATCAGGCGGAATGGAATAGACGCCGCTATAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCTGCa                                                               >  1:3457027/1‑93 (MQ=255)

                          cgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCa                                                               >  2:261366/1‑93 (MQ=255)

                          cgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCa                                                               >  1:5659514/1‑93 (MQ=255)

                          cgcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCa                                                               <  2:777181/93‑1 (MQ=255)

                           gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc                                                              <  2:6276778/93‑1 (MQ=255)

                           gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc                                                              >  2:2930946/1‑93 (MQ=255)

                           gcTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAc                                                              >  1:4264297/1‑93 (MQ=255)

                            cTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAcc                                                             >  1:2049409/1‑93 (MQ=255)

                            cTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAcc                                                             >  1:82955/1‑93 (MQ=255)

                            cTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCAcc                                                             <  2:1537445/93‑1 (MQ=255)

                             tAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcg                                                            >  1:5835652/1‑93 (MQ=255)

                             tAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcg                                                            >  2:6007171/1‑93 (MQ=255)

                              aaTATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgc                                                           >  2:6041483/1‑93 (MQ=255)

                               atgtCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgcg                                                          <  2:3189840/90‑1 (MQ=255)

                               atatCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACcgcg                                                          >  2:1142851/1‑93 (MQ=255)

                                tatCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCgg                                                         >  2:2124512/1‑93 (MQ=255)

                                    aGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATg                                                     >  1:4148287/1‑93 (MQ=255)

                                         gaatggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAAt                                                <  2:6057801/93‑1 (MQ=255)

                                         gaatggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAAAAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGaaaaa                                                >  2:5723808/1‑92 (MQ=255)

                                          aatggaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATg                                               >  1:6206850/1‑93 (MQ=255)

                                              gaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGt                                           >  1:181810/1‑93 (MQ=255)

                                              gaatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGt                                           <  1:1594450/93‑1 (MQ=255)

                                               aatAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtg                                          >  1:2427483/1‑93 (MQ=255)

                                                 tAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgat                                        >  2:1848307/1‑93 (MQ=255)

                                                   gACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgatga                                      <  1:3059220/93‑1 (MQ=255)

                                                   gACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGtgatga                                      >  2:1210253/1‑93 (MQ=255)

                                                     cgccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGaca                                    <  1:4274913/93‑1 (MQ=255)

                                                      gccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGacaa                                   >  2:2557415/1‑93 (MQ=255)

                                                       ccgcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGacaac                                  <  1:6220472/93‑1 (MQ=255)

                                                         gcTAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAacac                                >  2:3898678/1‑93 (MQ=255)

                                                           tAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACgg                              >  1:127959/1‑93 (MQ=255)

                                                           tAAAATGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACgg                              <  1:467536/93‑1 (MQ=255)

                                                            aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt                             <  2:4086467/93‑1 (MQ=255)

                                                            aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt                             >  1:2271199/1‑93 (MQ=255)

                                                            aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt                             >  1:2986633/1‑93 (MQ=255)

                                                            aaaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGt                             <  1:3125824/93‑1 (MQ=255)

                                                             aaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGtt                            <  1:2637373/93‑1 (MQ=255)

                                                             aaaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGtt                            <  2:893530/93‑1 (MQ=255)

                                                              aaTGAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTta                           <  2:3062446/93‑1 (MQ=255)

                                                                 gAACATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCCGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataa                        <  2:4536706/93‑1 (MQ=255)

                                                                  aaCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataat                       <  2:2205295/93‑1 (MQ=255)

                                                                  aaCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataat                       <  1:2847552/93‑1 (MQ=255)

                                                                   aCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataata                      >  1:783821/1‑93 (MQ=255)

                                                                   aCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTataata                      >  1:4918127/1‑93 (MQ=255)

                                                                   aCATCACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACAGCGGCATGACAATGACGTGCTGACAACACGGATataata                      >  1:5324102/1‑93 (MQ=255)

                                                                       cACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaa                  <  1:3604831/93‑1 (MQ=255)

                                                                       cACCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaa                  >  1:1032674/1‑93 (MQ=255)

                                                                        aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa                 <  1:1154934/93‑1 (MQ=255)

                                                                        aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa                 <  2:6462342/93‑1 (MQ=255)

                                                                        aCCGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATaaaaaa                 >  2:4984181/1‑93 (MQ=255)

                                                                         ccGAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAc                <  2:1977430/93‑1 (MQ=255)

                                                                           gAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAccc              >  1:5226707/1‑93 (MQ=255)

                                                                           gAAAAATAATCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAAccc              >  1:18300/1‑93 (MQ=255)

                                                                              aaaTACTCCCCAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaa           <  1:863501/93‑1 (MQ=255)

                                                                                ataatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTaaaa         <  1:128265/93‑1 (MQ=255)

                                                                                 taatCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAAt        >  2:6153388/1‑93 (MQ=255)

                                                                                   atCCACAACAAGACGTCCCCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAc      <  2:478514/93‑1 (MQ=255)

                                                                                    tCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAcc     >  2:5538695/1‑93 (MQ=255)

                                                                                    tCCACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATAcc     <  2:759031/93‑1 (MQ=255)

                                                                                     ccACAACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCt    <  1:1789202/93‑1 (MQ=255)

                                                                                      cacaACAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTa   <  2:2340209/93‑1 (MQ=255)

                                                                                      cacaACAAGACGACACCACAATAGAAACCAGCACCGAAGAATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTa   <  1:5473299/93‑1 (MQ=255)

                                                                                       acaacaAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTaa  >  1:991338/1‑93 (MQ=255)

                                                                                       acaacaAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTaa  <  2:4801718/93‑1 (MQ=255)

GCTCAAATCTACTTCACCAATGACGCCGCTAATATCAGGCGGAATGGAATAGACGCCGCTAAAATGAACATCACCGAAAAATAATCCACAGCAAGACGTCACCACAATAGAAACCAGCACCGCGGCATGAAAATGACGTGATGACAACACGGTTATAATAAAAAACCCTAAAATACCTAA  >  NC_000913/3840676‑3840855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`