BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,857,430	A→G	I105T (ATC→ACC)	yidK ←	putative cotransporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,857,430	0	A	G	100.0%	1008.0 / NA	289	I105T (ATC→ACC)	yidK	putative cotransporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (145/144); total (145/144)

Only 100 of 304 total aligned reads displayed.

GGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATC  >  NC_000913/3857340‑3857519

ggCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtg                                                                                         <  1:4182103/93‑1 (MQ=255)

ggCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtg                                                                                         >  1:1722077/1‑93 (MQ=255)

 gCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtgg                                                                                        <  2:5051592/93‑1 (MQ=255)

  cAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGggtggt                                                                                       <  1:6144631/93‑1 (MQ=255)

   aGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGgtggtg                                                                                      >  2:4769324/1‑93 (MQ=255)

    gAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtggtgg                                                                                     >  2:330888/1‑93 (MQ=255)

    gAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtggtgg                                                                                     >  1:4825145/1‑93 (MQ=255)

       aGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCaa                                                                                  >  2:5506995/1‑93 (MQ=255)

       aGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCaa                                                                                  <  1:1034293/93‑1 (MQ=255)

          aGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGc                                                                               <  2:2560601/93‑1 (MQ=255)

          aGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGc                                                                               >  2:5995942/1‑93 (MQ=255)

          aGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACCCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGc                                                                               >  1:3657523/1‑93 (MQ=255)

            ccGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCcg                                                                             <  1:1916576/92‑1 (MQ=255)

            aCGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCcg                                                                             >  2:4875190/1‑93 (MQ=255)

             cGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCcgc                                                                            <  2:3563980/93‑1 (MQ=255)

               ccGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAAGCGGGGGTGGTGGCAATGCCgcgc                                                                          <  1:5550826/93‑1 (MQ=255)

                cGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCt                                                                         <  2:4650032/93‑1 (MQ=255)

                cGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCt                                                                         <  1:4559358/93‑1 (MQ=255)

                  gTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTc                                                                       <  1:731794/93‑1 (MQ=255)

                  gTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTc                                                                       <  2:1490507/93‑1 (MQ=255)

                   tGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCa                                                                      >  1:13456/1‑93 (MQ=255)

                   tGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCCGGGGTGGTGGCAATGCCGCGCTTcc                                                                      >  1:2775377/1‑92 (MQ=255)

                     gCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGa                                                                    >  1:1508840/1‑93 (MQ=255)

                      cAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGAt                                                                   <  1:4282374/93‑1 (MQ=255)

                       aaTTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATa                                                                  >  1:5441096/1‑93 (MQ=255)

                       aaTTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATa                                                                  >  1:1137901/1‑93 (MQ=255)

                         ttAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAgc                                                                >  1:3422340/1‑93 (MQ=255)

                           aGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAgcgc                                                              >  2:4717281/1‑93 (MQ=255)

                           aGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAgcgc                                                              >  2:4011025/1‑93 (MQ=255)

                            ggAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGcgcg                                                             >  2:106947/1‑93 (MQ=255)

                            ggAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGcgcg                                                             >  1:6288157/1‑93 (MQ=255)

                              aaGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGt                                                           <  1:4090127/93‑1 (MQ=255)

                              aaGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGt                                                           <  2:4550073/93‑1 (MQ=255)

                               aGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTa                                                          >  2:277983/1‑93 (MQ=255)

                               aGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTa                                                          <  1:5977300/93‑1 (MQ=255)

                                gCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaa                                                         >  1:349272/1‑93 (MQ=255)

                                 cAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaaa                                                        >  1:4645972/1‑93 (MQ=255)

                                  aGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaaaa                                                       <  1:3243538/93‑1 (MQ=255)

                                   gAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaaaaa                                                      >  2:2845944/1‑93 (MQ=255)

                                     aGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGa                                                    >  1:2096153/1‑93 (MQ=255)

                                      gTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGAt                                                   >  1:5681287/1‑93 (MQ=255)

                                       tCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGAtt                                                  <  2:4284250/93‑1 (MQ=255)

                                       tCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGAtt                                                  <  2:2730093/93‑1 (MQ=255)

                                        cGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTa                                                 <  1:4501392/93‑1 (MQ=255)

                                         gatgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAg                                                >  1:2209274/1‑93 (MQ=255)

                                         gatgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAg                                                >  1:6396220/1‑93 (MQ=255)

                                          atgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgc                                               <  2:3787017/93‑1 (MQ=255)

                                          atgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgc                                               <  2:5109088/93‑1 (MQ=255)

                                          atgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgc                                               <  2:2225753/93‑1 (MQ=255)

                                           tgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgcg                                              >  2:158891/1‑93 (MQ=255)

                                            gatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgcgc                                             <  2:734797/93‑1 (MQ=255)

                                             ataataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGcgcg                                            <  2:2432635/93‑1 (MQ=255)

                                               aataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAg                                          <  2:5861986/93‑1 (MQ=255)

                                               aataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAg                                          <  2:3750162/93‑1 (MQ=255)

                                               aataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAg                                          >  2:33824/1‑93 (MQ=255)

                                                 taCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGa                                        >  2:5599385/1‑93 (MQ=255)

                                                 taCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGa                                        >  2:4797658/1‑93 (MQ=255)

                                                  aCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGaa                                       <  1:931084/93‑1 (MQ=255)

                                                  aCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGaa                                       <  2:1785030/93‑1 (MQ=255)

                                                      gtcgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATc                                   >  2:4988038/1‑93 (MQ=255)

                                                       tcgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCa                                  >  1:186627/1‑93 (MQ=255)

                                                        cgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAg                                 <  2:1163975/93‑1 (MQ=255)

                                                          ttttATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCg                               <  1:562138/93‑1 (MQ=255)

                                                              aTCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAACGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCAc                           <  1:5221808/93‑1 (MQ=255)

                                                               tCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCAcc                          <  1:4397535/93‑1 (MQ=255)

                                                                 aTAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGc                        >  1:3772562/1‑93 (MQ=255)

                                                                 aTAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGc                        <  2:4603449/93‑1 (MQ=255)

                                                                  tAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCt                       >  1:3036247/1‑93 (MQ=255)

                                                                   aaCGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTg                      <  2:6104331/93‑1 (MQ=255)

                                                                    aCGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGa                     >  2:626075/1‑93 (MQ=255)

                                                                    aCGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGa                     >  1:315730/1‑93 (MQ=255)

                                                                    aCGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGa                     >  2:3173857/1‑93 (MQ=255)

                                                                     cGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGaa                    >  1:1645629/1‑93 (MQ=255)

                                                                       ttCCTCCAGAAAATCGGGGGTCGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGt                  <  2:5311410/93‑1 (MQ=255)

                                                                        tcctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTc                 <  1:2265155/93‑1 (MQ=255)

                                                                        tcctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTc                 <  2:719623/93‑1 (MQ=255)

                                                                        tcctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTc                 <  2:3070089/93‑1 (MQ=255)

                                                                         cctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCa                >  1:4047508/1‑93 (MQ=255)

                                                                            ccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACtt             >  1:2892569/1‑93 (MQ=255)

                                                                             cAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTc            >  1:4934446/1‑93 (MQ=255)

                                                                              aGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTcc           >  2:5680300/1‑93 (MQ=255)

                                                                              aGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTcc           <  2:112432/93‑1 (MQ=255)

                                                                               gAAAATCGGGGGTGGTGGCACTGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc          <  1:1166715/93‑1 (MQ=255)

                                                                               gAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc          <  2:5840604/93‑1 (MQ=255)

                                                                               gAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc          <  2:661068/93‑1 (MQ=255)

                                                                               gAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc          >  2:894405/1‑93 (MQ=255)

                                                                               gAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc          <  1:4011025/93‑1 (MQ=255)

                                                                               gAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc          <  1:5028090/93‑1 (MQ=255)

                                                                                aaaaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCa         >  2:5328135/1‑93 (MQ=255)

                                                                                aaaaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCa         >  2:1970008/1‑93 (MQ=255)

                                                                                  aaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGc       <  1:5858102/93‑1 (MQ=255)

                                                                                  aaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGc       >  2:1863426/1‑93 (MQ=255)

                                                                                  aaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGc       >  2:2296093/1‑93 (MQ=255)

                                                                                   aTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGcc      >  2:4456219/1‑93 (MQ=255)

                                                                                   aTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGcc      >  2:4163306/1‑93 (MQ=255)

                                                                                   aTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGcc      >  1:6070519/1‑93 (MQ=255)

                                                                                   aTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGcc      >  2:1367298/1‑93 (MQ=255)

                                                                                     cGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCa    <  1:2579803/93‑1 (MQ=255)

                                                                                     cGGGGGGGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCa    >  1:667143/1‑93 (MQ=255)

                                                                                       ggggTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATc  >  2:394694/1‑93 (MQ=255)

GGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATC  >  NC_000913/3857340‑3857519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`