BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,873,986	T→C	T199A (ACG→GCG)	yidA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,873,986	0	T	C	100.0%	1004.7 / NA	285	T199A (ACG→GCG)	yidA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/156); total (129/156)

Only 100 of 290 total aligned reads displayed.

CAATCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGTACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATAC  >  NC_000913/3873896‑3874075

  aTCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCt                                                                                       <  2:1766553/93‑1 (MQ=255)

  aTCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCt                                                                                       <  1:1818008/93‑1 (MQ=255)

  aTCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCt                                                                                       >  2:349581/1‑93 (MQ=255)

   tCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCtt                                                                                      <  2:1728210/93‑1 (MQ=255)

   tCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCtt                                                                                      >  2:1413012/1‑93 (MQ=255)

   tCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCtt                                                                                      >  1:434691/1‑93 (MQ=255)

    cATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCttt                                                                                     <  1:2972896/93‑1 (MQ=255)

    cATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCttt                                                                                     >  2:4365713/1‑93 (MQ=255)

    cATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCttt                                                                                     <  2:4112982/93‑1 (MQ=255)

      ttGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGt                                                                                   >  2:5054971/1‑93 (MQ=255)

      ttGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGt                                                                                   <  1:2862004/93‑1 (MQ=255)

          gATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAAc                                                                               >  1:5059402/1‑93 (MQ=255)

          gATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAAc                                                                               >  1:5863361/1‑93 (MQ=255)

           atatCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAAcg                                                                              >  2:2491076/1‑93 (MQ=255)

             atCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAAcgcg                                                                            >  1:257001/1‑93 (MQ=255)

              tCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGt                                                                           >  2:2123034/1‑93 (MQ=255)

               cGTTTTCCTGATCGCCAATCTCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGtt                                                                          <  2:1659027/93‑1 (MQ=255)

               cGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGtt                                                                          <  1:1325572/93‑1 (MQ=255)

                gTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGttt                                                                         <  2:466710/93‑1 (MQ=255)

                 ttttCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTa                                                                        <  1:596743/93‑1 (MQ=255)

                 ttttCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTa                                                                        >  1:2657954/1‑93 (MQ=255)

                   ttCCTGATCGCCAATCGCCTTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATc                                                                      >  1:6300762/1‑93 (MQ=255)

                   ttCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATc                                                                      >  2:1224574/1‑93 (MQ=255)

                    tCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCg                                                                     >  1:5419161/1‑93 (MQ=255)

                     ccTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGa                                                                    <  2:666688/93‑1 (MQ=255)

                     ccTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGa                                                                    <  1:2404757/93‑1 (MQ=255)

                     ccTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGa                                                                    <  1:1555607/93‑1 (MQ=255)

                      cTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAg                                                                   >  2:2182040/1‑93 (MQ=255)

                        gATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGa                                                                 <  2:5066580/93‑1 (MQ=255)

                          tcgccaatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGAtt                                                               <  2:3295478/93‑1 (MQ=255)

                           cgccaatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGAttt                                                              <  2:3073645/93‑1 (MQ=255)

                           cgccaatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGAttt                                                              <  1:4480121/93‑1 (MQ=255)

                           cgccaatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGAttt                                                              <  1:2294730/93‑1 (MQ=255)

                             ccaatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCg                                                            <  1:121454/93‑1 (MQ=255)

                              caatcgccaTGATTTCTTCCGGTTTAATCCCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGa                                                           <  2:2267486/93‑1 (MQ=255)

                              caatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGa                                                           <  2:932613/93‑1 (MQ=255)

                              caatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGa                                                           <  2:3087806/93‑1 (MQ=255)

                               aatcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAg                                                          <  2:4575900/93‑1 (MQ=255)

                                atcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAgg                                                         >  1:5222227/1‑93 (MQ=255)

                                 tcgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACACCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGa                                                        >  1:2503596/1‑93 (MQ=255)

                                  cgccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGaa                                                       <  2:5489920/93‑1 (MQ=255)

                                   gccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAg                                                      <  1:3496517/93‑1 (MQ=255)

                                   gccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAg                                                      <  2:2909905/93‑1 (MQ=255)

                                    ccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGt                                                     <  1:1070875/93‑1 (MQ=255)

                                    ccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGt                                                     <  1:3901901/93‑1 (MQ=255)

                                    ccaTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGt                                                     >  2:3581534/1‑93 (MQ=255)

                                     caTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTa                                                    >  1:791972/1‑93 (MQ=255)

                                     caTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTa                                                    >  2:3651880/1‑93 (MQ=255)

                                     caTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTa                                                    <  2:2424658/93‑1 (MQ=255)

                                      aTGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTAc                                                   >  1:3196401/1‑93 (MQ=255)

                                        taTTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACgg                                                 <  1:983428/92‑1 (MQ=255)

                                        gATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACgg                                                 >  2:3604513/1‑93 (MQ=255)

                                        gATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACgg                                                 <  1:6185687/93‑1 (MQ=255)

                                         aTTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCTGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGgc                                                <  2:4279385/93‑1 (MQ=255)

                                          tttCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGgcg                                               >  1:3723661/1‑93 (MQ=255)

                                           ttcttcCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGgcgc                                              >  2:1335223/1‑93 (MQ=255)

                                           ttcttcCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGgcgc                                              <  2:4484439/93‑1 (MQ=255)

                                            tcttcCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCa                                             >  1:5318653/1‑93 (MQ=255)

                                             cttcCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCAc                                            >  1:4264577/1‑93 (MQ=255)

                                              ttcCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACt                                           >  1:4996015/1‑93 (MQ=255)

                                              ttcCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACt                                           <  1:461470/93‑1 (MQ=255)

                                                 cGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACtttt                                        <  1:6399608/93‑1 (MQ=255)

                                                 cGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACtttt                                        >  1:717762/1‑93 (MQ=255)

                                                  ggTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTc                                       >  1:5695737/1‑93 (MQ=255)

                                                   gTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCa                                      >  2:5417004/1‑93 (MQ=255)

                                                    tttAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAg                                     <  2:4614696/93‑1 (MQ=255)

                                                     ttAATACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGc                                    <  1:47633/93‑1 (MQ=255)

                                                         tACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACgg                                <  1:1894548/93‑1 (MQ=255)

                                                         tACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACgg                                >  2:1942219/1‑93 (MQ=255)

                                                         tACCTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACgg                                <  1:663068/93‑1 (MQ=255)

                                                           ccTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGta                              >  1:1678208/1‑93 (MQ=255)

                                                           ccTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAAAGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGta                              >  2:3780/1‑93 (MQ=255)

                                                            cTAACACGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGtat                             >  2:2061742/1‑93 (MQ=255)

                                                               acacGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATAtt                          >  1:832866/1‑93 (MQ=255)

                                                                cacGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATAttt                         <  2:6226959/93‑1 (MQ=255)

                                                                 acGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATAtttt                        >  1:3546705/1‑92 (MQ=255)

                                                                 acGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTtc                        >  1:4152534/1‑93 (MQ=255)

                                                                 acGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTtc                        <  1:2112795/93‑1 (MQ=255)

                                                                  cGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTtct                       >  1:2092085/1‑93 (MQ=255)

                                                                  cGTCGGCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTtct                       >  2:2847361/1‑93 (MQ=255)

                                                                      ggCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCttt                   >  2:2691261/1‑93 (MQ=255)

                                                                      ggCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCttt                   >  1:4847510/1‑93 (MQ=255)

                                                                      ggCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCttt                   <  2:3824107/93‑1 (MQ=255)

                                                                       gCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTc                  >  2:221998/1‑93 (MQ=255)

                                                                       gCCAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTc                  >  2:6032578/1‑93 (MQ=255)

                                                                         cAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCAc                <  2:1508539/93‑1 (MQ=255)

                                                                         cAGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCAc                >  2:2014722/1‑93 (MQ=255)

                                                                          aGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACt               >  1:4044251/1‑93 (MQ=255)

                                                                          aGTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACt               <  2:5777224/93‑1 (MQ=255)

                                                                           gTGATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACtt              <  1:3139201/93‑1 (MQ=255)

                                                                             gATTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTcc            <  2:482357/93‑1 (MQ=255)

                                                                              aTTTCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCt           <  1:3364520/93‑1 (MQ=255)

                                                                                ttCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGc         <  2:3947892/93‑1 (MQ=255)

                                                                                 tCACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCg        <  2:487276/93‑1 (MQ=255)

                                                                                  cACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCgg       >  2:2566956/1‑93 (MQ=255)

                                                                                  cACCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCgg       >  2:5868826/1‑93 (MQ=255)

                                                                                   aCCCCCGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGa      >  1:3942487/1‑93 (MQ=255)

                                                                                    cccccGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGaa     >  1:2232106/1‑93 (MQ=255)

                                                                                      cccGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATa   <  1:5587956/93‑1 (MQ=255)

                                                                                       ccGCACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATAc  <  2:3181102/93‑1 (MQ=255)

CAATCATTGCGATATCGTTTTCCTGATCGCCAATCGCCATGATTTCTTCCGGTTTAATACCTAACACGTCGGCCAGTGATTTCACCCCCGTACCTTTGTTAACGCGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATAC  >  NC_000913/3873896‑3874075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`