BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,288,835	T→C	W261R (TGG→CGG)	nrfD →	formate‑dependent nitrate reductase complex

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,288,835	0	T	C	100.0%	753.4 / NA	218	W261R (TGG→CGG)	nrfD	formate‑dependent nitrate reductase complex
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/102); total (116/102)

Only 100 of 236 total aligned reads displayed.

CTGCTGGTGGCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGTGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTCCTGCC  >  NC_000913/4288745‑4288924

ctgctgGTGGCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACgcgg                                                                                         >  1:3569642/1‑93 (MQ=255)

 tgctgGTGGCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACgcggt                                                                                        >  2:1448733/1‑93 (MQ=255)

 tgctgGTGGCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACgcggg                                                                                        >  1:3751939/1‑92 (MQ=255)

     ggtggCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGtt                                                                                    >  2:278066/1‑93 (MQ=255)

     ggtggCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGtt                                                                                    >  2:305108/1‑93 (MQ=255)

     ggtggCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGtt                                                                                    <  1:21447/93‑1 (MQ=255)

     ggtggCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGtt                                                                                    <  2:4065588/93‑1 (MQ=255)

      gtggCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTc                                                                                   >  2:1942082/1‑93 (MQ=255)

      gtggCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTc                                                                                   <  2:5916069/93‑1 (MQ=255)

      gtggCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTc                                                                                   <  2:2919667/93‑1 (MQ=255)

         gCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTgg                                                                                >  2:1645878/1‑93 (MQ=255)

              ttttGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTgg                                                                           >  1:1269838/1‑93 (MQ=255)

              ttttGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTgg                                                                           >  2:707518/1‑93 (MQ=255)

               tttGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGgt                                                                          >  2:5689645/1‑93 (MQ=255)

                  gTCGGTCTGGCGGTGGGCGATCACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTc                                                                       <  1:1899322/93‑1 (MQ=255)

                  gTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTCGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTc                                                                       >  2:139270/1‑93 (MQ=255)

                     ggTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGcc                                                                    >  2:1828676/1‑93 (MQ=255)

                       tCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgg                                                                  <  2:122184/93‑1 (MQ=255)

                       tCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgg                                                                  <  2:6365999/93‑1 (MQ=255)

                        cTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCggg                                                                 >  2:2128056/1‑93 (MQ=255)

                        cTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTCGGTGTCGCCggg                                                                 <  1:4904673/93‑1 (MQ=255)

                         tGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggc                                                                >  2:5107359/1‑93 (MQ=255)

                          ggCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggct                                                               >  2:434800/1‑93 (MQ=255)

                           gcgcTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggctg                                                              <  1:2711800/93‑1 (MQ=255)

                            cgcTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggctgg                                                             <  2:4645985/93‑1 (MQ=255)

                            cgcTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggctgg                                                             <  2:6050271/93‑1 (MQ=255)

                            cgcTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggctgg                                                             <  2:5298571/93‑1 (MQ=255)

                            cgcTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggctgg                                                             <  1:6100783/93‑1 (MQ=255)

                               tGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggctggggc                                                          >  1:5111002/1‑93 (MQ=255)

                                gggCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCgggctggggct                                                         >  1:1736853/1‑93 (MQ=255)

                                  gCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGa                                                       >  1:3946425/1‑93 (MQ=255)

                                  gCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGa                                                       >  1:2008050/1‑93 (MQ=255)

                                    gATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGAtt                                                     >  2:2743870/1‑93 (MQ=255)

                                    gATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGAtt                                                     >  1:2748434/1‑93 (MQ=255)

                                     aTGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATtg                                                    >  1:6208566/1‑93 (MQ=255)

                                     aTGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATtg                                                    >  1:2035827/1‑93 (MQ=255)

                                     aTGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATtg                                                    >  1:949431/1‑93 (MQ=255)

                                       gACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATtgtg                                                  <  1:5475961/93‑1 (MQ=255)

                                          ggTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCa                                               >  1:5606747/1‑93 (MQ=255)

                                          ggTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCa                                               >  2:2011110/1‑93 (MQ=255)

                                          ggTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCa                                               <  1:2913457/93‑1 (MQ=255)

                                           gTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCaa                                              <  2:5578508/93‑1 (MQ=255)

                                            tAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAt                                             <  1:4730287/93‑1 (MQ=255)

                                             aaaGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtg                                            >  2:3827616/1‑93 (MQ=255)

                                             aaaGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtg                                            <  2:4123596/93‑1 (MQ=255)

                                             aaaGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtg                                            >  2:881833/1‑93 (MQ=255)

                                              aaGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtgc                                           <  2:3936428/93‑1 (MQ=255)

                                              aaGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtgc                                           <  2:5458851/93‑1 (MQ=255)

                                              aaGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtgc                                           >  1:1208161/1‑93 (MQ=255)

                                               aGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGCTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGGCAAtgct                                          >  1:2287299/1‑93 (MQ=255)

                                                gTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtgctg                                         >  1:2954440/1‑93 (MQ=255)

                                                gTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtgctg                                         >  2:1990384/1‑93 (MQ=255)

                                                gTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAAtgctg                                         >  1:1480787/1‑93 (MQ=255)

                                                    gTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCa                                     >  2:2112794/1‑93 (MQ=255)

                                                     tGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCaa                                    >  2:2641142/1‑93 (MQ=255)

                                                       cgcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAc                                  >  2:1558683/1‑93 (MQ=255)

                                                       cgcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAc                                  <  1:4081310/93‑1 (MQ=255)

                                                       cgcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAc                                  <  1:4629045/93‑1 (MQ=255)

                                                       cgcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAc                                  >  1:210830/1‑93 (MQ=255)

                                                       cgcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAc                                  <  1:6025236/93‑1 (MQ=255)

                                                        gcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAcc                                 >  2:4692810/1‑93 (MQ=255)

                                                        gcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAcc                                 >  2:1082122/1‑93 (MQ=255)

                                                        gcTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAAcc                                 >  1:4424059/1‑93 (MQ=255)

                                                         cTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCg                                <  1:1791529/93‑1 (MQ=255)

                                                          tggtggCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGt                               <  2:3423957/93‑1 (MQ=255)

                                                          tggtggCGGCATGAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGt                               >  1:5150624/1‑93 (MQ=255)

                                                           ggtggCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTg                              <  2:6117096/93‑1 (MQ=255)

                                                           ggtggCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTg                              >  2:4858656/1‑93 (MQ=255)

                                                           ggtggCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTg                              >  2:6181839/1‑93 (MQ=255)

                                                            gtggCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTgg                             >  2:2789811/1‑93 (MQ=255)

                                                            gtggCGGCATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTgg                             >  1:661042/1‑93 (MQ=255)

                                                               gcggcATTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTc                          <  2:4494851/93‑1 (MQ=255)

                                                                    aTTAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCg                     >  2:5443448/1‑93 (MQ=255)

                                                                     ttAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGc                    >  2:5281545/1‑93 (MQ=255)

                                                                     ttAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGc                    >  2:4765655/1‑93 (MQ=255)

                                                                     ttAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGc                    >  2:4652527/1‑93 (MQ=255)

                                                                      tAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCa                   <  1:3067058/93‑1 (MQ=255)

                                                                      tAGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCa                   <  2:1284946/93‑1 (MQ=255)

                                                                       aGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAg                  <  2:2306792/93‑1 (MQ=255)

                                                                       aGGTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAg                  >  2:2492945/1‑93 (MQ=255)

                                                                        ggTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGt                 >  1:4429986/1‑93 (MQ=255)

                                                                         gTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGtt                <  2:6257725/93‑1 (MQ=255)

                                                                         gTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGtt                >  1:2367504/1‑93 (MQ=255)

                                                                         gTGGCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGtt                <  2:1901214/93‑1 (MQ=255)

                                                                           ggCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTcc              >  2:5881569/1‑93 (MQ=255)

                                                                            gcgcTTCCTGGACGCGGTGTTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCg             <  1:4288459/93‑1 (MQ=255)

                                                                            gCGGTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCg             <  1:1990921/93‑1 (MQ=255)

                                                                               gTTTCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCa          <  2:2234652/93‑1 (MQ=255)

                                                                                tttCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCAt         >  1:1154158/1‑93 (MQ=255)

                                                                                tttCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCAt         <  2:3570858/93‑1 (MQ=255)

                                                                                 ttCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCAtt        >  1:2613531/1‑93 (MQ=255)

                                                                                  tCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTc       <  1:5431986/93‑1 (MQ=255)

                                                                                  tCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTc       >  1:1398213/1‑93 (MQ=255)

                                                                                  tCTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTc       <  1:1301597/93‑1 (MQ=255)

                                                                                   cTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTcc      <  2:2366884/93‑1 (MQ=255)

                                                                                   cTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTcc      <  1:3221338/93‑1 (MQ=255)

                                                                                   cTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTcc      <  1:5840341/93‑1 (MQ=255)

                                                                                   cTGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTcc      <  1:2417265/93‑1 (MQ=255)

                                                                                    tGGACGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTCCt     >  2:5409740/1‑93 (MQ=255)

                                                                                       aCGCGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTCCTGcc  >  2:6413418/1‑93 (MQ=255)

CTGCTGGTGGCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGTGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTCCTGCC  >  NC_000913/4288745‑4288924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`