BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,059,768	A→G	intergenic (+44/‑58)	yihM → / → yihN	hypothetical protein/putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,059,768	0	A	G	100.0%	896.4 / NA	252	intergenic (+44/‑58)	yihM/yihN	hypothetical protein/putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (123/129); total (123/129)

Only 100 of 254 total aligned reads displayed.

TACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTA  >  NC_000913/4059678‑4059856

tactacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTg                                                                                        >  1:1893237/1‑93 (MQ=255)

 actacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTgg                                                                                       >  1:4889927/1‑93 (MQ=255)

  ctacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGt                                                                                      >  1:1326286/1‑93 (MQ=255)

  ctacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGt                                                                                      >  2:4531205/1‑93 (MQ=255)

  ctacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGt                                                                                      <  1:3470681/93‑1 (MQ=255)

  ctacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGt                                                                                      >  2:2900587/1‑93 (MQ=255)

   tacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTc                                                                                     >  2:5179661/1‑93 (MQ=255)

   tacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTc                                                                                     <  1:1563909/93‑1 (MQ=255)

   tacAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTc                                                                                     >  2:1339162/1‑93 (MQ=255)

      aacaaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGt                                                                                  <  2:1117926/93‑1 (MQ=255)

        caaATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTAt                                                                                <  1:844891/93‑1 (MQ=255)

         aaaTCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATc                                                                               >  2:6386868/1‑93 (MQ=255)

         aaaTCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATc                                                                               <  2:716800/93‑1 (MQ=255)

          aaTCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCt                                                                              >  1:4734956/1‑93 (MQ=255)

           aTCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCtt                                                                             <  1:6121594/93‑1 (MQ=255)

            tCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTa                                                                            <  2:4174776/93‑1 (MQ=255)

            tCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTa                                                                            >  1:88224/1‑93 (MQ=255)

            tCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTa                                                                            <  2:4453952/93‑1 (MQ=255)

             cAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTAt                                                                           >  2:4242311/1‑93 (MQ=255)

              aaaCAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTAtt                                                                          >  2:5011433/1‑93 (MQ=255)

              aaaCAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTAtt                                                                          <  1:5406628/93‑1 (MQ=255)

                aCAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGc                                                                        >  2:5144443/1‑93 (MQ=255)

                 cAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGcc                                                                       <  1:2365903/93‑1 (MQ=255)

                 cAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGcc                                                                       <  2:6113638/93‑1 (MQ=255)

                  aaGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCt                                                                      >  2:3256578/1‑93 (MQ=255)

                   agagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCtt                                                                     <  1:6168525/93‑1 (MQ=255)

                   agagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCtt                                                                     <  2:848019/93‑1 (MQ=255)

                   agagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCtt                                                                     <  2:6420428/93‑1 (MQ=255)

                    gagGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCttt                                                                    >  2:1986962/1‑93 (MQ=255)

                     agGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTa                                                                   <  1:4941159/93‑1 (MQ=255)

                       gCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTaaa                                                                 <  2:2114650/93‑1 (MQ=255)

                         aaaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAAc                                                               >  1:2551237/1‑93 (MQ=255)

                         aaaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAAc                                                               <  2:1291064/93‑1 (MQ=255)

                          aaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACa                                                              <  1:4625699/93‑1 (MQ=255)

                          aaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACa                                                              >  2:3961174/1‑93 (MQ=255)

                          aaCCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACa                                                              >  1:4083438/1‑93 (MQ=255)

                            ccATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGt                                                            <  2:1164896/93‑1 (MQ=255)

                            ccATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGt                                                            >  2:3183512/1‑93 (MQ=255)

                            ccATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGt                                                            >  2:4061135/1‑93 (MQ=255)

                             cATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTg                                                           <  2:3459779/93‑1 (MQ=255)

                              aTCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGa                                                          >  1:3320286/1‑93 (MQ=255)

                               tcttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGAt                                                         >  2:4110318/1‑93 (MQ=255)

                               tcttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGAt                                                         >  1:1417580/1‑93 (MQ=255)

                                cttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGAtt                                                        <  2:3568195/93‑1 (MQ=255)

                                 ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGAttt                                                       >  1:5719402/1‑93 (MQ=255)

                                 ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGAttt                                                       <  2:1078952/93‑1 (MQ=255)

                                 ttctGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGAttt                                                       <  1:220576/93‑1 (MQ=255)

                                    tGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTaa                                                    >  1:1500295/1‑93 (MQ=255)

                                        ccACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACCGTGATTTTAAAAAt                                                >  2:5275016/1‑93 (MQ=255)

                                        ccACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAAt                                                <  1:4032634/93‑1 (MQ=255)

                                         cACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATc                                               >  1:1158599/1‑93 (MQ=255)

                                         cACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATc                                               <  2:5765585/93‑1 (MQ=255)

                                          aCTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCg                                              >  2:657883/1‑93 (MQ=255)

                                          aCTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCg                                              >  2:4805070/1‑93 (MQ=255)

                                          aCTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCg                                              >  1:3819462/1‑93 (MQ=255)

                                            taataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCt                                            <  1:2979268/93‑1 (MQ=255)

                                             aataaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCtt                                           >  1:6249547/1‑93 (MQ=255)

                                              ataaGTTTTAACTCATACGCAGTGAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTa                                          <  2:2679751/93‑1 (MQ=255)

                                               taaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAg                                         >  2:4927376/1‑93 (MQ=255)

                                               taaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAg                                         <  2:2457624/93‑1 (MQ=255)

                                               taaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAg                                         <  1:3930172/93‑1 (MQ=255)

                                                aaGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAgg                                        >  1:4257694/1‑93 (MQ=255)

                                                 aGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAggg                                       <  2:3737230/93‑1 (MQ=255)

                                                 aGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAggg                                       <  2:162771/93‑1 (MQ=255)

                                                  gTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAgggg                                      >  2:1767442/1‑93 (MQ=255)

                                                   ttttAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGa                                     <  1:2131270/93‑1 (MQ=255)

                                                     ttACCTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATg                                   <  1:2050214/93‑1 (MQ=255)

                                                     ttAACTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATg                                   <  2:5673425/93‑1 (MQ=255)

                                                       aaCTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGtt                                 >  2:5399993/1‑93 (MQ=255)

                                                         cTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTAt                               <  2:476074/93‑1 (MQ=255)

                                                         cTCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTAt                               <  1:2289660/93‑1 (MQ=255)

                                                          tCATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATg                              <  2:4963372/93‑1 (MQ=255)

                                                           cATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGc                             >  1:2773815/1‑93 (MQ=255)

                                                           cATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGc                             >  1:3864303/1‑93 (MQ=255)

                                                           cATACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGc                             >  2:5280266/1‑93 (MQ=255)

                                                             tACGCAGTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTc                           >  2:5650136/1‑93 (MQ=255)

                                                               cGCAGTTAATAAAACCATTCCATATAAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCAc                         >  1:3555733/1‑93 (MQ=255)

                                                                   gTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGaaa                     >  2:4568934/1‑93 (MQ=255)

                                                                   gTTAATAAAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGaaa                     >  2:2524900/1‑93 (MQ=255)

                                                                     taataaAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGaaaaa                   <  2:4892506/93‑1 (MQ=255)

                                                                       ataaAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGa                 >  2:5202402/1‑93 (MQ=255)

                                                                       ataaAACCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGa                 >  1:5164734/1‑93 (MQ=255)

                                                                          aaaCCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGGTGTTATGCTCACGAAAAAGaaaa              >  2:3912810/1‑92 (MQ=255)

                                                                          aaaCCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAAt              <  2:6171176/93‑1 (MQ=255)

                                                                          aaaCCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAAt              >  2:158810/1‑93 (MQ=255)

                                                                          aaaCCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAAt              <  1:3691578/93‑1 (MQ=255)

                                                                          aaaCCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAAt              >  1:2244439/1‑93 (MQ=255)

                                                                           aaCCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATg             <  1:5366813/93‑1 (MQ=255)

                                                                           aaCCATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATg             >  1:341178/1‑93 (MQ=255)

                                                                             ccATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATggg           <  1:6203183/93‑1 (MQ=255)

                                                                              cATTCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGc          >  2:598/1‑93 (MQ=255)

                                                                                ttCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGt        <  2:3768419/93‑1 (MQ=255)

                                                                                ttCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGt        <  2:2132164/93‑1 (MQ=255)

                                                                                ttCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGt        <  1:5782504/93‑1 (MQ=255)

                                                                                ttCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGt        <  1:299537/93‑1 (MQ=255)

                                                                                ttCCATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGt        >  1:1208365/1‑93 (MQ=255)

                                                                                  ccATATGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTa      <  1:5944860/93‑1 (MQ=255)

                                                                                     tatGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt   >  2:4462743/1‑93 (MQ=255)

                                                                                     tatGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTAttt   <  1:514782/93‑1 (MQ=255)

                                                                                      atGAGTGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTa  <  2:3052069/93‑1 (MQ=255)

TACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAATAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTTAAAAATCGCTTAGGGGATGTTATGCTCACGAAAAAGAAATGGGCGTTATTTA  >  NC_000913/4059678‑4059856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`