BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,911,412	A→G	intergenic (‑116/+46)	glmS ← / ← glmU	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase/N‑acetyl glucosamine‑1‑phosphate uridyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,911,412	0	A	G	100.0%	709.9 / NA	201	intergenic (‑116/+46)	glmS/glmU	L‑glutamine:D‑fructose‑6‑phosphate aminotransferase/N‑acetyl glucosamine‑1‑phosphate uridyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (85/116); total (85/116)

Only 100 of 213 total aligned reads displayed.

TGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT  >  NC_000913/3911322‑3911501

 gTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTa                                                                                        >  1:4000826/1‑93 (MQ=255)

  tCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTAt                                                                                       >  1:5057102/1‑93 (MQ=255)

   cGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATg                                                                                      <  2:2067895/93‑1 (MQ=255)

     gTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGtt                                                                                    <  2:3143591/93‑1 (MQ=255)

       cAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGgttatgttat                                                                                  >  2:223481/1‑93 (MQ=255)

       cAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGgttatgttat                                                                                  >  1:1590611/1‑93 (MQ=255)

        aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtc                                                                                 >  2:265382/1‑93 (MQ=255)

        aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtc                                                                                 <  1:4300940/93‑1 (MQ=255)

        aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtc                                                                                 <  1:1360573/93‑1 (MQ=255)

        aaCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGGTATGTTAtc                                                                                 >  2:1221904/1‑93 (MQ=255)

         aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct                                                                                <  2:802428/93‑1 (MQ=255)

         aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct                                                                                >  2:3080443/1‑93 (MQ=255)

         aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct                                                                                <  2:1280348/93‑1 (MQ=255)

         aCCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTAtct                                                                                <  2:2582669/93‑1 (MQ=255)

           cTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATctcc                                                                              <  2:3544953/93‑1 (MQ=255)

           cTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATctcc                                                                              <  1:1160125/93‑1 (MQ=255)

              tATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGTGGATATGTTATCTCCTCa                                                                           >  1:6056353/1‑93 (MQ=255)

               aTGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCAt                                                                          <  2:1820845/93‑1 (MQ=255)

                tGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATc                                                                         >  1:1392269/1‑93 (MQ=255)

                tGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATc                                                                         >  2:5305439/1‑93 (MQ=255)

                tGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATc                                                                         <  1:682508/93‑1 (MQ=255)

                cgCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGCTCTGTTATCTCCTCATc                                                                         >  1:3532042/2‑93 (MQ=255)

                 gCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATcc                                                                        >  2:4485653/1‑93 (MQ=255)

                   ccGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCa                                                                      >  2:4787638/1‑93 (MQ=255)

                   ccGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCa                                                                      >  2:5720220/1‑93 (MQ=255)

                    cGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAt                                                                     >  1:6105286/1‑93 (MQ=255)

                    cGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAt                                                                     >  2:4854315/1‑93 (MQ=255)

                     gTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAtg                                                                    <  2:4167397/93‑1 (MQ=255)

                     gTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAtg                                                                    <  1:1736649/93‑1 (MQ=255)

                      ttttttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCAtgt                                                                   <  1:5488350/93‑1 (MQ=255)

                         tttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGAc                                                                <  2:385593/93‑1 (MQ=255)

                         tttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGAc                                                                <  2:2279236/93‑1 (MQ=255)

                          ttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGAcc                                                               <  2:1347018/93‑1 (MQ=255)

                           tCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCg                                                              <  2:850525/93‑1 (MQ=255)

                            cGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCgg                                                             >  2:303297/1‑93 (MQ=255)

                             gggCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCggg                                                            <  2:3211725/93‑1 (MQ=255)

                              ggCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGt                                                           <  2:4563264/93‑1 (MQ=255)

                               gcgcCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGtt                                                          <  2:4928506/93‑1 (MQ=255)

                                  ccccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGc                                                       >  1:468341/1‑93 (MQ=255)

                                  ccccGAGCCTTGTAGAGAGTGGGGGTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCCTGTGACCGGGCTAGc                                                       >  1:3346943/1‑93 (MQ=255)

                                   cccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGcc                                                      >  2:651620/1‑93 (MQ=255)

                                   cccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGcc                                                      <  2:5687516/93‑1 (MQ=255)

                                    ccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCg                                                     >  1:521221/1‑93 (MQ=255)

                                    ccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCg                                                     <  2:2174319/93‑1 (MQ=255)

                                    ccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCg                                                     >  1:3768030/1‑93 (MQ=255)

                                      gAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGc                                                   >  2:1072312/1‑93 (MQ=255)

                                        gCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCa                                                 >  1:3415657/1‑93 (MQ=255)

                                         ccTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAg                                                <  1:3040416/93‑1 (MQ=255)

                                         ccTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAg                                                >  1:5787253/1‑93 (MQ=255)

                                          cTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGa                                               >  1:5425156/1‑93 (MQ=255)

                                           ttGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGaa                                              <  2:6078882/93‑1 (MQ=255)

                                             gTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATc                                            <  1:1528252/93‑1 (MQ=255)

                                               agagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCAc                                          <  2:4281486/93‑1 (MQ=255)

                                                gagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGTCCGTGTTAGCCGGCCAGAATCACt                                         <  1:2994645/93‑1 (MQ=255)

                                                gagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACt                                         <  1:1457117/93‑1 (MQ=255)

                                                 agagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACtt                                        <  1:272416/93‑1 (MQ=255)

                                                 agagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACtt                                        <  1:2026590/93‑1 (MQ=255)

                                                   agTGGTGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACtttt                                      <  2:2749422/93‑1 (MQ=255)

                                                    gTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACttttt                                     >  1:782524/1‑93 (MQ=255)

                                                    gTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACttttt                                     >  1:365496/1‑93 (MQ=255)

                                                      ggggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCt                                   <  2:5782381/93‑1 (MQ=255)

                                                      ggggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCt                                   <  2:1085672/93‑1 (MQ=255)

                                                       gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt                                  <  1:2393683/93‑1 (MQ=255)

                                                       gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt                                  >  2:4968484/1‑93 (MQ=255)

                                                       gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt                                  >  2:4709204/1‑93 (MQ=255)

                                                        ggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCttt                                 >  1:1095243/1‑93 (MQ=255)

                                                        ggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCttt                                 >  2:5358195/1‑93 (MQ=255)

                                                              ttttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGga                           <  1:3172389/93‑1 (MQ=255)

                                                               tttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgac                          <  1:898839/93‑1 (MQ=255)

                                                               tttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgac                          <  2:3416915/93‑1 (MQ=255)

                                                                ttATAGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacg                         >  2:3504722/1‑93 (MQ=255)

                                                                 tataGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacga                        >  2:5512261/1‑93 (MQ=255)

                                                                  ataGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacgac                       >  1:2575756/1‑93 (MQ=255)

                                                                  ataGTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacgac                       <  1:3209610/93‑1 (MQ=255)

                                                                     gTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGcc                    <  2:1782572/93‑1 (MQ=255)

                                                                     gTTACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGcc                    <  2:5096337/93‑1 (MQ=255)

                                                                      ttACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCa                   >  1:4221496/1‑93 (MQ=255)

                                                                       tACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAg                  <  2:1943767/93‑1 (MQ=255)

                                                                       tACTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAg                  >  2:5541448/1‑93 (MQ=255)

                                                                        aCTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGc                 >  1:5866905/1‑93 (MQ=255)

                                                                         cTGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGcc                <  2:5772007/93‑1 (MQ=255)

                                                                          tGCTTGTGGGAGGGAGGTTATGTTATCTCTTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCct               <  1:763992/93‑1 (MQ=255)

                                                                          tGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCct               <  1:3287683/93‑1 (MQ=255)

                                                                          tGCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCct               <  1:1015215/93‑1 (MQ=255)

                                                                           gCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCctt              >  1:4795749/1‑93 (MQ=255)

                                                                           gCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCctt              <  2:2820699/93‑1 (MQ=255)

                                                                           gCTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCAATTTTTCTTTACCGGACGACGCCAGCctt              >  2:378532/1‑93 (MQ=255)

                                                                            cTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttc             <  1:874505/93‑1 (MQ=255)

                                                                            cTTGTGGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttc             <  1:4454924/93‑1 (MQ=255)

                                                                              tgtgGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttctt           >  1:1914246/1‑93 (MQ=255)

                                                                                tgGGAGGGAGGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttc         <  1:6214991/93‑1 (MQ=255)

                                                                                ggggagggaTGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttc         <  2:5131493/92‑1 (MQ=255)

                                                                                   gagggaggTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGa      <  2:6139534/93‑1 (MQ=255)

                                                                                   gagggaggTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGa      >  1:4415099/1‑93 (MQ=255)

                                                                                    agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAg     >  1:5321315/1‑93 (MQ=255)

                                                                                    agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAg     >  1:3123539/1‑93 (MQ=255)

                                                                                    agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAg     <  1:1952063/93‑1 (MQ=255)

                                                                                    agggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTGCTTTCTGAg     >  1:5158293/1‑93 (MQ=255)

                                                                                     gggagGTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGt    >  2:5277261/1‑93 (MQ=255)

                                                                                       gaggTTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCt  <  2:1567062/93‑1 (MQ=255)

TGTCGGTCAACCTGTATGCCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT  >  NC_000913/3911322‑3911501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`