BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	406,304	T→C	H34H (CAT→CAC)	yaiA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	406,304	0	T	C	100.0%	575.3 / NA	163	H34H (CAT→CAC)	yaiA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/97); total (66/97)

Only 100 of 177 total aligned reads displayed.

ACCGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTG  >  NC_000913/406214‑406393

aCCGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCAccc                                                                                         <  2:5117227/93‑1 (MQ=255)

aCCGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCAccc                                                                                         <  1:3523647/93‑1 (MQ=255)

aCCGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCAccc                                                                                         <  1:4045038/93‑1 (MQ=255)

aCCGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCAccc                                                                                         >  2:1189409/1‑93 (MQ=255)

 ccGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCt                                                                                        <  1:878020/93‑1 (MQ=255)

   gCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTaa                                                                                      >  1:2083185/1‑93 (MQ=255)

    ccTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTaaa                                                                                     <  1:6427475/93‑1 (MQ=255)

    ccTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTaaa                                                                                     <  2:5767807/93‑1 (MQ=255)

     cTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAAc                                                                                    <  1:4094009/93‑1 (MQ=255)

      ttATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAAcc                                                                                   >  2:1216358/1‑93 (MQ=255)

        aTCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAg                                                                                 >  1:1459915/1‑93 (MQ=255)

         tCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGa                                                                                <  1:797317/93‑1 (MQ=255)

            tCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTc                                                                             >  2:4513861/1‑93 (MQ=255)

              gTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGt                                                                           >  2:2724606/1‑93 (MQ=255)

              gTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGt                                                                           <  2:1869287/93‑1 (MQ=255)

              gTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGt                                                                           <  1:894908/93‑1 (MQ=255)

               tGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGtt                                                                          >  2:3319005/1‑93 (MQ=255)

               tGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGtt                                                                          <  2:1650181/93‑1 (MQ=255)

                gAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTg                                                                         <  2:1851398/93‑1 (MQ=255)

                gAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTg                                                                         >  1:4394465/1‑93 (MQ=255)

                 aaGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGa                                                                        <  1:482811/93‑1 (MQ=255)

                 aaGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGa                                                                        <  1:4470384/93‑1 (MQ=255)

                  aGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAAGCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGAt                                                                       <  2:4170306/93‑1 (MQ=255)

                  aGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGAt                                                                       >  1:3566815/1‑93 (MQ=255)

                   gCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATc                                                                      <  2:6459509/93‑1 (MQ=255)

                   gCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCATAAACCAGACTCGTTGATc                                                                      <  1:6325666/93‑1 (MQ=255)

                     atatatAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAg                                                                    >  2:3395064/1‑93 (MQ=255)

                     atatatAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAg                                                                    <  1:6102341/93‑1 (MQ=255)

                       atataGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTg                                                                  >  2:3625046/1‑93 (MQ=255)

                       atataGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTg                                                                  >  1:1909758/1‑93 (MQ=255)

                        tataGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGa                                                                 >  2:6093785/1‑93 (MQ=255)

                        tataGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGa                                                                 >  1:1722056/1‑93 (MQ=255)

                          taGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAAc                                                               <  2:5657517/93‑1 (MQ=255)

                            gTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACAt                                                             >  1:419106/1‑93 (MQ=255)

                             tGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATc                                                            >  2:4571350/1‑93 (MQ=255)

                             tGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATc                                                            <  2:4133943/93‑1 (MQ=255)

                                cGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGa                                                         <  2:812445/93‑1 (MQ=255)

                                 gATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGAc                                                        <  1:4600232/93‑1 (MQ=255)

                                  aTTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGAcc                                                       <  2:2449515/93‑1 (MQ=255)

                                  aTTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGAcc                                                       >  2:4323769/1‑93 (MQ=255)

                                  aTTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGAcc                                                       <  2:744446/93‑1 (MQ=255)

                                  aTTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGAcc                                                       >  1:111929/1‑93 (MQ=255)

                                    tGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGc                                                     <  2:5476763/93‑1 (MQ=255)

                                    tGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGc                                                     <  1:1110708/93‑1 (MQ=255)

                                      aaaaaGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTc                                                   <  2:5911323/93‑1 (MQ=255)

                                        aaaGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAg                                                 >  2:2973448/1‑93 (MQ=255)

                                         aaGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTCGATCAGTGAACATCCGACCGCTCAgg                                                >  1:5200176/1‑93 (MQ=255)

                                          aGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCTGAGCACCCTAAACCAGACTCGTTGATCAGTGATCATCCGACCGCTCAGGa                                               >  2:3434201/1‑93 (MQ=255)

                                          aGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGa                                               <  1:5982736/93‑1 (MQ=255)

                                           ggAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGaa                                              <  2:884764/93‑1 (MQ=255)

                                           ggAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGaa                                              >  2:5687737/1‑93 (MQ=255)

                                           ggAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGaa                                              <  2:1719372/93‑1 (MQ=255)

                                           ggAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGaa                                              >  1:3779949/1‑93 (MQ=255)

                                            gAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAg                                             <  1:2890257/93‑1 (MQ=255)

                                            gAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAg                                             >  1:3247421/1‑93 (MQ=255)

                                             aaaGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGc                                            <  2:317201/93‑1 (MQ=255)

                                               aGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCga                                          >  1:3682413/1‑93 (MQ=255)

                                               aGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCga                                          >  2:2129507/1‑93 (MQ=255)

                                                 ccAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCgatg                                        <  1:4271726/93‑1 (MQ=255)

                                                  cAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCgatgg                                       >  1:5796412/1‑93 (MQ=255)

                                                   aGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCgatgga                                      <  2:3682037/93‑1 (MQ=255)

                                                   aGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCgatgga                                      >  2:4920316/1‑93 (MQ=255)

                                                    ggACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCgatggat                                     <  1:5131193/93‑1 (MQ=255)

                                                    ggACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCgatggat                                     <  1:711344/93‑1 (MQ=255)

                                                    ggACAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCgatggat                                     >  2:3276956/1‑93 (MQ=255)

                                                      aCAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGc                                   <  1:3413803/93‑1 (MQ=255)

                                                      aCAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGc                                   <  2:1332475/93‑1 (MQ=255)

                                                       cAGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCg                                  >  2:4731028/1‑93 (MQ=255)

                                                        aGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGa                                 <  1:4535177/93‑1 (MQ=255)

                                                        aGACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGa                                 <  2:1505332/93‑1 (MQ=255)

                                                         gACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGaa                                >  2:5806942/1‑93 (MQ=255)

                                                         gACGGTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGaa                                >  1:4214237/1‑93 (MQ=255)

                                                             gTAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGaaaaaa                            <  2:1137678/93‑1 (MQ=255)

                                                              tAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGACCATCAGACCGCTCAGGAAGCGATGGATGCGAAAAAAc                           <  2:5547031/93‑1 (MQ=255)

                                                              tAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAAc                           <  2:5501642/93‑1 (MQ=255)

                                                              tAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAAc                           >  1:227599/1‑93 (MQ=255)

                                                              tAACCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAAc                           <  1:4519469/93‑1 (MQ=255)

                                                              tAACCTGGCACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAAc                           <  1:5899506/93‑1 (MQ=255)

                                                                aCCTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGc                         >  2:4068301/1‑93 (MQ=255)

                                                                 ccTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAACACGCt                        <  2:4132244/93‑1 (MQ=255)

                                                                 ccTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCt                        <  1:876010/93‑1 (MQ=255)

                                                                  cTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTa                       >  1:2614560/1‑93 (MQ=255)

                                                                  cTGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTa                       >  2:5326721/1‑93 (MQ=255)

                                                                   tGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTAt                      >  1:2745885/1‑93 (MQ=255)

                                                                   tGGTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTAt                      <  2:2508054/93‑1 (MQ=255)

                                                                     gTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGa                    <  2:1471597/93‑1 (MQ=255)

                                                                     gTACCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGa                    <  2:5106634/93‑1 (MQ=255)

                                                                       aCCAACTCAGAGCGGATCACCCTAACCCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAgg                  <  1:1375907/93‑1 (MQ=255)

                                                                       aCCAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAgg                  >  1:5790163/1‑93 (MQ=255)

                                                                        ccAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGa                 <  1:5132080/93‑1 (MQ=255)

                                                                         cAACTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGAc                >  2:5226427/1‑93 (MQ=255)

                                                                          aaCTCAGAGCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGAcc               <  2:4381874/93‑1 (MQ=255)

                                                                               agagCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGAc          <  1:2723014/93‑1 (MQ=255)

                                                                                  gCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACaaa       <  2:1084147/93‑1 (MQ=255)

                                                                                  gCCGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACaaa       >  2:6379084/1‑93 (MQ=255)

                                                                                    cGATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAaga     <  2:1316682/93‑1 (MQ=255)

                                                                                     gATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAagag    <  2:2658642/93‑1 (MQ=255)

                                                                                     gATCACCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAagag    <  1:3043377/93‑1 (MQ=255)

                                                                                      atcaccCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGt   <  2:1780273/93‑1 (MQ=255)

                                                                                       tcaccCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTg  <  1:5393824/93‑1 (MQ=255)

ACCGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTG  >  NC_000913/406214‑406393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`